Gene annotation
Transcriptome id Sobic.004G087800.1
Synonym ATABCG40, ABCG40, PDR12, Sb04g007270, ATPDR12
Functional annotation pleiotropic drug resistance protein, putative, expressed
UniProt C5XXZ1
Pfam PF14510 PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF219
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G15520 : pleiotropic drug resistance 12
RAP-DB (Rice) LOC_Os02g11760.1 : pleiotropic drug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a055596 , Zm00025a036026 , Zm00025a034596 , Zm00025a029388 , Zm00025a029387
Brachypodium KQJ93976 , KQJ93977 , KQJ89875 , KQJ89876 , KQK11913
Barley HORVU3Hr1G053350.9 , HORVU3Hr1G053350.8 , HORVU6Hr1G036800.5 , HORVU6Hr1G036800.7 , HORVU6Hr1G036800.1 , HORVU6Hr1G036800.3 , HORVU6Hr1G036800.2 , HORVU6Hr1G036800.9 , HORVU6Hr1G036800.38 , HORVU6Hr1G036800.37 , HORVU6Hr1G036800.36 , HORVU6Hr1G036800.35 , HORVU6Hr1G036800.34 , HORVU6Hr1G036800.33 , HORVU6Hr1G036800.32 , HORVU6Hr1G036800.31 , HORVU6Hr1G036800.30 , HORVU6Hr1G036800.28 , HORVU6Hr1G036800.29 , HORVU6Hr1G036800.24 , HORVU6Hr1G036800.25 , HORVU6Hr1G036800.26 , HORVU6Hr1G036800.27 , HORVU6Hr1G036800.23 , HORVU6Hr1G036800.11 , HORVU6Hr1G036800.13 , HORVU6Hr1G036800.12 , HORVU6Hr1G036800.15 , HORVU6Hr1G036800.14 , HORVU6Hr1G036800.17 , HORVU6Hr1G036800.16 , HORVU6Hr1G036800.19 , HORVU6Hr1G036800.18 , HORVU6Hr1G036800.21 , HORVU6Hr1G036800.22 , HORVU7Hr1G037750.18 , HORVU7Hr1G037750.17 , HORVU7Hr1G037750.16 , HORVU7Hr1G037750.15 , HORVU5Hr1G106850.1 , HORVU5Hr1G106850.3 , HORVU5Hr1G106850.2 , HORVU5Hr1G106850.5 , HORVU5Hr1G106850.4 , HORVU5Hr1G106850.6 , HORVU6Hr1G036800.4 , HORVU6Hr1G036800.6 , HORVU5Hr1G056280.11 , HORVU5Hr1G056280.12 , HORVU5Hr1G056280.13 , HORVU5Hr1G056280.14 , HORVU5Hr1G056280.15 , HORVU6Hr1G036800.8 , HORVU5Hr1G056280.24 , HORVU5Hr1G056280.27 , HORVU5Hr1G056280.26 , HORVU5Hr1G056280.20 , HORVU5Hr1G056280.29 , HORVU7Hr1G037750.20 , HORVU7Hr1G037750.21 , HORVU5Hr1G056280.38 , HORVU5Hr1G056280.39 , HORVU5Hr1G056280.30 , HORVU5Hr1G056280.31 , HORVU5Hr1G056280.36 , HORVU5Hr1G056280.37 , HORVU5Hr1G056280.35 , HORVU3Hr1G053350.39 , HORVU3Hr1G053350.38 , HORVU3Hr1G053350.36 , HORVU3Hr1G053350.33 , HORVU3Hr1G053350.31 , HORVU3Hr1G053350.30 , HORVU6Hr1G036800.20 , HORVU5Hr1G056280.43 , HORVU3Hr1G053350.28 , HORVU3Hr1G053350.24 , HORVU3Hr1G053350.26 , HORVU3Hr1G053350.27 , HORVU3Hr1G053350.20 , HORVU3Hr1G053350.21 , HORVU3Hr1G053350.22 , HORVU3Hr1G053350.23 , HORVU3Hr1G053350.11 , HORVU3Hr1G053350.10 , HORVU3Hr1G053350.13 , HORVU3Hr1G053350.12 , HORVU3Hr1G053350.15 , HORVU3Hr1G053350.14 , HORVU3Hr1G053350.17 , HORVU3Hr1G053350.16 , HORVU3Hr1G053350.19 , HORVU3Hr1G053350.18 , HORVU3Hr1G053350.5 , HORVU3Hr1G053350.4 , HORVU3Hr1G053350.7 , HORVU3Hr1G053350.6 , HORVU3Hr1G053350.1 , HORVU3Hr1G053350.3 , HORVU3Hr1G053350.2 , HORVU6Hr1G036800.10 , HORVU5Hr1G056280.6 , HORVU5Hr1G056280.7 , HORVU5Hr1G056280.8
Wheat TraesCS5B02G449500 , TraesCS5A02G016200 , TraesCS5B02G183500 , TraesCS5B02G183500 , TraesCS5B02G183500 , TraesCS5B02G183500 , TraesCS4A02G331100 , TraesCS7B02G088800 , TraesCS5D02G190600 , TraesCS5D02G190600 , TraesCS5D02G190600 , TraesCS3B02G248400 , TraesCS5D02G452500 , TraesCS6A02G178500 , TraesCS6D02G166100 , TraesCS3A02G217900 , TraesCS3B02G524400 , TraesCS3D02G234400 , TraesCS3A02G479800 , TraesCS7B02G000200 , TraesCS6B02G205900 , TraesCS3D02G474700 , TraesCS3D02G474700 , TraesCS5B02G572600 , TraesCS2B02G606700 , TraesCS2B02G606700
