Gene annotation
Transcriptome id Sobic.002G396300.1
Synonym DegP10, Sb02g041140
Functional annotation OsDegp7 - Putative Deg protease homologue, expressed
UniProt C5X400
Pfam PF13180 PF13365
Panther DB PTHR22939 PTHR22939:SF87
NCBI CDD KOG1320; Serine protease
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G36950 : DegP protease 10
RAP-DB (Rice) LOC_Os05g34460.1 : OsDegp7 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a043712
Brachypodium KQK06237 , PNT71253 , KQK06239 , PNT71254 , KQK06238
Barley HORVU1Hr1G064600.19 , HORVU1Hr1G064600.18 , HORVU1Hr1G064600.13 , HORVU1Hr1G064600.12 , HORVU1Hr1G064600.11 , HORVU1Hr1G064600.10 , HORVU1Hr1G064600.17 , HORVU1Hr1G064600.16 , HORVU1Hr1G064600.15 , HORVU1Hr1G064600.14 , HORVU1Hr1G064600.22 , HORVU1Hr1G064600.23 , HORVU1Hr1G064600.20 , HORVU1Hr1G064600.21 , HORVU1Hr1G064600.26 , HORVU1Hr1G064600.27 , HORVU1Hr1G064600.24 , HORVU1Hr1G064600.25 , HORVU1Hr1G064600.9 , HORVU1Hr1G064600.8 , HORVU1Hr1G064600.3 , HORVU1Hr1G064600.2 , HORVU1Hr1G064600.1 , HORVU1Hr1G064600.7 , HORVU1Hr1G064600.6 , HORVU1Hr1G064600.5 , HORVU1Hr1G064600.4
Wheat TraesCS1B02G270700 , TraesCS1A02G260200 , TraesCS1A02G260200 , TraesCS1D02G260100 , TraesCS1D02G260100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G398700 tim44-like domain containing protein, expressed K17426: large subunit ribosomal protein L45
2 Sobic.002G092050 - -
3 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
4 Sobic.001G466500 PPR repeat containing protein, expressed -
5 Sobic.003G014700 pentatricopeptide, putative, expressed -
6 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
7 Sobic.004G180000 OsSPL15 - SBP-box gene family member, expressed -
8 Sobic.002G344500 pentatricopeptide, putative, expressed K18213: proteinaceous RNase P
9 Sobic.005G012700 expressed protein -
10 Sobic.010G091400 AAA-type ATPase family protein, putative, expressed -
11 Sobic.001G384400 glucosyltransferase, putative, expressed K03848: alpha-1,3-glucosyltransferase
12 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
13 Sobic.005G059500 expressed protein -
14 Sobic.009G213200 PPR repeat domain containing protein, putative, expressed -
15 Sobic.005G026400 pentatricopeptide repeat domain containing protein, putative, expressed -
16 Sobic.009G251200 expressed protein -
17 Sobic.002G001400 pentatricopeptide containing protein, putative, expressed -
18 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
19 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
20 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31


Gene co-expression network
sample Sobic002G396300 Sobic002G396300 Sobic002G398700 Sobic002G398700 Sobic002G396300--Sobic002G398700 Sobic002G092050 Sobic002G092050 Sobic002G396300--Sobic002G092050 Sobic004G171200 Sobic004G171200 Sobic002G396300--Sobic004G171200 Sobic001G466500 Sobic001G466500 Sobic002G396300--Sobic001G466500 Sobic003G014700 Sobic003G014700 Sobic002G396300--Sobic003G014700 Sobic002G364900 Sobic002G364900 Sobic002G396300--Sobic002G364900 Sobic004G180000 Sobic004G180000 Sobic002G396300--Sobic004G180000 Sobic002G344500 Sobic002G344500 Sobic002G396300--Sobic002G344500 Sobic005G012700 Sobic005G012700 Sobic002G396300--Sobic005G012700 Sobic003G304400 Sobic003G304400 Sobic002G398700--Sobic003G304400 Sobic006G106300 Sobic006G106300 Sobic002G398700--Sobic006G106300 Sobic010G091400 Sobic010G091400 Sobic002G398700--Sobic010G091400 Sobic001G015400 Sobic001G015400 Sobic002G398700--Sobic001G015400 Sobic002G150700 Sobic002G150700 Sobic002G398700--Sobic002G150700 Sobic005G026400 Sobic005G026400 Sobic002G398700--Sobic005G026400 Sobic002G408900 Sobic002G408900 Sobic002G398700--Sobic002G408900 Sobic002G386600 Sobic002G386600 Sobic002G398700--Sobic002G386600 Sobic002G398700--Sobic002G364900 Sobic002G378100 Sobic002G378100 Sobic002G092050--Sobic002G378100 Sobic006G128400 Sobic006G128400 Sobic002G092050--Sobic006G128400 Sobic006G193300 Sobic006G193300 Sobic002G092050--Sobic006G193300 Sobic008G038600 