Gene annotation
Transcriptome id Sobic.003G445700.1
Synonym Sb03g047510
Functional annotation methyltransferase domain containing protein, putative, expressed
UniProt C5XJF7
Pfam PF01209
Panther DB PTHR10108:SF24 PTHR10108
NCBI CDD KOG1540; Ubiquinone biosynthesis methyltransferase COQ5
KEGG Orthology K06127; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G57300 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g74520.1 : methyltransferase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039031 , Zm00025a052818
Brachypodium KQK11825 , KQK11826
Barley -
Wheat TraesCS2A02G499500
Populus -


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cDNA sequences
Sobic.003G445700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G402500 expressed protein -
2 Sobic.004G180000 OsSPL15 - SBP-box gene family member, expressed -
3 Sobic.002G396300 OsDegp7 - Putative Deg protease homologue, expressed -
4 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
5 Sobic.010G134600 pentatricopeptide, putative, expressed -
6 Sobic.003G392550 - -
7 Sobic.009G122500 expressed protein -
8 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
9 Sobic.005G090200 - -
10 Sobic.004G088450 - K17302: COPB2, coatomer subunit beta'
11 Sobic.007G213000 beta 1,2-xylosyltransferase, putative, expressed K03714: glycoprotein 2-beta-D-xylosyltransferase
12 Sobic.003G334900 - -
13 Sobic.006G142400 suppressor of stem-loop protein 1, putative, expressed K03142: TFIIH2, GTF2H2, transcription initiation factor TFIIH subunit 2
14 Sobic.002G279500 NTMC2Type1.2 protein, putative, expressed -
15 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
16 Sobic.001G085700 STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
17 Sobic.010G112600 integral membrane protein, putative, expressed -
18 Sobic.004G134700 drought induced 19 protein, putative, expressed -
19 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
20 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K