Populus PNT16680


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G241500 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.005G011500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.010G002500 integral membrane protein, putative, expressed -
4 Sobic.008G088803 - K12183: TSG101, STP22, ESCRT-I complex subunit TSG101
5 Sobic.002G387400 calmodulin-binding protein, putative, expressed -
6 Sobic.006G223900 expressed protein -
7 Sobic.006G073700 expressed protein -
8 Sobic.008G192400 carbohydrate binding protein, putative, expressed -
9 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
10 Sobic.003G295200 serine/threonine protein kinase, putative, expressed -
11 Sobic.002G196900 expressed protein -
12 Sobic.008G088860 - -
13 Sobic.002G370100 proline-rich protein, putative, expressed -
14 Sobic.001G523300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
15 Sobic.007G200200 lectin protein kinase family protein, putative, expressed -
16 Sobic.003G025000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@carnitine racemase like protein, putative, expressed -
17 Sobic.010G060701 - K07964: heparanase
18 Sobic.001G400101 - -
19 Sobic.004G358700 armadillo/beta-catenin repeat family protein, putative, expressed -
20 Sobic.003G263400 Protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic004G087800 Sobic004G087800 Sobic010G241500 Sobic010G241500 Sobic004G087800--Sobic010G241500 Sobic005G011500 Sobic005G011500 Sobic004G087800--Sobic005G011500 Sobic010G002500 Sobic010G002500 Sobic004G087800--Sobic010G002500 Sobic008G088803 Sobic008G088803 Sobic004G087800--Sobic008G088803 Sobic002G387400 Sobic002G387400 Sobic004G087800--Sobic002G387400 Sobic006G223900 Sobic006G223900 Sobic004G087800--Sobic006G223900 Sobic006G073700 Sobic006G073700 Sobic004G087800--Sobic006G073700 Sobic008G192400 Sobic008G192400 Sobic004G087800--Sobic008G192400 Sobic004G044500 Sobic004G044500 Sobic004G087800--Sobic004G044500 Sobic010G099400 Sobic010G099400 Sobic010G241500--Sobic010G099400 Sobic002G209300 Sobic002G209300 Sobic010G241500--Sobic002G209300 Sobic007G224800 Sobic007G224800 Sobic010G241500--Sobic007G224800 Sobic010G036200 Sobic010G036200 Sobic010G241500--Sobic010G036200 Sobic001G406901 Sobic001G406901 Sobic010G241500--Sobic001G406901 Sobic004G358700 Sobic004G358700 Sobic010G241500--Sobic004G358700 Sobic010G158100 Sobic010G158100 Sobic010G241500--Sobic010G158100 Sobic002G326050 Sobic002G326050 Sobic010G241500--Sobic002G326050 Sobic001G158000 Sobic001G158000 Sobic010G241500--Sobic001G158000 Sobic006G269300 Sobic006G269300 Sobic005G011500--Sobic006G269300 Sobic001G068901 Sobic001G068901 Sobic005G011500--Sobic001G068901 Sobic006G065200 Sobic006G065200 Sobic005G011500--Sobic006G065200 Sobic001G456650 Sobic001G456650 Sobic005G011500--Sobic001G456650 Sobic005G011500--Sobic002G387400 Sobic007G165200 Sobic007G165200 Sobic005G011500--Sobic007G165200 Sobic010G021401 Sobic010G021401 Sobic005G011500--Sobic010G021401 Sobic006G093400 Sobic006G093400 Sobic005G011500--Sobic006G093400 Sobic009G072400 Sobic009G072400 Sobic005G011500--Sobic009G072400 Sobic001G368000 Sobic001G368000 Sobic010G002500--Sobic001G368000 Sobic007G017300 Sobic007G017300 Sobic010G002500--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic010G002500--Sobic009G004500 Sobic010G002500--Sobic010G021401 Sobic001G483200 Sobic001G483200 Sobic010G002500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic010G002500--Sobic005G155001 