Gene annotation
Transcriptome id Sobic.001G282300.2,Sobic.001G282300.1
Synonym Sb01g027765
Functional annotation expressed protein
UniProt A0A1B6QLL8
Pfam PF14432 PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF735
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16480 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os11g45410.1 : expressed protein
MaizeGDB (Corn) Zm00025a003574
Brachypodium KQJ98501
Barley HORVU4Hr1G029060.1 , HORVU4Hr1G029060.3 , HORVU4Hr1G029060.2
Wheat TraesCSU02G068600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G340000 FAR1 family protein, expressed -
2 Sobic.004G007900 SNF2 family N-terminal domain containing protein, expressed K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
3 Sobic.005G114500 growth regulator related protein, putative, expressed -
4 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
5 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
6 Sobic.009G108400 CAAX amino terminal protease family protein, putative, expressed K08658: RCE1, prenyl protein peptidase
7 Sobic.005G059500 expressed protein -
8 Sobic.006G085900 pentatricopeptide, putative, expressed -
9 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
10 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H
11 Sobic.001G436600 pentatricopeptide, putative, expressed -
12 Sobic.009G122500 expressed protein -
13 Sobic.001G308400 expressed protein -
14 Sobic.003G230600 transcription factor X1, putative, expressed -
15 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
16 Sobic.009G154900 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
17 Sobic.002G235900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
18 Sobic.001G335000 erlin-2 precursor, putative, expressed -
19 Sobic.001G242300 expressed protein -
20 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5


Gene co-expression network
sample Sobic001G282300 Sobic001G282300 Sobic002G340000 Sobic002G340000 Sobic001G282300--Sobic002G340000 Sobic004G007900 Sobic004G007900 Sobic001G282300--Sobic004G007900 Sobic005G114500 Sobic005G114500 Sobic001G282300--Sobic005G114500 Sobic001G012900 Sobic001G012900 Sobic001G282300--Sobic001G012900 Sobic001G118000 Sobic001G118000 Sobic001G282300--Sobic001G118000 Sobic009G108400 Sobic009G108400 Sobic001G282300--Sobic009G108400 Sobic005G059500 Sobic005G059500 Sobic001G282300--Sobic005G059500 Sobic006G085900 Sobic006G085900 Sobic001G282300--Sobic006G085900 Sobic010G068900 Sobic010G068900 Sobic001G282300--Sobic010G068900 Sobic001G308400 Sobic001G308400 Sobic002G340000--Sobic001G308400 Sobic002G340000--Sobic004G007900 Sobic007G019300 Sobic007G019300 Sobic002G340000--Sobic007G019300 Sobic002G340000--Sobic005G059500 Sobic002G340000--Sobic005G114500 Sobic001G384400 Sobic001G384400 Sobic002G340000--Sobic001G384400 Sobic002G340000--Sobic001G012900 Sobic002G340000--Sobic001G282300 Sobic008G124800 Sobic008G124800 Sobic002G340000--Sobic008G124800 Sobic004G007900--Sobic002G340000 Sobic002G235900 Sobic002G235900 Sobic004G007900--Sobic002G235900 Sobic009G099100 Sobic009G099100 Sobic004G007900--Sobic009G099100 Sobic009G154900 Sobic009G154900 Sobic004G007900--Sobic009G154900 Sobic001G448100 Sobic001G448100 Sobic004G007900--Sobic001G448100 Sobic002G079100 Sobic002G079100 Sobic004G007900--Sobic002G079100 Sobic008G080500 Sobic008G080500 Sobic004G007900--Sobic008G080500 Sobic003G299500 Sobic003G299500 Sobic004G007900--Sobic003G299500 Sobic006G245900 Sobic006G245900 Sobic004G007900--Sobic006G245900 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic001G474400 Sobic001G474400 Sobic005G114500--Sobic001G474400 Sobic010G223400 Sobic010G223400 Sobic005G114500--Sobic010G223400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G114500--Sobic005G059500 Sobic005G110499 Sobic005G110499 Sobic005G114500--Sobic005G110499 Sobic009G122500 Sobic009G122500 Sobic005G114500--Sobic009G122500 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic004G060300 Sobic004G060300 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic003G346400 Sobic003G346400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic001G118000--Sobic005G059500 Sobic001G118000--Sobic009G122500 Sobic001G118000--Sobic010G223400 Sobic003G334700 Sobic003G334700 Sobic001G118000--Sobic003G334700 Sobic007G172700 Sobic007G172700 Sobic001G118000--Sobic007G172700 Sobic001G118000--Sobic001G308400 Sobic001G118000--Sobic004G060300 Sobic009G040325 Sobic009G040325 Sobic001G118000--Sobic009G040325 Sobic001G156900 Sobic001G156900 Sobic001G118000--Sobic001G156900 Sobic009G040800 Sobic009G040800 Sobic009G108400--Sobic009G040800 Sobic001G335900 Sobic001G335900 Sobic009G108400--Sobic001G335900 Sobic009G108400--Sobic009G154900 Sobic009G108400--Sobic001G012900 Sobic001G247200 Sobic001G247200 Sobic009G108400--Sobic001G247200 Sobic006G091000 Sobic006G091000 Sobic009G108400--Sobic006G091000 Sobic003G205100 Sobic003G205100 Sobic009G108400--Sobic003G205100 Sobic009G108400--Sobic004G007900 Sobic010G172400 Sobic010G172400 Sobic009G108400--Sobic010G172400 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic005G059500--Sobic001G118000 Sobic005G059500--Sobic010G223400 Sobic005G059500--Sobic001G012900 Sobic005G059500--Sobic003G346400 Sobic005G059500--Sobic005G114500 Sobic005G059500--Sobic001G474400 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600 Sobic004G241000 Sobic004G241000 Sobic006G085900--Sobic004G241000 Sobic006G085900--Sobic010G068900 Sobic009G155400 Sobic009G155400 Sobic006G085900--Sobic009G155400 Sobic006G069100 Sobic006G069100 Sobic006G085900--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic006G085900--Sobic002G172500 Sobic008G099900 Sobic008G099900 Sobic006G085900--Sobic008G099900 Sobic002G084400 Sobic002G084400 Sobic006G085900--Sobic002G084400 Sobic001G436600 Sobic001G436600 Sobic006G085900--Sobic001G436600 Sobic005G210700 Sobic005G210700 Sobic006G085900--Sobic005G210700 Sobic010G068900--Sobic002G172500 Sobic004G256900 Sobic004G256900 Sobic010G068900--Sobic004G256900 Sobic006G262800 Sobic006G262800 Sobic010G068900--Sobic006G262800 Sobic010G190900 Sobic010G190900 Sobic010G068900--Sobic010G190900 Sobic010G068900--Sobic004G241000 Sobic010G068900--Sobic006G069100 Sobic010G068900--Sobic006G085900 Sobic003G184300 Sobic003G184300 Sobic010G068900--Sobic003G184300 Sobic001G478900 Sobic001G478900 Sobic010G068900--Sobic001G478900
Octagon: transcription factors


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