Gene annotation
Transcriptome id Sobic.005G165100.2
Synonym Sb05g022570
Functional annotation serpin domain containing protein, putative, expressed
UniProt A0A1Z5RJ13
Pfam PF00079
Panther DB PTHR11461 PTHR11461:SF169
NCBI CDD -
KEGG Orthology K13963; serpin B
Gene Ontology GO:0005615; extracellular space


Orthologs (automatic annotation)
TAIR AT1G47710 : Serine protease inhibitor (SERPIN) family protein
RAP-DB (Rice) LOC_Os11g12520.1 : serpin domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G162400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.001G530700 transporter family protein, putative, expressed K15277: SLC35B3, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
3 Sobic.004G002600 rhodanese-like domain containing protein, putative, expressed -
4 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
5 Sobic.006G124600 Regulator of chromosome condensation domain containing protein, expressed -
6 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
7 Sobic.006G172300 MSP domain containing protein, expressed -
8 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
9 Sobic.003G347400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@gp176, putative, expressed -
10 Sobic.003G180400 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.008G071050 - K12589: RRP42, exosome complex component RRP42
12 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
13 Sobic.007G116500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
14 Sobic.004G094000 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
15 Sobic.001G362100 nodulation protein-related, putative, expressed -
16 Sobic.004G184101 - -
17 Sobic.009G080600 expressed protein -
18 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
19 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
20 Sobic.006G256000 - -