Gene co-expression network
sample Sobic003G445700 Sobic003G445700 Sobic003G402500 Sobic003G402500 Sobic003G445700--Sobic003G402500 Sobic004G180000 Sobic004G180000 Sobic003G445700--Sobic004G180000 Sobic002G396300 Sobic002G396300 Sobic003G445700--Sobic002G396300 Sobic010G068900 Sobic010G068900 Sobic003G445700--Sobic010G068900 Sobic010G134600 Sobic010G134600 Sobic003G445700--Sobic010G134600 Sobic003G392550 Sobic003G392550 Sobic003G445700--Sobic003G392550 Sobic009G122500 Sobic009G122500 Sobic003G445700--Sobic009G122500 Sobic003G409900 Sobic003G409900 Sobic003G445700--Sobic003G409900 Sobic005G090200 Sobic005G090200 Sobic003G445700--Sobic005G090200 Sobic006G201900 Sobic006G201900 Sobic003G402500--Sobic006G201900 Sobic008G000800 Sobic008G000800 Sobic003G402500--Sobic008G000800 Sobic003G277900 Sobic003G277900 Sobic003G402500--Sobic003G277900 Sobic001G085700 Sobic001G085700 Sobic003G402500--Sobic001G085700 Sobic004G053300 Sobic004G053300 Sobic003G402500--Sobic004G053300 Sobic001G494100 Sobic001G494100 Sobic003G402500--Sobic001G494100 Sobic001G321900 Sobic001G321900 Sobic003G402500--Sobic001G321900 Sobic007G207600 Sobic007G207600 Sobic003G402500--Sobic007G207600 Sobic002G205900 Sobic002G205900 Sobic003G402500--Sobic002G205900 Sobic004G180033 Sobic004G180033 Sobic004G180000--Sobic004G180033 Sobic009G005100 Sobic009G005100 Sobic004G180000--Sobic009G005100 Sobic004G180066 Sobic004G180066 Sobic004G180000--Sobic004G180066 Sobic003G153000 Sobic003G153000 Sobic004G180000--Sobic003G153000 Sobic004G294800 Sobic004G294800 Sobic004G180000--Sobic004G294800 Sobic003G439501 Sobic003G439501 Sobic004G180000--Sobic003G439501 Sobic004G180000--Sobic002G396300 Sobic010G056000 Sobic010G056000 Sobic004G180000--Sobic010G056000 Sobic002G336800 Sobic002G336800 Sobic004G180000--Sobic002G336800 Sobic002G398700 Sobic002G398700 Sobic002G396300--Sobic002G398700 Sobic002G092050 Sobic002G092050 Sobic002G396300--Sobic002G092050 Sobic004G171200 Sobic004G171200 Sobic002G396300--Sobic004G171200 Sobic001G466500 Sobic001G466500 Sobic002G396300--Sobic001G466500 Sobic003G014700 Sobic003G014700 Sobic002G396300--Sobic003G014700 Sobic002G364900 Sobic002G364900 Sobic002G396300--Sobic002G364900 Sobic002G396300--Sobic004G180000 Sobic002G344500 Sobic002G344500 Sobic002G396300--Sobic002G344500 Sobic005G012700 Sobic005G012700 Sobic002G396300--Sobic005G012700 Sobic002G172500 Sobic002G172500 Sobic010G068900--Sobic002G172500 Sobic004G256900 Sobic004G256900 Sobic010G068900--Sobic004G256900 Sobic006G262800 Sobic006G262800 Sobic010G068900--Sobic006G262800 Sobic010G190900 Sobic010G190900 Sobic010G068900--Sobic010G190900 Sobic004G241000 Sobic004G241000 Sobic010G068900--Sobic004G241000 Sobic006G069100 Sobic006G069100 Sobic010G068900--Sobic006G069100 Sobic006G085900 Sobic006G085900 Sobic010G068900--Sobic006G085900 Sobic003G184300 Sobic003G184300 Sobic010G068900--Sobic003G184300 Sobic001G478900 Sobic001G478900 Sobic010G068900--Sobic001G478900 Sobic010G134650 Sobic010G134650 Sobic010G134600--Sobic010G134650 Sobic006G054233 Sobic006G054233 Sobic010G134600--Sobic006G054233 Sobic009G252300 Sobic009G252300 Sobic010G134600--Sobic009G252300 Sobic007G069101 Sobic007G069101 Sobic010G134600--Sobic007G069101 Sobic002G054200 Sobic002G054200 Sobic010G134600--Sobic002G054200 Sobic010G277700 Sobic010G277700 Sobic010G134600--Sobic010G277700 Sobic001G257800 Sobic001G257800 Sobic010G134600--Sobic001G257800 Sobic001G065200 Sobic001G065200 Sobic010G134600--Sobic001G065200 Sobic010G112600 Sobic010G112600 Sobic010G134600--Sobic010G112600 Sobic003G392550--Sobic009G122500 Sobic003G346400 Sobic003G346400 Sobic003G392550--Sobic003G346400 Sobic003G036500 Sobic003G036500 Sobic003G392550--Sobic003G036500 Sobic001G012900 Sobic001G012900 Sobic003G392550--Sobic001G012900 Sobic003G392550--Sobic001G085700 Sobic004G254800 Sobic004G254800 Sobic003G392550--Sobic004G254800 Sobic001G335000 Sobic001G335000 Sobic003G392550--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic003G392550--Sobic004G060300 Sobic002G115500 Sobic002G115500 Sobic003G392550--Sobic002G115500 Sobic009G122500--Sobic001G335000 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic006G106300 Sobic006G106300 Sobic003G409900--Sobic006G106300 Sobic003G409900--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G409900--Sobic006G060000 Sobic003G409900--Sobic009G122500 Sobic003G021600 Sobic003G021600 Sobic003G409900--Sobic003G021600 Sobic003G409900--Sobic010G223400 Sobic003G409900--Sobic004G254800 Sobic001G015400 Sobic001G015400 Sobic003G409900--Sobic001G015400 Sobic009G128500 Sobic009G128500 Sobic003G409900--Sobic009G128500 Sobic003G117800 Sobic003G117800 Sobic005G090200--Sobic003G117800 Sobic003G394500 Sobic003G394500 Sobic005G090200--Sobic003G394500 Sobic008G055500 Sobic008G055500 Sobic005G090200--Sobic008G055500 Sobic001G057400 Sobic001G057400 Sobic005G090200--Sobic001G057400 Sobic005G090200--Sobic010G112600 Sobic005G090200--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic005G090200--Sobic004G350700 Sobic003G402800 Sobic003G402800 Sobic005G090200--Sobic003G402800 Sobic005G185500 Sobic005G185500 Sobic005G090200--Sobic005G185500
Octagon: transcription factors


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