Sobic008G038600 Sobic002G092050--Sobic008G038600 Sobic002G092050--Sobic004G171200 Sobic006G125900 Sobic006G125900 Sobic002G092050--Sobic006G125900 Sobic007G097400 Sobic007G097400 Sobic002G092050--Sobic007G097400 Sobic001G501400 Sobic001G501400 Sobic002G092050--Sobic001G501400 Sobic002G238000 Sobic002G238000 Sobic002G092050--Sobic002G238000 Sobic008G051200 Sobic008G051200 Sobic004G171200--Sobic008G051200 Sobic002G298100 Sobic002G298100 Sobic004G171200--Sobic002G298100 Sobic001G434200 Sobic001G434200 Sobic004G171200--Sobic001G434200 Sobic010G059500 Sobic010G059500 Sobic004G171200--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G171200--Sobic001G493200 Sobic001G120500 Sobic001G120500 Sobic004G171200--Sobic001G120500 Sobic009G239200 Sobic009G239200 Sobic004G171200--Sobic009G239200 Sobic006G155100 Sobic006G155100 Sobic004G171200--Sobic006G155100 Sobic004G171200--Sobic007G097400 Sobic001G466500--Sobic002G398700 Sobic001G466500--Sobic005G026400 Sobic001G466500--Sobic010G091400 Sobic001G466500--Sobic002G364900 Sobic001G466500--Sobic002G092050 Sobic002G155000 Sobic002G155000 Sobic001G466500--Sobic002G155000 Sobic001G466500--Sobic006G193300 Sobic003G218200 Sobic003G218200 Sobic001G466500--Sobic003G218200 Sobic001G466500--Sobic002G386600 Sobic003G014700--Sobic002G378100 Sobic005G028300 Sobic005G028300 Sobic003G014700--Sobic005G028300 Sobic010G083900 Sobic010G083900 Sobic003G014700--Sobic010G083900 Sobic001G322600 Sobic001G322600 Sobic003G014700--Sobic001G322600 Sobic001G391101 Sobic001G391101 Sobic003G014700--Sobic001G391101 Sobic004G027500 Sobic004G027500 Sobic003G014700--Sobic004G027500 Sobic002G423400 Sobic002G423400 Sobic003G014700--Sobic002G423400 Sobic003G014700--Sobic005G012700 Sobic003G419800 Sobic003G419800 Sobic003G014700--Sobic003G419800 Sobic002G364900--Sobic003G304400 Sobic010G192600 Sobic010G192600 Sobic002G364900--Sobic010G192600 Sobic006G265600 Sobic006G265600 Sobic002G364900--Sobic006G265600 Sobic002G364900--Sobic001G015400 Sobic002G227500 Sobic002G227500 Sobic002G364900--Sobic002G227500 Sobic002G364900--Sobic006G106300 Sobic001G099900 Sobic001G099900 Sobic002G364900--Sobic001G099900 Sobic001G085800 Sobic001G085800 Sobic002G364900--Sobic001G085800 Sobic001G474400 Sobic001G474400 Sobic002G364900--Sobic001G474400 Sobic004G180033 Sobic004G180033 Sobic004G180000--Sobic004G180033 Sobic009G005100 Sobic009G005100 Sobic004G180000--Sobic009G005100 Sobic004G180066 Sobic004G180066 Sobic004G180000--Sobic004G180066 Sobic003G153000 Sobic003G153000 Sobic004G180000--Sobic003G153000 Sobic004G294800 Sobic004G294800 Sobic004G180000--Sobic004G294800 Sobic003G439501 Sobic003G439501 Sobic004G180000--Sobic003G439501 Sobic004G180000--Sobic002G396300 Sobic010G056000 Sobic010G056000 Sobic004G180000--Sobic010G056000 Sobic002G336800 Sobic002G336800 Sobic004G180000--Sobic002G336800 Sobic003G322200 Sobic003G322200 Sobic002G344500--Sobic003G322200 Sobic002G344500--Sobic001G322600 Sobic008G056900 Sobic008G056900 Sobic002G344500--Sobic008G056900 Sobic009G096100 Sobic009G096100 Sobic002G344500--Sobic009G096100 Sobic003G407600 Sobic003G407600 Sobic002G344500--Sobic003G407600 Sobic006G226300 Sobic006G226300 Sobic002G344500--Sobic006G226300 Sobic004G036700 Sobic004G036700 Sobic002G344500--Sobic004G036700 Sobic001G422500 Sobic001G422500 Sobic002G344500--Sobic001G422500 Sobic008G152300 Sobic008G152300 Sobic002G344500--Sobic008G152300 Sobic002G234700 Sobic002G234700 Sobic005G012700--Sobic002G234700 Sobic002G373950 Sobic002G373950 Sobic005G012700--Sobic002G373950 Sobic005G012700--Sobic003G014700 Sobic009G213200 Sobic009G213200 Sobic005G012700--Sobic009G213200 Sobic001G224200 Sobic001G224200 Sobic005G012700--Sobic001G224200 Sobic009G103600 Sobic009G103600 Sobic005G012700--Sobic009G103600 Sobic008G165900 Sobic008G165900 Sobic005G012700--Sobic008G165900 Sobic009G214200 Sobic009G214200 Sobic005G012700--Sobic009G214200 Sobic005G012700--Sobic006G128400
Octagon: transcription factors


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