Gene annotation
Transcriptome id Sobic.004G021400.1
Synonym ATCEL2, CEL2, Sb04g001960
Functional annotation endoglucanase, putative, expressed
UniProt C5XT36
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G02800 : cellulase 2
RAP-DB (Rice) LOC_Os02g03120.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a057371 , Zm00025a021938 , Zm00025a035938 , Zm00025a013859 , Zm00025a036077 , Zm00025a056127 , Zm00025a049387 , Zm00025a018779 , Zm00025a046876
Brachypodium KQK07034 , KQJ90132 , KQK18693 , KQK04131
Barley HORVU3Hr1G029470.5 , HORVU6Hr1G077010.1 , HORVU6Hr1G077010.3 , HORVU6Hr1G077010.2 , HORVU6Hr1G077010.5 , HORVU6Hr1G077010.4 , HORVU6Hr1G077010.7 , HORVU6Hr1G077010.8 , HORVU6Hr1G077010.21 , HORVU6Hr1G077010.22 , HORVU5Hr1G060140.5 , HORVU5Hr1G060140.7 , HORVU5Hr1G060140.1 , HORVU5Hr1G060140.8 , HORVU5Hr1G060140.9 , HORVU7Hr1G040680.5 , HORVU7Hr1G040680.4 , HORVU7Hr1G040680.3 , HORVU7Hr1G040680.2 , HORVU6Hr1G077010.14 , HORVU6Hr1G077010.17 , HORVU6Hr1G077010.16 , HORVU6Hr1G077010.11 , HORVU6Hr1G077010.10 , HORVU6Hr1G077010.13 , HORVU6Hr1G077010.12 , HORVU6Hr1G077010.19 , HORVU6Hr1G077010.18 , HORVU5Hr1G060140.12 , HORVU5Hr1G060140.10 , HORVU5Hr1G060140.11 , HORVU6Hr1G022270.9 , HORVU6Hr1G022270.8 , HORVU6Hr1G022270.7 , HORVU6Hr1G022270.6 , HORVU6Hr1G022270.5 , HORVU6Hr1G022270.4 , HORVU6Hr1G022270.3 , HORVU6Hr1G022270.2 , HORVU6Hr1G022270.1 , HORVU7Hr1G041610.3 , HORVU1Hr1G079980.16 , HORVU1Hr1G079980.11 , HORVU1Hr1G079980.18 , HORVU7Hr1G041610.1 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU7Hr1G041610.7 , HORVU7Hr1G041610.6 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.8 , HORVU7Hr1G041610.9 , HORVU7Hr1G041610.8 , HORVU3Hr1G029470.4 , HORVU7Hr1G041610.11 , HORVU7Hr1G041610.10 , HORVU7Hr1G041610.5 , HORVU6Hr1G073570.2 , HORVU6Hr1G073570.3 , HORVU6Hr1G073570.1 , HORVU6Hr1G073570.4 , HORVU6Hr1G073570.5 , HORVU5Hr1G052830.1 , HORVU5Hr1G052830.2 , HORVU6Hr1G022300.1 , HORVU2Hr1G111880.1 , HORVU2Hr1G111880.2 , HORVU1Hr1G079980.8 , HORVU1Hr1G079980.9 , HORVU1Hr1G079980.6 , HORVU1Hr1G079980.7 , HORVU1Hr1G079980.4 , HORVU1Hr1G079980.5 , HORVU1Hr1G079980.3 , HORVU1Hr1G079980.1
Wheat TraesCS5A02G172200 , TraesCS5A02G172200 , TraesCS6B02G342600 , TraesCS5B02G201100 , TraesCS7B02G219100 , TraesCS5A02G317400 , TraesCS6A02G122100 , TraesCS1D02G074800 , TraesCS7A02G204500 , TraesCS7B02G111700 , TraesCS7B02G111700 , TraesCS6D02G275900 , TraesCS6A02G295300 , TraesCS7D02G314400 , TraesCS5B02G169500 , TraesCS5B02G169600 , TraesCS6B02G150300 , TraesCS5D02G176800 , TraesCS7B02G104600 , TraesCS5D02G208900 , TraesCS1B02G377100 , TraesCS6D02G112100 , TraesCS7A02G197900 , TraesCS5A02G202600 , TraesCS7D02G207600 , TraesCS3A02G144600 , TraesCS6B02G325400 , TraesCS7D02G201000 , TraesCS7A02G317700 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1D02G365100 , TraesCS6A02G312400 , TraesCS6A02G312400 , TraesCS5A02G172100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G087400 amino acid transporter, putative, expressed -
