Gene annotation
Transcriptome id Sobic.003G371000.3,Sobic.003G371000.2,Sobic.003G371000.1
Synonym Sb03g041190
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide transporter, putative, expressed
UniProt A0A1W0W0Q9 , C5XR95 , A0A1W0W0R6
Pfam PF07690
Panther DB PTHR11654 PTHR11654:SF151
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22540 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g65100.1 : peptide transporter, putative, expressed
MaizeGDB (Corn) Zm00025a037322 , Zm00025a033786 , Zm00025a026649 , Zm00025a005044 , Zm00025a043863 , Zm00025a039549
Brachypodium KQK10813 , KQK06086 , KQK06085 , KQK06084 , KQK10814 , KQK10821 , PNT73273 , KQK24132 , KQK06087 , KQK10815
Barley HORVU3Hr1G082460.1 , HORVU3Hr1G082490.1 , HORVU3Hr1G082490.2 , HORVU3Hr1G082460.2 , HORVU3Hr1G082490.4 , HORVU3Hr1G082490.5 , HORVU3Hr1G082460.7 , HORVU3Hr1G082490.7 , HORVU3Hr1G082460.9 , HORVU3Hr1G082460.8 , HORVU3Hr1G082580.10 , HORVU3Hr1G082580.11 , HORVU3Hr1G082580.12 , HORVU3Hr1G082580.13 , HORVU3Hr1G082300.5 , HORVU3Hr1G082580.8 , HORVU3Hr1G082580.9 , HORVU3Hr1G082580.2 , HORVU3Hr1G082580.3 , HORVU3Hr1G082580.1 , HORVU3Hr1G082580.6 , HORVU3Hr1G082580.7 , HORVU3Hr1G082580.4 , HORVU3Hr1G082580.5 , HORVU1Hr1G074550.6 , HORVU1Hr1G074550.7 , HORVU1Hr1G074550.4 , HORVU1Hr1G074550.5 , HORVU1Hr1G074550.2 , HORVU1Hr1G074550.3 , HORVU1Hr1G074550.1 , HORVU1Hr1G074550.8 , HORVU1Hr1G074550.9 , HORVU3Hr1G082460.10 , HORVU3Hr1G082360.6 , HORVU3Hr1G082360.7 , HORVU3Hr1G082360.4 , HORVU3Hr1G082360.5 , HORVU3Hr1G082360.2 , HORVU3Hr1G082360.3 , HORVU3Hr1G082360.8 , HORVU1Hr1G053990.10 , HORVU1Hr1G074490.3 , HORVU1Hr1G074490.2 , HORVU1Hr1G074490.1 , HORVU1Hr1G074490.7 , HORVU1Hr1G074490.6 , HORVU1Hr1G074490.5 , HORVU1Hr1G074490.4 , HORVU1Hr1G074490.9 , HORVU1Hr1G074490.8 , HORVU3Hr1G082300.8 , HORVU3Hr1G082300.4 , HORVU3Hr1G082300.6 , HORVU3Hr1G082300.7 , HORVU3Hr1G082300.3 , HORVU1Hr1G074550.10 , HORVU1Hr1G053990.1 , HORVU1Hr1G053990.2 , HORVU1Hr1G053990.5 , HORVU1Hr1G053990.4 , HORVU1Hr1G053990.7 , HORVU1Hr1G053990.6 , HORVU1Hr1G053990.9 , HORVU1Hr1G053990.8 , HORVU3Hr1G082460.3 , HORVU3Hr1G082490.3 , HORVU3Hr1G082460.5 , HORVU3Hr1G082460.4 , HORVU3Hr1G082460.6 , HORVU1Hr1G074450.7 , HORVU1Hr1G074450.6 , HORVU1Hr1G074450.5 , HORVU1Hr1G074450.3 , HORVU1Hr1G074450.2 , HORVU1Hr1G074450.1 , HORVU1Hr1G074450.8 , HORVU1Hr1G074490.10
Wheat TraesCS3A02G382200 , TraesCS3A02G382200 , TraesCS3B02G415600 , TraesCS4B02G057000 , TraesCS7B02G040100 , TraesCS1B02G280000 , TraesCS3A02G383200 , TraesCS4B02G375800 , TraesCS3A02G382300 , TraesCS1D02G269600 , TraesCS3B02G415000 , TraesCS1A02G269600 , TraesCS3B02G414800 , TraesCS1A02G269400 , TraesCS1A02G269400 , TraesCS2B02G626100 , TraesCS7D02G139600 , TraesCS3D02G375900 , TraesCS3B02G414900 , TraesCS1D02G269500 , TraesCS1B02G280100 , TraesCS1B02G279900 , TraesCS3B02G415200 , TraesCS3D02G375800 , TraesCS2B02G626600 , TraesCS3A02G382900 , TraesCS3D02G375700 , TraesCS1A02G269500 , TraesCS2B02G248000 , TraesCS3B02G414800 , TraesCS5A02G537100 , TraesCS1B02G225000 , TraesCS3B02G304500 , TraesCS3A02G382100 , TraesCS4D02G361500 , TraesCS1D02G269700 , TraesCS3D02G376200
Populus -


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cDNA sequences
Sobic.003G371000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G229100 receptor-like kinase, putative, expressed -
2 Sobic.003G287200 WRKY23, expressed -
3 Sobic.006G183900 cytochrome P450, putative, expressed -
4 Sobic.002G318200 expressed protein -
5 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
6 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
7 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.007G090472 - -
9 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
10 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
11 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
12 Sobic.003G087700 glycosyltransferase protein, putative, expressed -
13 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
16 Sobic.002G163200 - -
17 Sobic.005G041300 amino acid permease family protein, putative, expressed -
18 Sobic.010G096700 leaf senescence related protein, putative, expressed -
19 Sobic.001G506600 exostosin family domain containing protein, expressed -
20 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase


Gene co-expression network
sample Sobic003G371000 Sobic003G371000 Sobic006G229100 Sobic006G229100 Sobic003G371000--Sobic006G229100 Sobic003G287200 Sobic003G287200 Sobic003G371000--Sobic003G287200 Sobic006G183900 Sobic006G183900 Sobic003G371000--Sobic006G183900 Sobic002G318200 Sobic002G318200 Sobic003G371000--Sobic002G318200 Sobic006G117500 Sobic006G117500 Sobic003G371000--Sobic006G117500 Sobic005G149600 Sobic005G149600 Sobic003G371000--Sobic005G149600 Sobic005G089200 Sobic005G089200 Sobic003G371000--Sobic005G089200 Sobic007G090472 Sobic007G090472 Sobic003G371000--Sobic007G090472 Sobic004G126700 Sobic004G126700 Sobic003G371000--Sobic004G126700 Sobic006G229100--Sobic007G090472 Sobic010G082000 Sobic010G082000 Sobic006G229100--Sobic010G082000 Sobic005G115300 Sobic005G115300 Sobic006G229100--Sobic005G115300 Sobic001G360500 Sobic001G360500 Sobic006G229100--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic006G229100--Sobic001G503000 Sobic006G229100--Sobic003G287200 Sobic010G096700 Sobic010G096700 Sobic006G229100--Sobic010G096700 Sobic006G135300 Sobic006G135300 Sobic006G229100--Sobic006G135300 Sobic001G149400 Sobic001G149400 Sobic006G229100--Sobic001G149400 Sobic003G287200--Sobic006G183900 Sobic003G287200--Sobic006G229100 Sobic001G002800 Sobic001G002800 Sobic003G287200--Sobic001G002800 Sobic003G287200--Sobic001G360500 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic003G287200--Sobic010G096700 Sobic007G170300 Sobic007G170300 Sobic003G287200--Sobic007G170300 Sobic003G287200--Sobic006G117500 Sobic006G183900--Sobic003G287200 Sobic007G109600 Sobic007G109600 Sobic006G183900--Sobic007G109600 Sobic006G028400 Sobic006G028400 Sobic006G183900--Sobic006G028400 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic006G183900--Sobic007G170300 Sobic002G365600 Sobic002G365600 Sobic006G183900--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic006G183900--Sobic002G365500 Sobic002G318200--Sobic001G360500 Sobic003G203600 Sobic003G203600 Sobic002G318200--Sobic003G203600 Sobic002G318200--Sobic006G183900 Sobic002G216100 Sobic002G216100 Sobic002G318200--Sobic002G216100 Sobic005G046700 Sobic005G046700 Sobic002G318200--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic002G318200--Sobic007G165400 Sobic002G318200--Sobic006G229100 Sobic002G404100 Sobic002G404100 Sobic002G318200--Sobic002G404100 Sobic004G139300 Sobic004G139300 Sobic002G318200--Sobic004G139300 Sobic005G104200 Sobic005G104200 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic001G506600 Sobic001G506600 Sobic006G117500--Sobic001G506600 Sobic009G015166 Sobic009G015166 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic005G149600--Sobic005G089200 Sobic005G149600--Sobic004G108800 Sobic001G026300 Sobic001G026300 Sobic005G149600--Sobic001G026300 Sobic003G015200 Sobic003G015200 Sobic005G149600--Sobic003G015200 Sobic005G149600--Sobic006G117500 Sobic004G156250 Sobic004G156250 Sobic005G149600--Sobic004G156250 Sobic005G152500 Sobic005G152500 Sobic005G149600--Sobic005G152500 Sobic007G156800 Sobic007G156800 Sobic005G149600--Sobic007G156800 Sobic004G034200 Sobic004G034200 Sobic005G149600--Sobic004G034200 Sobic005G089200--Sobic005G149600 Sobic005G089200--Sobic004G108800 Sobic005G089200--Sobic001G026300 Sobic005G089200--Sobic005G152500 Sobic005G089200--Sobic003G015200 Sobic005G089200--Sobic006G117500 Sobic010G170300 Sobic010G170300 Sobic005G089200--Sobic010G170300 Sobic005G089200--Sobic007G156800 Sobic005G089200--Sobic004G034200 Sobic010G028100 Sobic010G028100 Sobic007G090472--Sobic010G028100 Sobic007G073000 Sobic007G073000 Sobic007G090472--Sobic007G073000 Sobic007G090472--Sobic001G360500 Sobic007G090472--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic007G090472--Sobic006G092700 Sobic007G090472--Sobic006G135300 Sobic007G090472--Sobic006G229100 Sobic007G090472--Sobic001G503000 Sobic003G215300 Sobic003G215300 Sobic007G090472--Sobic003G215300 Sobic004G126700--Sobic003G287200 Sobic004G126700--Sobic001G026300 Sobic004G126700--Sobic005G089200 Sobic004G126700--Sobic010G170300 Sobic004G126700--Sobic006G183900 Sobic004G126700--Sobic006G229100 Sobic004G126700--Sobic008G034700 Sobic004G126700--Sobic005G149600 Sobic001G108000 Sobic001G108000 Sobic004G126700--Sobic001G108000
Octagon: transcription factors


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