Gene annotation
Transcriptome id Sobic.003G402500.1
Synonym XRI, Sb03g043860, XRI1
Functional annotation expressed protein
UniProt C5XG87
Pfam -
Panther DB PTHR33385 PTHR33385:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48720 : x-ray induced transcript 1
RAP-DB (Rice) LOC_Os01g68930.1 : expressed protein
MaizeGDB (Corn) Zm00025a026287
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G201900 tRNA-splicing endonuclease positive effector-related, putative, expressed -
2 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
3 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
4 Sobic.001G085700 STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.004G053300 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
6 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
7 Sobic.001G321900 CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed -
8 Sobic.007G207600 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
9 Sobic.002G205900 receptor-like protein kinase 2 precursor, putative, expressed -
10 Sobic.001G518400 EF hand family protein, putative, expressed -
11 Sobic.003G177800 tetratricopeptide repeat containing protein, putative, expressed -
12 Sobic.003G445700 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
13 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
14 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
15 Sobic.009G000400 expressed protein -
16 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
17 Sobic.005G196950 - -
18 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
19 Sobic.003G153000 galactosyltransferase family protein, putative, expressed -
20 Sobic.001G282300 expressed protein -


Gene co-expression network
sample Sobic003G402500 Sobic003G402500 Sobic006G201900 Sobic006G201900 Sobic003G402500--Sobic006G201900 Sobic008G000800 Sobic008G000800 Sobic003G402500--Sobic008G000800 Sobic003G277900 Sobic003G277900 Sobic003G402500--Sobic003G277900 Sobic001G085700 Sobic001G085700 Sobic003G402500--Sobic001G085700 Sobic004G053300 Sobic004G053300 Sobic003G402500--Sobic004G053300 Sobic001G494100 Sobic001G494100 Sobic003G402500--Sobic001G494100 Sobic001G321900 Sobic001G321900 Sobic003G402500--Sobic001G321900 Sobic007G207600 Sobic007G207600 Sobic003G402500--Sobic007G207600 Sobic002G205900 Sobic002G205900 Sobic003G402500--Sobic002G205900 Sobic006G201900--Sobic003G402500 Sobic003G223800 Sobic003G223800 Sobic006G201900--Sobic003G223800 Sobic006G199700 Sobic006G199700 Sobic006G201900--Sobic006G199700 Sobic002G019750 Sobic002G019750 Sobic006G201900--Sobic002G019750 Sobic003G435400 Sobic003G435400 Sobic006G201900--Sobic003G435400 Sobic006G201900--Sobic001G494100 Sobic005G216800 Sobic005G216800 Sobic006G201900--Sobic005G216800 Sobic003G392550 Sobic003G392550 Sobic006G201900--Sobic003G392550 Sobic009G000400 Sobic009G000400 Sobic006G201900--Sobic009G000400 Sobic010G229000 Sobic010G229000 Sobic008G000800--Sobic010G229000 Sobic008G000800--Sobic004G053300 Sobic010G139301 Sobic010G139301 Sobic008G000800--Sobic010G139301 Sobic006G068400 Sobic006G068400 Sobic008G000800--Sobic006G068400 Sobic003G432900 Sobic003G432900 Sobic008G000800--Sobic003G432900 Sobic009G013100 Sobic009G013100 Sobic008G000800--Sobic009G013100 Sobic004G227500 Sobic004G227500 Sobic008G000800--Sobic004G227500 Sobic001G305400 Sobic001G305400 Sobic008G000800--Sobic001G305400 Sobic008G000800--Sobic003G277900 Sobic003G277900--Sobic004G053300 Sobic005G159600 Sobic005G159600 Sobic003G277900--Sobic005G159600 Sobic003G277900--Sobic001G494100 