Gene annotation
Transcriptome id Sobic.010G117400.1
Synonym Sb10g010380
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5Z8L6
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os07g02850.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009479 , Zm00025a044909 , Zm00025a009480 , Zm00025a044910
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.006G277550 - K00430: peroxidase
4 Sobic.004G316500 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
5 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
6 Sobic.009G009200 terpene synthase, putative, expressed -
7 Sobic.003G405000 regulatory protein, putative, expressed -
8 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
9 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.010G206800 expressed protein -
11 Sobic.005G202200 integral membrane protein, putative, expressed -
12 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
13 Sobic.009G219300 expressed protein -
14 Sobic.004G212600 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
16 Sobic.003G404600 regulatory protein, putative, expressed -
17 Sobic.010G070300 DNA binding protein, putative, expressed -
18 Sobic.003G015300 expressed protein -
19 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G147900 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic010G117400 Sobic010G117400 Sobic001G360400 Sobic001G360400 Sobic010G117400--Sobic001G360400 Sobic001G183700 Sobic001G183700 Sobic010G117400--Sobic001G183700 Sobic006G277550 Sobic006G277550 Sobic010G117400--Sobic006G277550 Sobic004G316500 Sobic004G316500 Sobic010G117400--Sobic004G316500 Sobic009G072900 Sobic009G072900 Sobic010G117400--Sobic009G072900 Sobic009G009200 Sobic009G009200 Sobic010G117400--Sobic009G009200 Sobic003G405000 Sobic003G405000 Sobic010G117400--Sobic003G405000 Sobic003G273700 Sobic003G273700 Sobic010G117400--Sobic003G273700 Sobic003G152200 Sobic003G152200 Sobic010G117400--Sobic003G152200 Sobic010G206800 Sobic010G206800 Sobic001G360400--Sobic010G206800 Sobic007G047500 Sobic007G047500 Sobic001G360400--Sobic007G047500 Sobic007G021900 Sobic007G021900 Sobic001G360400--Sobic007G021900 Sobic005G037200 Sobic005G037200 Sobic001G360400--Sobic005G037200 Sobic008G148200 Sobic008G148200 Sobic001G360400--Sobic008G148200 Sobic007G030501 Sobic007G030501 Sobic001G360400--Sobic007G030501 Sobic001G147900 Sobic001G147900 Sobic001G360400--Sobic001G147900 Sobic002G261300 Sobic002G261300 Sobic001G360400--Sobic002G261300 Sobic001G360400--Sobic001G183700 Sobic010G070300 Sobic010G070300 Sobic001G183700--Sobic010G070300 Sobic001G183700--Sobic001G360400 Sobic004G009500 Sobic004G009500 Sobic001G183700--Sobic004G009500 Sobic003G015300 Sobic003G015300 Sobic001G183700--Sobic003G015300 Sobic010G113100 Sobic010G113100 Sobic001G183700--Sobic010G113100 Sobic001G375200 Sobic001G375200 Sobic001G183700--Sobic001G375200 Sobic001G183700--Sobic003G152200 Sobic006G251400 Sobic006G251400 Sobic001G183700--Sobic006G251400 Sobic002G385500 Sobic002G385500 Sobic001G183700--Sobic002G385500 Sobic006G277550--Sobic009G072900 Sobic007G058300 Sobic007G058300 Sobic006G277550--Sobic007G058300 Sobic008G044500 Sobic008G044500 Sobic006G277550--Sobic008G044500 Sobic005G213200 Sobic005G213200 Sobic006G277550--Sobic005G213200 Sobic006G038800 Sobic006G038800 Sobic006G277550--Sobic006G038800 Sobic001G331301 Sobic001G331301 Sobic006G277550--Sobic001G331301 Sobic001G243600 Sobic001G243600 Sobic006G277550--Sobic001G243600 Sobic001G403000 Sobic001G403000 Sobic006G277550--Sobic001G403000 Sobic002G375400 Sobic002G375400 Sobic006G277550--Sobic002G375400 Sobic004G316500--Sobic004G009500 Sobic001G067100 Sobic001G067100 Sobic004G316500--Sobic001G067100 Sobic004G316500--Sobic010G113100 Sobic004G316500--Sobic007G047500 Sobic002G361800 Sobic002G361800 Sobic004G316500--Sobic002G361800 Sobic002G042200 Sobic002G042200 Sobic004G316500--Sobic002G042200 Sobic004G316500--Sobic001G183700 Sobic006G086700 Sobic006G086700 Sobic004G316500--Sobic006G086700 Sobic004G316500--Sobic001G360400 Sobic009G072900--Sobic001G403000 Sobic009G072900--Sobic002G375400 Sobic010G185000 Sobic010G185000 Sobic009G072900--Sobic010G185000 Sobic005G206601 Sobic005G206601 Sobic009G072900--Sobic005G206601 Sobic004G348400 Sobic004G348400 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic003G366600 Sobic003G366600 Sobic009G072900--Sobic003G366600 Sobic009G240600 Sobic009G240600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic009G009200--Sobic009G072900 Sobic009G009200--Sobic001G360400 Sobic009G009200--Sobic002G361800 Sobic009G009200--Sobic001G403000 Sobic009G009200--Sobic007G030501 Sobic009G009200--Sobic001G147900 Sobic009G009200--Sobic006G277550 Sobic009G009200--Sobic005G037200 Sobic007G176100 Sobic007G176100 Sobic009G009200--Sobic007G176100 Sobic003G405000--Sobic010G117400 Sobic009G204900 Sobic009G204900 Sobic003G405000--Sobic009G204900 Sobic003G384700 Sobic003G384700 Sobic003G405000--Sobic003G384700 Sobic006G012200 Sobic006G012200 Sobic003G405000--Sobic006G012200 Sobic002G415000 Sobic002G415000 Sobic003G405000--Sobic002G415000 Sobic005G182500 Sobic005G182500 Sobic003G405000--Sobic005G182500 Sobic003G405000--Sobic001G183700 Sobic003G405000--Sobic001G360400 Sobic003G405000--Sobic003G273700 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic007G221100 Sobic007G221100 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450 Sobic006G256900 Sobic006G256900 Sobic003G152200--Sobic006G256900 Sobic003G152200--Sobic001G147900 Sobic003G152200--Sobic002G042200 Sobic004G024100 Sobic004G024100 Sobic003G152200--Sobic004G024100 Sobic005G065900 Sobic005G065900 Sobic003G152200--Sobic005G065900 Sobic003G404600 Sobic003G404600 Sobic003G152200--Sobic003G404600 Sobic003G152200--Sobic003G015300 Sobic003G368600 Sobic003G368600 Sobic003G152200--Sobic003G368600 Sobic003G152200--Sobic006G243600
Octagon: transcription factors


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