Gene annotation
Transcriptome id Sobic.007G120200.3,Sobic.007G120200.1,Sobic.007G120200.2
Synonym ATH7, ATATH7, Sb07g019750
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt A0A1Z5R9E3 , A0A1Z5RAC5
Pfam PF12698 PF00005
Panther DB PTHR19229 PTHR19229:SF141
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT3G47790 : ABC2 homolog 7
RAP-DB (Rice) LOC_Os08g30780.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a020217 , Zm00025a030988
Brachypodium PNT68059 , KQJ98194
Barley HORVU1Hr1G075620.22 , HORVU1Hr1G075620.23 , HORVU1Hr1G075620.20 , HORVU1Hr1G075620.21 , HORVU1Hr1G075610.8 , HORVU1Hr1G075610.9 , HORVU1Hr1G075610.2 , HORVU1Hr1G075610.3 , HORVU1Hr1G075610.1 , HORVU1Hr1G075610.6 , HORVU1Hr1G075610.7 , HORVU1Hr1G075610.4 , HORVU1Hr1G075610.5 , HORVU1Hr1G075620.9 , HORVU1Hr1G075620.8 , HORVU1Hr1G075620.3 , HORVU1Hr1G075620.2 , HORVU1Hr1G075620.1 , HORVU1Hr1G075620.7 , HORVU1Hr1G075620.6 , HORVU1Hr1G075620.5 , HORVU1Hr1G075620.4 , HORVU1Hr1G075610.10 , HORVU1Hr1G075620.19 , HORVU1Hr1G075620.18 , HORVU1Hr1G075620.13 , HORVU1Hr1G075620.12 , HORVU1Hr1G075620.11 , HORVU1Hr1G075620.10 , HORVU1Hr1G075620.17 , HORVU1Hr1G075620.16 , HORVU1Hr1G075620.15 , HORVU1Hr1G075620.14
Wheat TraesCS1A02G343000 , TraesCS1A02G343000 , TraesCS1D02G345300 , TraesCS1A02G343200 , TraesCS1D02G345200 , TraesCS1B02G356300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G542100 expansin precursor, putative, expressed -
2 Sobic.004G021400 endoglucanase, putative, expressed -
3 Sobic.004G093400 beta-galactosidase precursor, putative, expressed -
4 Sobic.002G351700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
6 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
7 Sobic.002G109100 LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.003G180100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
9 Sobic.007G087400 amino acid transporter, putative, expressed -
10 Sobic.006G144700 BRCA1 C Terminus domain containing protein, expressed K10683: BRCA1-associated RING domain protein 1
11 Sobic.002G253900 growth regulator related protein, putative, expressed -
12 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.002G091100 - -
14 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
15 Sobic.001G458400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed K01188: beta-glucosidase
16 Sobic.003G103701 - K04728: ATM, serine-protein kinase ATM
17 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
18 Sobic.001G385066 - -
19 Sobic.002G155700 - -
20 Sobic.001G541400 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic007G120200 Sobic007G120200 Sobic001G542100 Sobic001G542100 Sobic007G120200--Sobic001G542100 Sobic004G021400 Sobic004G021400 Sobic007G120200--Sobic004G021400 Sobic004G093400 Sobic004G093400 Sobic007G120200--Sobic004G093400 Sobic002G351700 Sobic002G351700 Sobic007G120200--Sobic002G351700 Sobic007G129000 Sobic007G129000 Sobic007G120200--Sobic007G129000 Sobic009G148000 Sobic009G148000 Sobic007G120200--Sobic009G148000 Sobic002G109100 Sobic002G109100 Sobic007G120200--Sobic002G109100 Sobic003G180100 Sobic003G180100 Sobic007G120200--Sobic003G180100 Sobic007G087400 Sobic007G087400 Sobic007G120200--Sobic007G087400 Sobic001G542100--Sobic004G021400 Sobic001G542100--Sobic007G120200 Sobic001G542100--Sobic002G109100 Sobic007G083000 Sobic007G083000 Sobic001G542100--Sobic007G083000 Sobic001G458400 Sobic001G458400 Sobic001G542100--Sobic001G458400 Sobic004G010000 Sobic004G010000 Sobic001G542100--Sobic004G010000 Sobic006G172200 Sobic006G172200 Sobic001G542100--Sobic006G172200 Sobic006G144700 Sobic006G144700 Sobic001G542100--Sobic006G144700 Sobic009G153500 Sobic009G153500 Sobic001G542100--Sobic009G153500 Sobic004G021400--Sobic007G087400 Sobic004G021400--Sobic001G542100 Sobic004G021400--Sobic009G153500 Sobic004G021400--Sobic007G120200 Sobic002G155700 Sobic002G155700 Sobic004G021400--Sobic002G155700 Sobic010G062400 Sobic010G062400 