Sobic006G046600 Sobic006G046600 Sobic003G277900--Sobic006G046600 Sobic003G277900--Sobic008G000800 Sobic008G086200 Sobic008G086200 Sobic003G277900--Sobic008G086200 Sobic009G123500 Sobic009G123500 Sobic003G277900--Sobic009G123500 Sobic001G315400 Sobic001G315400 Sobic003G277900--Sobic001G315400 Sobic007G187400 Sobic007G187400 Sobic003G277900--Sobic007G187400 Sobic001G518400 Sobic001G518400 Sobic001G085700--Sobic001G518400 Sobic006G180700 Sobic006G180700 Sobic001G085700--Sobic006G180700 Sobic006G138000 Sobic006G138000 Sobic001G085700--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G085700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic001G085700--Sobic001G170100 Sobic007G056700 Sobic007G056700 Sobic001G085700--Sobic007G056700 Sobic010G275500 Sobic010G275500 Sobic001G085700--Sobic010G275500 Sobic009G074700 Sobic009G074700 Sobic001G085700--Sobic009G074700 Sobic001G267900 Sobic001G267900 Sobic001G085700--Sobic001G267900 Sobic004G053300--Sobic003G277900 Sobic004G053300--Sobic008G000800 Sobic004G053300--Sobic005G159600 Sobic008G099500 Sobic008G099500 Sobic004G053300--Sobic008G099500 Sobic004G053300--Sobic001G494100 Sobic003G445900 Sobic003G445900 Sobic004G053300--Sobic003G445900 Sobic004G053300--Sobic004G227500 Sobic004G054200 Sobic004G054200 Sobic004G053300--Sobic004G054200 Sobic004G053300--Sobic008G086200 Sobic001G494100--Sobic006G046600 Sobic008G169400 Sobic008G169400 Sobic001G494100--Sobic008G169400 Sobic005G204100 Sobic005G204100 Sobic001G494100--Sobic005G204100 Sobic001G494100--Sobic004G227500 Sobic001G494100--Sobic003G277900 Sobic006G262100 Sobic006G262100 Sobic001G494100--Sobic006G262100 Sobic002G216600 Sobic002G216600 Sobic001G494100--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic001G494100--Sobic004G199700 Sobic001G494100--Sobic001G315400 Sobic003G398400 Sobic003G398400 Sobic001G321900--Sobic003G398400 Sobic009G122500 Sobic009G122500 Sobic001G321900--Sobic009G122500 Sobic001G193100 Sobic001G193100 Sobic001G321900--Sobic001G193100 Sobic001G335000 Sobic001G335000 Sobic001G321900--Sobic001G335000 Sobic001G308400 Sobic001G308400 Sobic001G321900--Sobic001G308400 SobicK028600 SobicK028600 Sobic001G321900--SobicK028600 Sobic004G084500 Sobic004G084500 Sobic001G321900--Sobic004G084500 Sobic002G147100 Sobic002G147100 Sobic001G321900--Sobic002G147100 Sobic010G074900 Sobic010G074900 Sobic001G321900--Sobic010G074900 Sobic004G043600 Sobic004G043600 Sobic007G207600--Sobic004G043600 Sobic003G112600 Sobic003G112600 Sobic007G207600--Sobic003G112600 Sobic003G402900 Sobic003G402900 Sobic007G207600--Sobic003G402900 Sobic007G207600--Sobic003G392550 Sobic007G207600--Sobic001G335000 Sobic001G012900 Sobic001G012900 Sobic007G207600--Sobic001G012900 Sobic004G060300 Sobic004G060300 Sobic007G207600--Sobic004G060300 Sobic007G207600--Sobic001G193100 Sobic003G043800 Sobic003G043800 Sobic007G207600--Sobic003G043800 Sobic003G161700 Sobic003G161700 Sobic002G205900--Sobic003G161700 Sobic009G157500 Sobic009G157500 Sobic002G205900--Sobic009G157500 Sobic001G262900 Sobic001G262900 Sobic002G205900--Sobic001G262900 Sobic007G037301 Sobic007G037301 Sobic002G205900--Sobic007G037301 Sobic002G205900--Sobic008G000800 Sobic002G224450 Sobic002G224450 Sobic002G205900--Sobic002G224450 Sobic003G429500 Sobic003G429500 Sobic002G205900--Sobic003G429500 Sobic002G205900--Sobic006G068400 Sobic004G121000 Sobic004G121000 Sobic002G205900--Sobic004G121000
Octagon: transcription factors


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