2 Sobic.001G542100 expansin precursor, putative, expressed -
3 Sobic.009G153500 ankyrin repeat family protein, putative, expressed -
4 Sobic.007G120200 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.002G155700 - -
6 Sobic.010G062400 expressed protein -
7 Sobic.002G222600 aspartic proteinase nepenthesin precursor, putative, expressed -
8 Sobic.008G164300 - -
9 Sobic.004G079700 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
10 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.010G152300 glycosyltransferase, putative, expressed -
13 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
14 Sobic.003G046700 expressed protein -
15 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
16 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
17 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.004G160500 expressed protein -
19 Sobic.002G197000 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
20 Sobic.002G096900 autophagy-related protein 3, putative, expressed -


Gene co-expression network
sample Sobic004G021400 Sobic004G021400 Sobic007G087400 Sobic007G087400 Sobic004G021400--Sobic007G087400 Sobic001G542100 Sobic001G542100 Sobic004G021400--Sobic001G542100 Sobic009G153500 Sobic009G153500 Sobic004G021400--Sobic009G153500 Sobic007G120200 Sobic007G120200 Sobic004G021400--Sobic007G120200 Sobic002G155700 Sobic002G155700 Sobic004G021400--Sobic002G155700 Sobic010G062400 Sobic010G062400 Sobic004G021400--Sobic010G062400 Sobic002G222600 Sobic002G222600 Sobic004G021400--Sobic002G222600 Sobic008G164300 Sobic008G164300 Sobic004G021400--Sobic008G164300 Sobic004G079700 Sobic004G079700 Sobic004G021400--Sobic004G079700 Sobic007G087400--Sobic004G021400 Sobic007G087400--Sobic009G153500 Sobic004G160500 Sobic004G160500 Sobic007G087400--Sobic004G160500 Sobic007G154100 Sobic007G154100 Sobic007G087400--Sobic007G154100 Sobic007G087400--Sobic010G062400 Sobic002G096900 Sobic002G096900 Sobic007G087400--Sobic002G096900 Sobic007G087400--Sobic002G155700 Sobic003G079100 Sobic003G079100 Sobic007G087400--Sobic003G079100 Sobic007G087400--Sobic002G222600 Sobic001G542100--Sobic004G021400 Sobic001G542100--Sobic007G120200 Sobic002G109100 Sobic002G109100 Sobic001G542100--Sobic002G109100 Sobic007G083000 Sobic007G083000 Sobic001G542100--Sobic007G083000 Sobic001G458400 Sobic001G458400 Sobic001G542100--Sobic001G458400 Sobic004G010000 Sobic004G010000 Sobic001G542100--Sobic004G010000 Sobic006G172200 Sobic006G172200 Sobic001G542100--Sobic006G172200 Sobic006G144700 Sobic006G144700 Sobic001G542100--Sobic006G144700 Sobic001G542100--Sobic009G153500 Sobic009G153500--Sobic002G155700 Sobic009G153500--Sobic004G021400 Sobic009G153500--Sobic007G087400 Sobic004G232600 Sobic004G232600 Sobic009G153500--Sobic004G232600 Sobic003G205600 Sobic003G205600 Sobic009G153500--Sobic003G205600 Sobic009G153500--Sobic004G160500 Sobic009G153500--Sobic002G096900 Sobic001G348800 Sobic001G348800 Sobic009G153500--Sobic001G348800 Sobic010G230300 Sobic010G230300 Sobic009G153500--Sobic010G230300 Sobic007G120200--Sobic001G542100 