Gene annotation
Transcriptome id Sobic.003G405000.1
Synonym Sb03g044050
Functional annotation regulatory protein, putative, expressed
UniProt C5XGA8
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF844
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19970 : -
RAP-DB (Rice) LOC_Os01g69190.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT73480 , KQK12126 , KQK11249 , KQK11248 , PNT73479 , KQK11250
Barley HORVU3Hr1G094380.1 , HORVU3Hr1G094370.1
Wheat TraesCS3B02G465300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117400 DUF538 domain containing protein, putative, expressed -
2 Sobic.009G204900 receptor-like protein kinase, putative, expressed -
3 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
4 Sobic.006G012200 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
5 Sobic.002G415000 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
7 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
10 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.005G202200 integral membrane protein, putative, expressed -
12 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
13 Sobic.004G121900 expansin precursor, putative, expressed -
14 Sobic.006G086700 protein kinase family protein, putative, expressed -
15 Sobic.006G102300 transporter family protein, putative, expressed -
16 Sobic.005G072900 stress responsive protein, putative, expressed -
17 Sobic.002G196000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.003G157600 expressed protein -
19 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -


Gene co-expression network
sample Sobic003G405000 Sobic003G405000 Sobic010G117400 Sobic010G117400 Sobic003G405000--Sobic010G117400 Sobic009G204900 Sobic009G204900 Sobic003G405000--Sobic009G204900 Sobic003G384700 Sobic003G384700 Sobic003G405000--Sobic003G384700 Sobic006G012200 Sobic006G012200 Sobic003G405000--Sobic006G012200 Sobic002G415000 Sobic002G415000 Sobic003G405000--Sobic002G415000 Sobic005G182500 Sobic005G182500 Sobic003G405000--Sobic005G182500 Sobic001G183700 Sobic001G183700 Sobic003G405000--Sobic001G183700 Sobic001G360400 Sobic001G360400 Sobic003G405000--Sobic001G360400 Sobic003G273700 Sobic003G273700 Sobic003G405000--Sobic003G273700 Sobic010G117400--Sobic001G360400 Sobic010G117400--Sobic001G183700 Sobic006G277550 Sobic006G277550 Sobic010G117400--Sobic006G277550 Sobic004G316500 Sobic004G316500 Sobic010G117400--Sobic004G316500 Sobic009G072900 Sobic009G072900 Sobic010G117400--Sobic009G072900 Sobic009G009200 Sobic009G009200 Sobic010G117400--Sobic009G009200 Sobic010G117400--Sobic003G405000 Sobic010G117400--Sobic003G273700 Sobic003G152200 Sobic003G152200 Sobic010G117400--Sobic003G152200 Sobic004G121800 Sobic004G121800 Sobic009G204900--Sobic004G121800 Sobic008G099300 Sobic008G099300 Sobic009G204900--Sobic008G099300 Sobic001G272800 Sobic001G272800 Sobic009G204900--Sobic001G272800 Sobic004G121600 Sobic004G121600 Sobic009G204900--Sobic004G121600 Sobic001G342000 Sobic001G342000 Sobic009G204900--Sobic001G342000 Sobic002G196000 Sobic002G196000 Sobic009G204900--Sobic002G196000 Sobic010G214300 Sobic010G214300 Sobic009G204900--Sobic010G214300 Sobic001G522200 Sobic001G522200 Sobic009G204900--Sobic001G522200 Sobic002G111900 Sobic002G111900 Sobic009G204900--Sobic002G111900 Sobic006G122800 Sobic006G122800 Sobic003G384700--Sobic006G122800 Sobic003G157600 Sobic003G157600 