Gene annotation
Transcriptome id Sobic.006G124600.1,Sobic.006G124600.3,Sobic.006G124600.2
Synonym Sb06g020490
Functional annotation Regulator of chromosome condensation domain containing protein, expressed
UniProt C5YAV1
Pfam PF00415
Panther DB PTHR22870 PTHR22870:SF198
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26100 : Regulator of chromosome condensation (RCC1) family protein
RAP-DB (Rice) LOC_Os02g38350.1 : Regulator of chromosome condensation domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G002600 rhodanese-like domain containing protein, putative, expressed -
2 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
3 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
4 Sobic.003G198048 - -
5 Sobic.005G165100 serpin domain containing protein, putative, expressed K13963: serpin B
6 Sobic.003G128100 expressed protein -
7 Sobic.001G261468 - -
8 Sobic.006G034200 wax synthase, putative, expressed -
9 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.010G211100 expressed protein -
11 Sobic.001G431100 Plantacyanin(PubMedID : 23915383)@plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.005G085901 - -
13 Sobic.009G048000 villin, putative, expressed K08017: advillin
14 Sobic.002G273500 endoglucanase, putative, expressed K01179: endoglucanase
15 Sobic.001G530700 transporter family protein, putative, expressed K15277: SLC35B3, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
16 Sobic.010G024800 OsFBX462 - F-box domain containing protein, expressed -
17 Sobic.007G175400 carrier, putative, expressed -
18 Sobic.010G005900 nodulin, putative, expressed -
19 Sobic.003G180400 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
20 Sobic.003G179700 beta-galactosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic006G124600 Sobic006G124600 Sobic004G002600 Sobic004G002600 Sobic006G124600--Sobic004G002600 Sobic003G220000 Sobic003G220000 Sobic006G124600--Sobic003G220000 Sobic003G231500 Sobic003G231500 Sobic006G124600--Sobic003G231500 Sobic003G198048 Sobic003G198048 Sobic006G124600--Sobic003G198048 Sobic005G165100 Sobic005G165100 Sobic006G124600--Sobic005G165100 Sobic003G128100 Sobic003G128100 Sobic006G124600--Sobic003G128100 Sobic001G261468 Sobic001G261468 Sobic006G124600--Sobic001G261468 Sobic006G034200 Sobic006G034200 Sobic006G124600--Sobic006G034200 Sobic001G238600 Sobic001G238600 Sobic006G124600--Sobic001G238600 Sobic001G530700 Sobic001G530700 Sobic004G002600--Sobic001G530700 Sobic003G347400 Sobic003G347400 Sobic004G002600--Sobic003G347400 Sobic004G002600--Sobic006G124600 Sobic007G116500 Sobic007G116500 Sobic004G002600--Sobic007G116500 Sobic003G266400 Sobic003G266400 Sobic004G002600--Sobic003G266400 Sobic001G162400 Sobic001G162400 Sobic004G002600--Sobic001G162400 Sobic004G002600--Sobic003G220000 Sobic009G176600 Sobic009G176600 Sobic004G002600--Sobic009G176600 Sobic010G150900 Sobic010G150900 Sobic004G002600--Sobic010G150900 Sobic003G220000--Sobic001G238600 Sobic006G066500 Sobic006G066500 Sobic003G220000--Sobic006G066500 Sobic003G220000--Sobic003G231500 Sobic001G422300 Sobic001G422300 Sobic003G220000--Sobic001G422300 Sobic008G010400 Sobic008G010400 Sobic003G220000--Sobic008G010400 Sobic003G112200 Sobic003G112200 Sobic003G220000--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic003G220000--Sobic006G226200 Sobic003G236701 Sobic003G236701 