Sobic009G114900 Sobic009G114900 Sobic010G002500--Sobic009G114900 Sobic007G061500 Sobic007G061500 Sobic010G002500--Sobic007G061500 Sobic002G314950 Sobic002G314950 Sobic010G002500--Sobic002G314950 Sobic001G523300 Sobic001G523300 Sobic008G088803--Sobic001G523300 Sobic003G406240 Sobic003G406240 Sobic008G088803--Sobic003G406240 Sobic002G396900 Sobic002G396900 Sobic008G088803--Sobic002G396900 Sobic008G096150 Sobic008G096150 Sobic008G088803--Sobic008G096150 Sobic003G295200 Sobic003G295200 Sobic008G088803--Sobic003G295200 Sobic010G200800 Sobic010G200800 Sobic008G088803--Sobic010G200800 Sobic009G031300 Sobic009G031300 Sobic008G088803--Sobic009G031300 Sobic001G309000 Sobic001G309000 Sobic008G088803--Sobic001G309000 Sobic001G400101 Sobic001G400101 Sobic008G088803--Sobic001G400101 Sobic002G387400--Sobic001G368000 Sobic001G490600 Sobic001G490600 Sobic002G387400--Sobic001G490600 Sobic009G170301 Sobic009G170301 Sobic002G387400--Sobic009G170301 Sobic008G095000 Sobic008G095000 Sobic002G387400--Sobic008G095000 Sobic005G094500 Sobic005G094500 Sobic002G387400--Sobic005G094500 Sobic002G387400--Sobic010G021401 Sobic002G387400--Sobic007G017300 Sobic002G076932 Sobic002G076932 Sobic002G387400--Sobic002G076932 Sobic009G184500 Sobic009G184500 Sobic002G387400--Sobic009G184500 Sobic003G025000 Sobic003G025000 Sobic006G223900--Sobic003G025000 Sobic004G262900 Sobic004G262900 Sobic006G223900--Sobic004G262900 Sobic003G109300 Sobic003G109300 Sobic006G223900--Sobic003G109300 Sobic001G149500 Sobic001G149500 Sobic006G223900--Sobic001G149500 Sobic003G125000 Sobic003G125000 Sobic006G223900--Sobic003G125000 Sobic006G223900--Sobic004G087800 Sobic007G172300 Sobic007G172300 Sobic006G223900--Sobic007G172300 Sobic009G015000 Sobic009G015000 Sobic006G223900--Sobic009G015000 Sobic009G187900 Sobic009G187900 Sobic006G223900--Sobic009G187900 Sobic009G020800 Sobic009G020800 Sobic006G073700--Sobic009G020800 Sobic010G150600 Sobic010G150600 Sobic006G073700--Sobic010G150600 Sobic006G073700--Sobic001G400101 Sobic006G073700--Sobic001G523300 Sobic006G073700--Sobic004G044500 Sobic010G060701 Sobic010G060701 Sobic006G073700--Sobic010G060701 Sobic001G361750 Sobic001G361750 Sobic006G073700--Sobic001G361750 Sobic006G073700--Sobic008G096150 Sobic007G200200 Sobic007G200200 Sobic006G073700--Sobic007G200200 Sobic001G487250 Sobic001G487250 Sobic008G192400--Sobic001G487250 Sobic003G390600 Sobic003G390600 Sobic008G192400--Sobic003G390600 Sobic008G192400--Sobic010G002500 Sobic008G024700 Sobic008G024700 Sobic008G192400--Sobic008G024700 Sobic007G206600 Sobic007G206600 Sobic008G192400--Sobic007G206600 Sobic008G192400--Sobic009G020800 Sobic010G084900 Sobic010G084900 Sobic008G192400--Sobic010G084900 Sobic006G109850 Sobic006G109850 Sobic008G192400--Sobic006G109850 Sobic004G081000 Sobic004G081000 Sobic008G192400--Sobic004G081000 Sobic004G044500--Sobic003G390600 Sobic003G281400 Sobic003G281400 Sobic004G044500--Sobic003G281400 Sobic004G044500--Sobic004G081000 Sobic007G200300 Sobic007G200300 Sobic004G044500--Sobic007G200300 Sobic002G280001 Sobic002G280001 Sobic004G044500--Sobic002G280001 Sobic005G014400 Sobic005G014400 Sobic004G044500--Sobic005G014400 Sobic006G024400 Sobic006G024400 Sobic004G044500--Sobic006G024400 Sobic006G154900 Sobic006G154900 Sobic004G044500--Sobic006G154900 Sobic005G031100 Sobic005G031100 Sobic004G044500--Sobic005G031100
Octagon: transcription factors


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