Gene annotation
Transcriptome id Sobic.004G002600.1
Synonym STR18, Sb04g000410
Functional annotation rhodanese-like domain containing protein, putative, expressed
UniProt C5XRH9
Pfam PF00581
Panther DB PTHR12231 PTHR12231:SF108
NCBI CDD KOG1530; Rhodanese-related sulfurtransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66170 : sulfurtransferase 18
RAP-DB (Rice) LOC_Os02g01220.1 : rhodanese-like domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G530700 transporter family protein, putative, expressed K15277: SLC35B3, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
2 Sobic.003G347400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@gp176, putative, expressed -
3 Sobic.006G124600 Regulator of chromosome condensation domain containing protein, expressed -
4 Sobic.007G116500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
5 Sobic.003G266400 clathrin assembly protein, putative, expressed -
6 Sobic.001G162400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
8 Sobic.009G176600 cytokinin-O-glucosyltransferase 2, putative, expressed -
9 Sobic.010G150900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G165100 serpin domain containing protein, putative, expressed K13963: serpin B
11 Sobic.007G010350 - -
12 Sobic.010G094400 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.010G077900 oxidoreductase/ transition metal ion binding protein, putative, expressed -
14 Sobic.005G006701 - -
15 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.002G260100 - -
17 Sobic.008G077400 - -
18 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
19 Sobic.010G043300 expressed protein -
20 Sobic.006G172300 MSP domain containing protein, expressed -


Gene co-expression network
sample Sobic004G002600 Sobic004G002600 Sobic001G530700 Sobic001G530700 Sobic004G002600--Sobic001G530700 Sobic003G347400 Sobic003G347400 Sobic004G002600--Sobic003G347400 Sobic006G124600 Sobic006G124600 Sobic004G002600--Sobic006G124600 Sobic007G116500 Sobic007G116500 Sobic004G002600--Sobic007G116500 Sobic003G266400 Sobic003G266400 Sobic004G002600--Sobic003G266400 Sobic001G162400 Sobic001G162400 Sobic004G002600--Sobic001G162400 Sobic003G220000 Sobic003G220000 Sobic004G002600--Sobic003G220000 Sobic009G176600 Sobic009G176600 Sobic004G002600--Sobic009G176600 Sobic010G150900 Sobic010G150900 Sobic004G002600--Sobic010G150900 Sobic001G530700--Sobic007G116500 Sobic001G530700--Sobic001G162400 Sobic001G530700--Sobic004G002600 Sobic002G193500 Sobic002G193500 Sobic001G530700--Sobic002G193500 Sobic004G213400 Sobic004G213400 Sobic001G530700--Sobic004G213400 Sobic007G010350 Sobic007G010350 Sobic001G530700--Sobic007G010350 Sobic001G092650 Sobic001G092650 Sobic001G530700--Sobic001G092650 Sobic002G273500 Sobic002G273500 Sobic001G530700--Sobic002G273500 Sobic001G355300 Sobic001G355300 Sobic001G530700--Sobic001G355300 Sobic002G007500 Sobic002G007500 Sobic003G347400--Sobic002G007500 Sobic002G121100 Sobic002G121100 Sobic003G347400--Sobic002G121100 Sobic003G347400--Sobic007G010350 Sobic010G043300 Sobic010G043300 Sobic003G347400--Sobic010G043300 Sobic003G164300 Sobic003G164300 Sobic003G347400--Sobic003G164300 Sobic006G067300 Sobic006G067300 Sobic003G347400--Sobic006G067300 Sobic009G180300 Sobic009G180300 Sobic003G347400--Sobic009G180300 Sobic007G219300 Sobic007G219300 Sobic003G347400--Sobic007G219300 Sobic003G180700 Sobic003G180700 Sobic003G347400--Sobic003G180700 Sobic006G124600--Sobic004G002600 Sobic006G124600--Sobic003G220000 