Gene annotation
Transcriptome id Sobic.008G077400.1
Synonym
Functional annotation -
UniProt A0A1B6PC21
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G094400 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.003G340000 expressed protein -
3 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
4 Sobic.010G182000 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
5 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
6 Sobic.009G176600 cytokinin-O-glucosyltransferase 2, putative, expressed -
7 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
8 Sobic.001G364900 expressed protein -
9 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
10 Sobic.001G162400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.001G502100 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
12 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
13 Sobic.005G050400 syntaxin 6, putative, expressed -
14 Sobic.004G007400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
15 Sobic.001G342101 - -
16 Sobic.008G104000 cyclin, putative, expressed K06627: cyclin-A
17 Sobic.001G485000 expressed protein -
18 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
19 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase


Gene co-expression network
sample Sobic008G077400 Sobic008G077400 Sobic010G094400 Sobic010G094400 Sobic008G077400--Sobic010G094400 Sobic003G340000 Sobic003G340000 Sobic008G077400--Sobic003G340000 Sobic001G303900 Sobic001G303900 Sobic008G077400--Sobic001G303900 Sobic010G182000 Sobic010G182000 Sobic008G077400--Sobic010G182000 Sobic004G247500 Sobic004G247500 Sobic008G077400--Sobic004G247500 Sobic009G176600 Sobic009G176600 Sobic008G077400--Sobic009G176600 Sobic004G261800 Sobic004G261800 Sobic008G077400--Sobic004G261800 Sobic001G364900 Sobic001G364900 Sobic008G077400--Sobic001G364900 Sobic007G014700 Sobic007G014700 Sobic008G077400--Sobic007G014700 Sobic010G094400--Sobic009G176600 Sobic010G094400--Sobic003G340000 Sobic001G502100 Sobic001G502100 Sobic010G094400--Sobic001G502100 Sobic003G354850 Sobic003G354850 Sobic010G094400--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic010G094400--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic010G094400--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic010G094400--Sobic003G090200 Sobic006G018000 Sobic006G018000 Sobic010G094400--Sobic006G018000 Sobic002G123400 Sobic002G123400 Sobic010G094400--Sobic002G123400 Sobic003G340000--Sobic010G094400 Sobic003G340000--Sobic004G247500 Sobic003G340000--Sobic001G502100 Sobic003G340000--Sobic009G176600 Sobic003G340000--Sobic001G303900 Sobic001G342101 Sobic001G342101 Sobic003G340000--Sobic001G342101 Sobic005G074300 Sobic005G074300 Sobic003G340000--Sobic005G074300 Sobic008G050900 Sobic008G050900 Sobic003G340000--Sobic008G050900 Sobic001G015000 Sobic001G015000 Sobic003G340000--Sobic001G015000 Sobic001G303900--Sobic004G247500 Sobic009G189700 Sobic009G189700 Sobic001G303900--Sobic009G189700 Sobic005G050400 Sobic005G050400 Sobic001G303900--Sobic005G050400 Sobic004G120500 Sobic004G120500 Sobic001G303900--Sobic004G120500 Sobic003G013700 Sobic003G013700 Sobic001G303900--Sobic003G013700 Sobic005G144000 Sobic005G144000 Sobic001G303900--Sobic005G144000 Sobic003G089100 Sobic003G089100 Sobic001G303900--Sobic003G089100 Sobic001G303900--Sobic001G342101 Sobic002G420600 Sobic002G420600 Sobic001G303900--Sobic002G420600 Sobic002G420100 Sobic002G420100 Sobic010G182000--Sobic002G420100 Sobic003G423700 Sobic003G423700 Sobic010G182000--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic010G182000--Sobic008G156600 Sobic008G104000 Sobic008G104000 Sobic010G182000--Sobic008G104000 Sobic001G072000 Sobic001G072000 Sobic010G182000--Sobic001G072000 Sobic009G163100 Sobic009G163100 Sobic010G182000--Sobic009G163100 Sobic001G400000 Sobic001G400000 Sobic010G182000--Sobic001G400000 Sobic002G172401 Sobic002G172401 Sobic010G182000--Sobic002G172401 Sobic010G182000--Sobic005G050400 Sobic004G247500--Sobic001G303900 Sobic009G157800 Sobic009G157800 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic006G070564 Sobic006G070564 Sobic004G247500--Sobic006G070564 Sobic004G247500--Sobic003G340000 Sobic004G247500--Sobic008G050900 Sobic004G247500--Sobic005G144000 Sobic004G247500--Sobic005G074300 Sobic004G247500--Sobic009G176600 Sobic009G176600--Sobic010G094400 Sobic009G176600--Sobic001G502100 Sobic009G176600--Sobic003G340000 Sobic009G176600--Sobic004G247500 Sobic009G176600--Sobic001G015000 Sobic009G176600--Sobic003G090200 Sobic009G176600--Sobic002G100300 Sobic009G176600--Sobic005G212300 Sobic009G176600--Sobic003G354850 Sobic004G261800--Sobic003G013700 Sobic002G186200 Sobic002G186200 Sobic004G261800--Sobic002G186200 Sobic004G261800--Sobic007G014700 Sobic010G253200 Sobic010G253200 Sobic004G261800--Sobic010G253200 Sobic004G261800--Sobic002G420100 Sobic002G201700 Sobic002G201700 Sobic004G261800--Sobic002G201700 Sobic004G261800--Sobic001G303900 Sobic004G261800--Sobic003G423700 Sobic004G261800--Sobic008G156600 Sobic001G364900--Sobic010G094400 Sobic004G022366 Sobic004G022366 Sobic001G364900--Sobic004G022366 Sobic002G013550 Sobic002G013550 Sobic001G364900--Sobic002G013550 Sobic001G242200 Sobic001G242200 Sobic001G364900--Sobic001G242200 Sobic003G018000 Sobic003G018000 Sobic001G364900--Sobic003G018000 Sobic001G364900--Sobic003G090200 Sobic001G364900--Sobic002G100300 Sobic001G364900--Sobic005G212300 Sobic001G364900--Sobic003G354850 Sobic007G014700--Sobic004G261800 Sobic002G255400 Sobic002G255400 Sobic007G014700--Sobic002G255400 Sobic007G014700--Sobic003G089100 Sobic007G014700--Sobic003G013700 Sobic003G260600 Sobic003G260600 Sobic007G014700--Sobic003G260600 Sobic007G014700--Sobic002G420600 Sobic003G284100 Sobic003G284100 Sobic007G014700--Sobic003G284100 Sobic002G352200 Sobic002G352200 Sobic007G014700--Sobic002G352200 Sobic007G014700--Sobic001G303900
Octagon: transcription factors


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