Gene co-expression network
sample Sobic005G165100 Sobic005G165100 Sobic001G162400 Sobic001G162400 Sobic005G165100--Sobic001G162400 Sobic001G530700 Sobic001G530700 Sobic005G165100--Sobic001G530700 Sobic004G002600 Sobic004G002600 Sobic005G165100--Sobic004G002600 Sobic001G399200 Sobic001G399200 Sobic005G165100--Sobic001G399200 Sobic006G124600 Sobic006G124600 Sobic005G165100--Sobic006G124600 Sobic001G140000 Sobic001G140000 Sobic005G165100--Sobic001G140000 Sobic006G172300 Sobic006G172300 Sobic005G165100--Sobic006G172300 Sobic006G109500 Sobic006G109500 Sobic005G165100--Sobic006G109500 Sobic003G347400 Sobic003G347400 Sobic005G165100--Sobic003G347400 Sobic001G502100 Sobic001G502100 Sobic001G162400--Sobic001G502100 Sobic009G176600 Sobic009G176600 Sobic001G162400--Sobic009G176600 Sobic010G094400 Sobic010G094400 Sobic001G162400--Sobic010G094400 Sobic002G123400 Sobic002G123400 Sobic001G162400--Sobic002G123400 Sobic003G354850 Sobic003G354850 Sobic001G162400--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic001G162400--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic001G162400--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic001G162400--Sobic003G090200 Sobic003G340000 Sobic003G340000 Sobic001G162400--Sobic003G340000 Sobic007G116500 Sobic007G116500 Sobic001G530700--Sobic007G116500 Sobic001G530700--Sobic001G162400 Sobic001G530700--Sobic004G002600 Sobic002G193500 Sobic002G193500 Sobic001G530700--Sobic002G193500 Sobic004G213400 Sobic004G213400 Sobic001G530700--Sobic004G213400 Sobic007G010350 Sobic007G010350 Sobic001G530700--Sobic007G010350 Sobic001G092650 Sobic001G092650 Sobic001G530700--Sobic001G092650 Sobic002G273500 Sobic002G273500 Sobic001G530700--Sobic002G273500 Sobic001G355300 Sobic001G355300 Sobic001G530700--Sobic001G355300 Sobic004G002600--Sobic001G530700 Sobic004G002600--Sobic003G347400 Sobic004G002600--Sobic006G124600 Sobic004G002600--Sobic007G116500 Sobic003G266400 Sobic003G266400 Sobic004G002600--Sobic003G266400 Sobic004G002600--Sobic001G162400 Sobic003G220000 Sobic003G220000 Sobic004G002600--Sobic003G220000 Sobic004G002600--Sobic009G176600 Sobic010G150900 Sobic010G150900 Sobic004G002600--Sobic010G150900 Sobic001G406700 Sobic001G406700 Sobic001G399200--Sobic001G406700 Sobic006G144600 Sobic006G144600 Sobic001G399200--Sobic006G144600 Sobic010G232500 Sobic010G232500 Sobic001G399200--Sobic010G232500 Sobic003G387500 Sobic003G387500 Sobic001G399200--Sobic003G387500 Sobic005G229100 Sobic005G229100 Sobic001G399200--Sobic005G229100 Sobic001G362100 Sobic001G362100 Sobic001G399200--Sobic001G362100 Sobic007G223600 Sobic007G223600 Sobic001G399200--Sobic007G223600 Sobic006G226200 Sobic006G226200 Sobic001G399200--Sobic006G226200 Sobic009G170500 Sobic009G170500 Sobic001G399200--Sobic009G170500 Sobic006G124600--Sobic004G002600 Sobic006G124600--Sobic003G220000 Sobic003G231500 Sobic003G231500 Sobic006G124600--Sobic003G231500 Sobic003G198048 Sobic003G198048 Sobic006G124600--Sobic003G198048 Sobic006G124600--Sobic005G165100 Sobic003G128100 Sobic003G128100 Sobic006G124600--Sobic003G128100 Sobic001G261468 Sobic001G261468 Sobic006G124600--Sobic001G261468 Sobic006G034200 Sobic006G034200 Sobic006G124600--Sobic006G034200 Sobic001G238600 Sobic001G238600 Sobic006G124600--Sobic001G238600 Sobic002G381400 Sobic002G381400 Sobic001G140000--Sobic002G381400 Sobic010G089600 Sobic010G089600 Sobic001G140000--Sobic010G089600 Sobic004G184101 Sobic004G184101 Sobic001G140000--Sobic004G184101 Sobic004G035400 Sobic004G035400 Sobic001G140000--Sobic004G035400 Sobic001G419000 Sobic001G419000 Sobic001G140000--Sobic001G419000 Sobic008G023300 Sobic008G023300 Sobic001G140000--Sobic008G023300 Sobic007G127550 Sobic007G127550 Sobic001G140000--Sobic007G127550 Sobic002G096300 Sobic002G096300 Sobic001G140000--Sobic002G096300 Sobic010G193600 Sobic010G193600 Sobic001G140000--Sobic010G193600 Sobic006G172300--Sobic001G399200 Sobic006G172300--Sobic001G406700 Sobic006G172300--Sobic006G144600 Sobic008G164300 Sobic008G164300 Sobic006G172300--Sobic008G164300 Sobic006G172300--Sobic010G232500 Sobic006G209300 Sobic006G209300 Sobic006G172300--Sobic006G209300 Sobic002G167600 Sobic002G167600 Sobic006G172300--Sobic002G167600 Sobic006G172300--Sobic005G229100 Sobic004G163600 Sobic004G163600 Sobic006G172300--Sobic004G163600 Sobic002G312700 Sobic002G312700 Sobic006G109500--Sobic002G312700 Sobic002G271300 Sobic002G271300 Sobic006G109500--Sobic002G271300 Sobic003G161500 Sobic003G161500 Sobic006G109500--Sobic003G161500 Sobic007G172500 Sobic007G172500 Sobic006G109500--Sobic007G172500 Sobic010G090500 Sobic010G090500 Sobic006G109500--Sobic010G090500 Sobic009G079100 Sobic009G079100 Sobic006G109500--Sobic009G079100 Sobic009G073400 Sobic009G073400 Sobic006G109500--Sobic009G073400 Sobic008G043500 Sobic008G043500 Sobic006G109500--Sobic008G043500 Sobic003G132500 Sobic003G132500 Sobic006G109500--Sobic003G132500 Sobic002G007500 Sobic002G007500 Sobic003G347400--Sobic002G007500 Sobic002G121100 Sobic002G121100 Sobic003G347400--Sobic002G121100 Sobic003G347400--Sobic007G010350 Sobic010G043300 Sobic010G043300 Sobic003G347400--Sobic010G043300 Sobic003G164300 Sobic003G164300 Sobic003G347400--Sobic003G164300 Sobic006G067300 Sobic006G067300 Sobic003G347400--Sobic006G067300 Sobic009G180300 Sobic009G180300 Sobic003G347400--Sobic009G180300 Sobic007G219300 Sobic007G219300 Sobic003G347400--Sobic007G219300 Sobic003G180700 Sobic003G180700 Sobic003G347400--Sobic003G180700
Octagon: transcription factors


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