Sobic003G231500 Sobic003G231500 Sobic006G124600--Sobic003G231500 Sobic003G198048 Sobic003G198048 Sobic006G124600--Sobic003G198048 Sobic005G165100 Sobic005G165100 Sobic006G124600--Sobic005G165100 Sobic003G128100 Sobic003G128100 Sobic006G124600--Sobic003G128100 Sobic001G261468 Sobic001G261468 Sobic006G124600--Sobic001G261468 Sobic006G034200 Sobic006G034200 Sobic006G124600--Sobic006G034200 Sobic001G238600 Sobic001G238600 Sobic006G124600--Sobic001G238600 Sobic009G187700 Sobic009G187700 Sobic007G116500--Sobic009G187700 Sobic007G116500--Sobic002G007500 Sobic007G116500--Sobic001G530700 Sobic007G116500--Sobic009G180300 Sobic004G028900 Sobic004G028900 Sobic007G116500--Sobic004G028900 Sobic001G196600 Sobic001G196600 Sobic007G116500--Sobic001G196600 Sobic001G154300 Sobic001G154300 Sobic007G116500--Sobic001G154300 Sobic004G017500 Sobic004G017500 Sobic007G116500--Sobic004G017500 Sobic007G116500--Sobic003G347400 Sobic003G364900 Sobic003G364900 Sobic003G266400--Sobic003G364900 Sobic010G018500 Sobic010G018500 Sobic003G266400--Sobic010G018500 Sobic002G111500 Sobic002G111500 Sobic003G266400--Sobic002G111500 Sobic001G543400 Sobic001G543400 Sobic003G266400--Sobic001G543400 Sobic002G090500 Sobic002G090500 Sobic003G266400--Sobic002G090500 Sobic002G153000 Sobic002G153000 Sobic003G266400--Sobic002G153000 Sobic002G232400 Sobic002G232400 Sobic003G266400--Sobic002G232400 Sobic010G042600 Sobic010G042600 Sobic003G266400--Sobic010G042600 Sobic001G146000 Sobic001G146000 Sobic003G266400--Sobic001G146000 Sobic001G502100 Sobic001G502100 Sobic001G162400--Sobic001G502100 Sobic001G162400--Sobic009G176600 Sobic010G094400 Sobic010G094400 Sobic001G162400--Sobic010G094400 Sobic002G123400 Sobic002G123400 Sobic001G162400--Sobic002G123400 Sobic003G354850 Sobic003G354850 Sobic001G162400--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic001G162400--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic001G162400--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic001G162400--Sobic003G090200 Sobic003G340000 Sobic003G340000 Sobic001G162400--Sobic003G340000 Sobic003G220000--Sobic001G238600 Sobic006G066500 Sobic006G066500 Sobic003G220000--Sobic006G066500 Sobic003G220000--Sobic003G231500 Sobic001G422300 Sobic001G422300 Sobic003G220000--Sobic001G422300 Sobic008G010400 Sobic008G010400 Sobic003G220000--Sobic008G010400 Sobic003G112200 Sobic003G112200 Sobic003G220000--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic003G220000--Sobic006G226200 Sobic003G236701 Sobic003G236701 Sobic003G220000--Sobic003G236701 Sobic007G175400 Sobic007G175400 Sobic003G220000--Sobic007G175400 Sobic009G176600--Sobic010G094400 Sobic009G176600--Sobic001G502100 Sobic009G176600--Sobic003G340000 Sobic004G247500 Sobic004G247500 Sobic009G176600--Sobic004G247500 Sobic001G015000 Sobic001G015000 Sobic009G176600--Sobic001G015000 Sobic009G176600--Sobic003G090200 Sobic009G176600--Sobic002G100300 Sobic009G176600--Sobic005G212300 Sobic009G176600--Sobic003G354850 Sobic010G150900--Sobic010G043300 Sobic010G150900--Sobic002G121100 Sobic004G149200 Sobic004G149200 Sobic010G150900--Sobic004G149200 Sobic004G089400 Sobic004G089400 Sobic010G150900--Sobic004G089400 Sobic010G150900--Sobic003G347400 Sobic010G150900--Sobic007G219300 Sobic005G006701 Sobic005G006701 Sobic010G150900--Sobic005G006701 Sobic010G150900--Sobic001G355300 Sobic010G150900--Sobic003G180700
Octagon: transcription factors


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