Sobic007G120200--Sobic004G021400 Sobic004G093400 Sobic004G093400 Sobic007G120200--Sobic004G093400 Sobic002G351700 Sobic002G351700 Sobic007G120200--Sobic002G351700 Sobic007G129000 Sobic007G129000 Sobic007G120200--Sobic007G129000 Sobic009G148000 Sobic009G148000 Sobic007G120200--Sobic009G148000 Sobic007G120200--Sobic002G109100 Sobic003G180100 Sobic003G180100 Sobic007G120200--Sobic003G180100 Sobic007G120200--Sobic007G087400 Sobic002G155700--Sobic002G096900 Sobic002G155700--Sobic009G153500 Sobic002G155700--Sobic007G087400 Sobic002G155700--Sobic010G230300 Sobic002G155700--Sobic004G021400 Sobic002G155700--Sobic004G160500 Sobic002G155700--Sobic007G083000 Sobic002G155700--Sobic004G232600 Sobic008G122500 Sobic008G122500 Sobic002G155700--Sobic008G122500 Sobic010G062400--Sobic002G222600 Sobic005G197400 Sobic005G197400 Sobic010G062400--Sobic005G197400 Sobic010G242800 Sobic010G242800 Sobic010G062400--Sobic010G242800 Sobic005G097900 Sobic005G097900 Sobic010G062400--Sobic005G097900 Sobic005G197500 Sobic005G197500 Sobic010G062400--Sobic005G197500 Sobic004G009200 Sobic004G009200 Sobic010G062400--Sobic004G009200 Sobic008G033100 Sobic008G033100 Sobic010G062400--Sobic008G033100 Sobic005G182900 Sobic005G182900 Sobic010G062400--Sobic005G182900 Sobic005G066366 Sobic005G066366 Sobic010G062400--Sobic005G066366 Sobic003G001300 Sobic003G001300 Sobic002G222600--Sobic003G001300 Sobic009G208700 Sobic009G208700 Sobic002G222600--Sobic009G208700 Sobic002G222600--Sobic007G154100 Sobic003G282300 Sobic003G282300 Sobic002G222600--Sobic003G282300 Sobic008G077900 Sobic008G077900 Sobic002G222600--Sobic008G077900 Sobic010G152300 Sobic010G152300 Sobic002G222600--Sobic010G152300 Sobic001G271300 Sobic001G271300 Sobic002G222600--Sobic001G271300 Sobic006G092100 Sobic006G092100 Sobic002G222600--Sobic006G092100 Sobic001G293100 Sobic001G293100 Sobic002G222600--Sobic001G293100 Sobic008G164300--Sobic004G021400 Sobic006G172300 Sobic006G172300 Sobic008G164300--Sobic006G172300 Sobic008G164300--Sobic010G062400 Sobic008G164300--Sobic004G079700 Sobic008G164300--Sobic002G222600 Sobic009G095800 Sobic009G095800 Sobic008G164300--Sobic009G095800 Sobic008G014700 Sobic008G014700 Sobic008G164300--Sobic008G014700 Sobic002G197000 Sobic002G197000 Sobic008G164300--Sobic002G197000 Sobic010G179900 Sobic010G179900 Sobic008G164300--Sobic010G179900 Sobic006G243500 Sobic006G243500 Sobic004G079700--Sobic006G243500 Sobic002G306700 Sobic002G306700 Sobic004G079700--Sobic002G306700 Sobic004G161900 Sobic004G161900 Sobic004G079700--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic004G079700--Sobic003G368000 Sobic004G261500 Sobic004G261500 Sobic004G079700--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic004G079700--Sobic001G443100 Sobic007G193200 Sobic007G193200 Sobic004G079700--Sobic007G193200 Sobic005G100800 Sobic005G100800 Sobic004G079700--Sobic005G100800 Sobic005G033000 Sobic005G033000 Sobic004G079700--Sobic005G033000
Octagon: transcription factors


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