Sobic003G220000--Sobic003G236701 Sobic007G175400 Sobic007G175400 Sobic003G220000--Sobic007G175400 Sobic003G231500--Sobic001G238600 Sobic003G231500--Sobic003G236701 Sobic003G231500--Sobic006G066500 Sobic003G231500--Sobic001G422300 Sobic003G231500--Sobic006G226200 Sobic003G231500--Sobic003G220000 Sobic006G209300 Sobic006G209300 Sobic003G231500--Sobic006G209300 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic003G198016 Sobic003G198016 Sobic003G198048--Sobic003G198016 Sobic010G124600 Sobic010G124600 Sobic003G198048--Sobic010G124600 Sobic003G198048--Sobic006G034200 Sobic001G538000 Sobic001G538000 Sobic003G198048--Sobic001G538000 Sobic005G110538 Sobic005G110538 Sobic003G198048--Sobic005G110538 Sobic009G156400 Sobic009G156400 Sobic003G198048--Sobic009G156400 Sobic008G087300 Sobic008G087300 Sobic003G198048--Sobic008G087300 Sobic003G179700 Sobic003G179700 Sobic003G198048--Sobic003G179700 Sobic004G167000 Sobic004G167000 Sobic003G198048--Sobic004G167000 Sobic005G165100--Sobic001G162400 Sobic005G165100--Sobic001G530700 Sobic005G165100--Sobic004G002600 Sobic001G399200 Sobic001G399200 Sobic005G165100--Sobic001G399200 Sobic005G165100--Sobic006G124600 Sobic001G140000 Sobic001G140000 Sobic005G165100--Sobic001G140000 Sobic006G172300 Sobic006G172300 Sobic005G165100--Sobic006G172300 Sobic006G109500 Sobic006G109500 Sobic005G165100--Sobic006G109500 Sobic005G165100--Sobic003G347400 Sobic006G251301 Sobic006G251301 Sobic003G128100--Sobic006G251301 Sobic003G206100 Sobic003G206100 Sobic003G128100--Sobic003G206100 Sobic009G087900 Sobic009G087900 Sobic003G128100--Sobic009G087900 Sobic008G189800 Sobic008G189800 Sobic003G128100--Sobic008G189800 Sobic003G162500 Sobic003G162500 Sobic003G128100--Sobic003G162500 Sobic002G305400 Sobic002G305400 Sobic003G128100--Sobic002G305400 Sobic003G436400 Sobic003G436400 Sobic003G128100--Sobic003G436400 Sobic004G090700 Sobic004G090700 Sobic003G128100--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic003G128100--Sobic003G206200 Sobic001G336700 Sobic001G336700 Sobic001G261468--Sobic001G336700 Sobic001G261468--Sobic006G124600 Sobic001G261468--Sobic003G220000 Sobic001G362100 Sobic001G362100 Sobic001G261468--Sobic001G362100 Sobic001G261468--Sobic003G231500 Sobic010G245500 Sobic010G245500 Sobic001G261468--Sobic010G245500 Sobic003G180400 Sobic003G180400 Sobic001G261468--Sobic003G180400 Sobic010G024800 Sobic010G024800 Sobic001G261468--Sobic010G024800 Sobic002G030725 Sobic002G030725 Sobic001G261468--Sobic002G030725 Sobic006G034200--Sobic003G162500 Sobic006G034200--Sobic006G251301 Sobic006G034200--Sobic008G189800 Sobic006G034200--Sobic003G206100 Sobic006G034200--Sobic004G090700 Sobic006G034200--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic006G034200--Sobic004G159200 Sobic003G413400 Sobic003G413400 Sobic006G034200--Sobic003G413400 Sobic002G129600 Sobic002G129600 Sobic006G034200--Sobic002G129600 Sobic001G238600--Sobic003G231500 Sobic001G238600--Sobic001G422300 Sobic002G332300 Sobic002G332300 Sobic001G238600--Sobic002G332300 Sobic001G238600--Sobic007G175400 Sobic001G238600--Sobic003G220000 Sobic001G238600--Sobic006G066500 Sobic010G232000 Sobic010G232000 Sobic001G238600--Sobic010G232000 Sobic001G238600--Sobic008G010400 Sobic005G011100 Sobic005G011100 Sobic001G238600--Sobic005G011100
Octagon: transcription factors


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