Gene annotation
Transcriptome id Sobic.002G340000.2,Sobic.002G340000.5,Sobic.002G340000.3,Sobic.002G340000.4
Synonym Sb02g036450, FRS5
Functional annotation FAR1 family protein, expressed
UniProt C6JRJ5 , A0A1W0W6X8
Pfam PF04434 PF10551 PF03101 PF03101 PF10551 PF04434
Panther DB PTHR31669 PTHR31669:SF39 PTHR31669:SF39 PTHR31669
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0006355regulation of transcription, DNA-templated GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os07g37630.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQK15751
Barley HORVU2Hr1G040290.9 , HORVU2Hr1G040290.8 , HORVU2Hr1G040290.18 , HORVU2Hr1G040290.5 , HORVU2Hr1G040290.4 , HORVU2Hr1G040290.7 , HORVU2Hr1G040290.6 , HORVU2Hr1G040290.1 , HORVU2Hr1G040290.3 , HORVU2Hr1G040290.2 , HORVU2Hr1G040290.11 , HORVU2Hr1G040290.10 , HORVU2Hr1G040290.13 , HORVU2Hr1G040290.12 , HORVU2Hr1G040290.15 , HORVU2Hr1G040290.14 , HORVU2Hr1G040290.17 , HORVU2Hr1G040290.16
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G308400 expressed protein -
2 Sobic.004G007900 SNF2 family N-terminal domain containing protein, expressed K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
3 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
4 Sobic.005G059500 expressed protein -
5 Sobic.005G114500 growth regulator related protein, putative, expressed -
6 Sobic.001G384400 glucosyltransferase, putative, expressed K03848: alpha-1,3-glucosyltransferase
7 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
8 Sobic.001G282300 expressed protein -
9 Sobic.008G124800 expressed protein -
10 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
11 Sobic.009G122500 expressed protein -
12 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
13 Sobic.010G223400 expressed protein -
14 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
15 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
16 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
17 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
18 Sobic.003G314700 expressed protein -
19 Sobic.007G145400 expressed protein -
20 Sobic.003G230600 transcription factor X1, putative, expressed -


Gene co-expression network
sample Sobic002G340000 Sobic002G340000 Sobic001G308400 Sobic001G308400 Sobic002G340000--Sobic001G308400 Sobic004G007900 Sobic004G007900 Sobic002G340000--Sobic004G007900 Sobic007G019300 Sobic007G019300 Sobic002G340000--Sobic007G019300 Sobic005G059500 Sobic005G059500 Sobic002G340000--Sobic005G059500 Sobic005G114500 Sobic005G114500 Sobic002G340000--Sobic005G114500 Sobic001G384400 Sobic001G384400 Sobic002G340000--Sobic001G384400 Sobic001G012900 Sobic001G012900 Sobic002G340000--Sobic001G012900 Sobic001G282300 Sobic001G282300 Sobic002G340000--Sobic001G282300 Sobic008G124800 Sobic008G124800 Sobic002G340000--Sobic008G124800 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic002G227500 Sobic002G227500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic010G169900 Sobic010G169900 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic004G007900--Sobic002G340000 Sobic002G235900 Sobic002G235900 Sobic004G007900--Sobic002G235900 Sobic009G099100 Sobic009G099100 Sobic004G007900--Sobic009G099100 Sobic009G154900 Sobic009G154900 Sobic004G007900--Sobic009G154900 Sobic001G448100 Sobic001G448100 Sobic004G007900--Sobic001G448100 Sobic002G079100 Sobic002G079100 Sobic004G007900--Sobic002G079100 Sobic008G080500 Sobic008G080500 Sobic004G007900--Sobic008G080500 Sobic003G299500 Sobic003G299500 Sobic004G007900--Sobic003G299500 Sobic006G245900 Sobic006G245900 Sobic004G007900--Sobic006G245900 Sobic003G312100 Sobic003G312100 Sobic007G019300--Sobic003G312100 Sobic007G019300--Sobic008G124800 Sobic003G233400 Sobic003G233400 Sobic007G019300--Sobic003G233400 Sobic001G426600 Sobic001G426600 Sobic007G019300--Sobic001G426600 Sobic003G314700 Sobic003G314700 Sobic007G019300--Sobic003G314700 Sobic001G170100 Sobic001G170100 Sobic007G019300--Sobic001G170100 Sobic010G147833 Sobic010G147833 Sobic007G019300--Sobic010G147833 Sobic004G260100 Sobic004G260100 Sobic007G019300--Sobic004G260100 Sobic009G084900 Sobic009G084900 Sobic007G019300--Sobic009G084900 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic001G118000 Sobic001G118000 Sobic005G059500--Sobic001G118000 Sobic010G223400 Sobic010G223400 Sobic005G059500--Sobic010G223400 Sobic005G059500--Sobic001G012900 Sobic003G346400 Sobic003G346400 Sobic005G059500--Sobic003G346400 Sobic005G059500--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic005G059500--Sobic001G474400 Sobic009G122500 Sobic009G122500 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic005G114500--Sobic001G474400 Sobic005G114500--Sobic010G223400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G114500--Sobic005G059500 Sobic005G110499 Sobic005G110499 Sobic005G114500--Sobic005G110499 Sobic005G114500--Sobic009G122500 Sobic006G077200 Sobic006G077200 Sobic001G384400--Sobic006G077200 Sobic001G449900 Sobic001G449900 Sobic001G384400--Sobic001G449900 Sobic003G189600 Sobic003G189600 Sobic001G384400--Sobic003G189600 Sobic007G120500 Sobic007G120500 Sobic001G384400--Sobic007G120500 Sobic003G182300 Sobic003G182300 Sobic001G384400--Sobic003G182300 Sobic003G249600 Sobic003G249600 Sobic001G384400--Sobic003G249600 Sobic010G000800 Sobic010G000800 Sobic001G384400--Sobic010G000800 Sobic001G384400--Sobic001G156900 Sobic001G384400--Sobic007G019300 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic004G060300 Sobic004G060300 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic001G282300--Sobic002G340000 Sobic001G282300--Sobic004G007900 Sobic001G282300--Sobic005G114500 Sobic001G282300--Sobic001G012900 Sobic001G282300--Sobic001G118000 Sobic009G108400 Sobic009G108400 Sobic001G282300--Sobic009G108400 Sobic001G282300--Sobic005G059500 Sobic006G085900 Sobic006G085900 Sobic001G282300--Sobic006G085900 Sobic010G068900 Sobic010G068900 Sobic001G282300--Sobic010G068900 Sobic002G340900 Sobic002G340900 Sobic008G124800--Sobic002G340900 Sobic008G124800--Sobic006G021700 Sobic008G124800--Sobic007G019300 Sobic004G322400 Sobic004G322400 Sobic008G124800--Sobic004G322400 Sobic001G404600 Sobic001G404600 Sobic008G124800--Sobic001G404600 Sobic008G124800--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic008G124800--Sobic002G308500 Sobic003G405500 Sobic003G405500 Sobic008G124800--Sobic003G405500 Sobic002G401500 Sobic002G401500 Sobic008G124800--Sobic002G401500
Octagon: transcription factors


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