Sobic004G021400--Sobic010G062400 Sobic002G222600 Sobic002G222600 Sobic004G021400--Sobic002G222600 Sobic008G164300 Sobic008G164300 Sobic004G021400--Sobic008G164300 Sobic004G079700 Sobic004G079700 Sobic004G021400--Sobic004G079700 Sobic002G160800 Sobic002G160800 Sobic004G093400--Sobic002G160800 Sobic006G212400 Sobic006G212400 Sobic004G093400--Sobic006G212400 Sobic005G064100 Sobic005G064100 Sobic004G093400--Sobic005G064100 Sobic009G005700 Sobic009G005700 Sobic004G093400--Sobic009G005700 Sobic004G093400--Sobic002G351700 Sobic003G409600 Sobic003G409600 Sobic004G093400--Sobic003G409600 Sobic001G123100 Sobic001G123100 Sobic004G093400--Sobic001G123100 Sobic003G298900 Sobic003G298900 Sobic004G093400--Sobic003G298900 Sobic003G338200 Sobic003G338200 Sobic004G093400--Sobic003G338200 Sobic003G226700 Sobic003G226700 Sobic002G351700--Sobic003G226700 Sobic004G321400 Sobic004G321400 Sobic002G351700--Sobic004G321400 Sobic003G289800 Sobic003G289800 Sobic002G351700--Sobic003G289800 Sobic001G051300 Sobic001G051300 Sobic002G351700--Sobic001G051300 Sobic002G351700--Sobic001G123100 Sobic003G412800 Sobic003G412800 Sobic002G351700--Sobic003G412800 Sobic003G292700 Sobic003G292700 Sobic002G351700--Sobic003G292700 Sobic003G420300 Sobic003G420300 Sobic002G351700--Sobic003G420300 Sobic002G383100 Sobic002G383100 Sobic002G351700--Sobic002G383100 Sobic007G129000--Sobic006G144700 Sobic010G265900 Sobic010G265900 Sobic007G129000--Sobic010G265900 Sobic009G208900 Sobic009G208900 Sobic007G129000--Sobic009G208900 Sobic004G036800 Sobic004G036800 Sobic007G129000--Sobic004G036800 Sobic001G080200 Sobic001G080200 Sobic007G129000--Sobic001G080200 Sobic004G286700 Sobic004G286700 Sobic007G129000--Sobic004G286700 Sobic002G158900 Sobic002G158900 Sobic007G129000--Sobic002G158900 Sobic003G256900 Sobic003G256900 Sobic007G129000--Sobic003G256900 Sobic001G468500 Sobic001G468500 Sobic007G129000--Sobic001G468500 Sobic002G343000 Sobic002G343000 Sobic009G148000--Sobic002G343000 Sobic002G253900 Sobic002G253900 Sobic009G148000--Sobic002G253900 Sobic006G200901 Sobic006G200901 Sobic009G148000--Sobic006G200901 Sobic006G186300 Sobic006G186300 Sobic009G148000--Sobic006G186300 Sobic003G217500 Sobic003G217500 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic004G014100 Sobic004G014100 Sobic009G148000--Sobic004G014100 Sobic008G041900 Sobic008G041900 Sobic009G148000--Sobic008G041900 Sobic004G250600 Sobic004G250600 Sobic009G148000--Sobic004G250600 Sobic002G109100--Sobic001G458400 Sobic001G085200 Sobic001G085200 Sobic002G109100--Sobic001G085200 Sobic006G263400 Sobic006G263400 Sobic002G109100--Sobic006G263400 Sobic006G143300 Sobic006G143300 Sobic002G109100--Sobic006G143300 Sobic001G123300 Sobic001G123300 Sobic002G109100--Sobic001G123300 Sobic003G208800 Sobic003G208800 Sobic002G109100--Sobic003G208800 Sobic002G109100--Sobic002G343000 Sobic002G109100--Sobic007G083000 Sobic003G430100 Sobic003G430100 Sobic002G109100--Sobic003G430100 Sobic003G180100--Sobic009G148000 Sobic003G180100--Sobic002G343000 Sobic001G429200 Sobic001G429200 Sobic003G180100--Sobic001G429200 Sobic003G161800 Sobic003G161800 Sobic003G180100--Sobic003G161800 Sobic001G541400 Sobic001G541400 Sobic003G180100--Sobic001G541400 Sobic005G074400 Sobic005G074400 Sobic003G180100--Sobic005G074400 Sobic003G180100--Sobic006G200901 Sobic002G390400 Sobic002G390400 Sobic003G180100--Sobic002G390400 Sobic004G242200 Sobic004G242200 Sobic003G180100--Sobic004G242200 Sobic007G087400--Sobic004G021400 Sobic007G087400--Sobic009G153500 Sobic004G160500 Sobic004G160500 Sobic007G087400--Sobic004G160500 Sobic007G154100 Sobic007G154100 Sobic007G087400--Sobic007G154100 Sobic007G087400--Sobic010G062400 Sobic002G096900 Sobic002G096900 Sobic007G087400--Sobic002G096900 Sobic007G087400--Sobic002G155700 Sobic003G079100 Sobic003G079100 Sobic007G087400--Sobic003G079100 Sobic007G087400--Sobic002G222600
Octagon: transcription factors


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