Sobic003G384700--Sobic003G157600 Sobic005G063400 Sobic005G063400 Sobic003G384700--Sobic005G063400 Sobic001G147900 Sobic001G147900 Sobic003G384700--Sobic001G147900 Sobic002G042200 Sobic002G042200 Sobic003G384700--Sobic002G042200 Sobic010G161800 Sobic010G161800 Sobic003G384700--Sobic010G161800 Sobic005G080400 Sobic005G080400 Sobic003G384700--Sobic005G080400 Sobic003G351600 Sobic003G351600 Sobic003G384700--Sobic003G351600 Sobic005G203200 Sobic005G203200 Sobic003G384700--Sobic005G203200 Sobic006G117100 Sobic006G117100 Sobic006G012200--Sobic006G117100 Sobic001G278500 Sobic001G278500 Sobic006G012200--Sobic001G278500 Sobic004G121900 Sobic004G121900 Sobic006G012200--Sobic004G121900 Sobic006G012200--Sobic003G405000 Sobic007G058200 Sobic007G058200 Sobic006G012200--Sobic007G058200 Sobic006G190300 Sobic006G190300 Sobic006G012200--Sobic006G190300 Sobic005G069000 Sobic005G069000 Sobic006G012200--Sobic005G069000 Sobic005G196300 Sobic005G196300 Sobic006G012200--Sobic005G196300 Sobic004G178000 Sobic004G178000 Sobic006G012200--Sobic004G178000 Sobic003G157700 Sobic003G157700 Sobic002G415000--Sobic003G157700 Sobic002G415000--Sobic003G384700 Sobic009G074500 Sobic009G074500 Sobic002G415000--Sobic009G074500 Sobic010G113100 Sobic010G113100 Sobic002G415000--Sobic010G113100 Sobic002G101400 Sobic002G101400 Sobic002G415000--Sobic002G101400 Sobic003G128800 Sobic003G128800 Sobic002G415000--Sobic003G128800 Sobic005G061200 Sobic005G061200 Sobic002G415000--Sobic005G061200 Sobic002G415000--Sobic002G042200 Sobic004G009500 Sobic004G009500 Sobic002G415000--Sobic004G009500 Sobic008G191600 Sobic008G191600 Sobic005G182500--Sobic008G191600 Sobic005G038900 Sobic005G038900 Sobic005G182500--Sobic005G038900 Sobic002G312900 Sobic002G312900 Sobic005G182500--Sobic002G312900 Sobic004G144500 Sobic004G144500 Sobic005G182500--Sobic004G144500 Sobic009G230100 Sobic009G230100 Sobic005G182500--Sobic009G230100 Sobic003G362100 Sobic003G362100 Sobic005G182500--Sobic003G362100 Sobic008G032100 Sobic008G032100 Sobic005G182500--Sobic008G032100 Sobic004G111800 Sobic004G111800 Sobic005G182500--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic005G182500--Sobic005G213200 Sobic010G070300 Sobic010G070300 Sobic001G183700--Sobic010G070300 Sobic001G183700--Sobic001G360400 Sobic001G183700--Sobic004G009500 Sobic003G015300 Sobic003G015300 Sobic001G183700--Sobic003G015300 Sobic001G183700--Sobic010G113100 Sobic001G375200 Sobic001G375200 Sobic001G183700--Sobic001G375200 Sobic001G183700--Sobic003G152200 Sobic006G251400 Sobic006G251400 Sobic001G183700--Sobic006G251400 Sobic002G385500 Sobic002G385500 Sobic001G183700--Sobic002G385500 Sobic010G206800 Sobic010G206800 Sobic001G360400--Sobic010G206800 Sobic007G047500 Sobic007G047500 Sobic001G360400--Sobic007G047500 Sobic007G021900 Sobic007G021900 Sobic001G360400--Sobic007G021900 Sobic005G037200 Sobic005G037200 Sobic001G360400--Sobic005G037200 Sobic008G148200 Sobic008G148200 Sobic001G360400--Sobic008G148200 Sobic007G030501 Sobic007G030501 Sobic001G360400--Sobic007G030501 Sobic001G360400--Sobic001G147900 Sobic002G261300 Sobic002G261300 Sobic001G360400--Sobic002G261300 Sobic001G360400--Sobic001G183700 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic007G221100 Sobic007G221100 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450
Octagon: transcription factors


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