Gene annotation
Transcriptome id Sobic.004G128500.2,Sobic.004G128500.3
Synonym Sb04g011096
Functional annotation -
UniProt A0A1Z5RMW8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g18390.1 : expressed protein
MaizeGDB (Corn) Zm00025a034373
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.005G061200 dirigent, putative, expressed -
3 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.007G030501 - -
6 Sobic.001G147900 cytochrome P450, putative, expressed -
7 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
8 Sobic.001G159900 uncharacterized protein At4g06744 precursor, putative, expressed -
9 Sobic.001G434300 expressed protein -
10 Sobic.008G102800 expressed protein -
11 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
12 Sobic.009G009200 terpene synthase, putative, expressed -
13 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
14 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
15 Sobic.009G154700 Ferredoxin-6(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
16 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
17 Sobic.004G234100 phosphoglycerate mutase, putative, expressed -
18 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
19 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
20 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase


Gene co-expression network
sample Sobic004G128500 Sobic004G128500 Sobic007G176000 Sobic007G176000 Sobic004G128500--Sobic007G176000 Sobic005G061200 Sobic005G061200 Sobic004G128500--Sobic005G061200 Sobic007G176100 Sobic007G176100 Sobic004G128500--Sobic007G176100 Sobic001G360400 Sobic001G360400 Sobic004G128500--Sobic001G360400 Sobic007G030501 Sobic007G030501 Sobic004G128500--Sobic007G030501 Sobic001G147900 Sobic001G147900 Sobic004G128500--Sobic001G147900 Sobic007G218800 Sobic007G218800 Sobic004G128500--Sobic007G218800 Sobic001G159900 Sobic001G159900 Sobic004G128500--Sobic001G159900 Sobic001G434300 Sobic001G434300 Sobic004G128500--Sobic001G434300 Sobic007G176000--Sobic007G176100 Sobic007G178900 Sobic007G178900 Sobic007G176000--Sobic007G178900 Sobic007G176000--Sobic007G030501 Sobic002G216100 Sobic002G216100 Sobic007G176000--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic007G176000--Sobic006G197100 Sobic007G176000--Sobic005G061200 Sobic002G185800 Sobic002G185800 Sobic007G176000--Sobic002G185800 Sobic004G139300 Sobic004G139300 Sobic007G176000--Sobic004G139300 Sobic008G055100 Sobic008G055100 Sobic007G176000--Sobic008G055100 Sobic009G088900 Sobic009G088900 Sobic005G061200--Sobic009G088900 Sobic005G061200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic005G061200--Sobic002G154600 Sobic001G261460 Sobic001G261460 Sobic005G061200--Sobic001G261460 Sobic001G514200 Sobic001G514200 Sobic005G061200--Sobic001G514200 Sobic005G061200--Sobic007G218800 Sobic005G061200--Sobic008G055100 Sobic005G061200--Sobic007G178900 Sobic002G261500 Sobic002G261500 Sobic005G061200--Sobic002G261500 Sobic007G176100--Sobic007G176000 Sobic007G176100--Sobic007G030501 Sobic007G176100--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic007G176100--Sobic005G046700 Sobic008G048400 Sobic008G048400 Sobic007G176100--Sobic008G048400 Sobic007G176100--Sobic007G178900 Sobic007G176100--Sobic002G216100 Sobic007G176100--Sobic004G139300 Sobic007G176100--Sobic006G197100 Sobic010G206800 Sobic010G206800 Sobic001G360400--Sobic010G206800 Sobic007G047500 Sobic007G047500 Sobic001G360400--Sobic007G047500 Sobic007G021900 Sobic007G021900 Sobic001G360400--Sobic007G021900 Sobic005G037200 Sobic005G037200 Sobic001G360400--Sobic005G037200 Sobic008G148200 Sobic008G148200 Sobic001G360400--Sobic008G148200 Sobic001G360400--Sobic007G030501 Sobic001G360400--Sobic001G147900 Sobic002G261300 Sobic002G261300 Sobic001G360400--Sobic002G261300 Sobic001G183700 Sobic001G183700 Sobic001G360400--Sobic001G183700 Sobic007G030501--Sobic007G176100 Sobic007G030501--Sobic007G176000 Sobic007G030501--Sobic006G197100 Sobic003G368600 Sobic003G368600 Sobic007G030501--Sobic003G368600 Sobic004G349125 Sobic004G349125 Sobic007G030501--Sobic004G349125 Sobic007G030501--Sobic004G139300 Sobic007G030501--Sobic002G261300 Sobic010G252500 Sobic010G252500 Sobic007G030501--Sobic010G252500 Sobic002G042200 Sobic002G042200 Sobic007G030501--Sobic002G042200 Sobic001G147900--Sobic003G368600 Sobic001G147900--Sobic006G197100 Sobic003G404600 Sobic003G404600 Sobic001G147900--Sobic003G404600 Sobic006G243600 Sobic006G243600 Sobic001G147900--Sobic006G243600 Sobic002G003800 Sobic002G003800 Sobic001G147900--Sobic002G003800 Sobic003G152200 Sobic003G152200 Sobic001G147900--Sobic003G152200 Sobic006G256900 Sobic006G256900 Sobic001G147900--Sobic006G256900 Sobic004G348400 Sobic004G348400 Sobic001G147900--Sobic004G348400 Sobic006G059700 Sobic006G059700 Sobic001G147900--Sobic006G059700 Sobic007G218800--Sobic008G055100 Sobic007G218800--Sobic002G154600 Sobic007G218800--Sobic007G176000 Sobic007G218800--Sobic010G252500 Sobic007G218800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic007G218800--Sobic003G311800 Sobic001G430100 Sobic001G430100 Sobic007G218800--Sobic001G430100 Sobic001G049900 Sobic001G049900 Sobic007G218800--Sobic001G049900 Sobic010G085800 Sobic010G085800 Sobic007G218800--Sobic010G085800 Sobic001G159900--Sobic002G261300 Sobic001G159900--Sobic010G085800 Sobic001G159900--Sobic007G030501 Sobic007G164400 Sobic007G164400 Sobic001G159900--Sobic007G164400 Sobic009G240600 Sobic009G240600 Sobic001G159900--Sobic009G240600 Sobic001G159900--Sobic007G218800 Sobic009G224500 Sobic009G224500 Sobic001G159900--Sobic009G224500 Sobic004G062500 Sobic004G062500 Sobic001G159900--Sobic004G062500 Sobic001G159900--Sobic010G206800 Sobic001G434300--Sobic002G154600 Sobic001G434300--Sobic007G218800 Sobic003G219800 Sobic003G219800 Sobic001G434300--Sobic003G219800 Sobic001G038300 Sobic001G038300 Sobic001G434300--Sobic001G038300 Sobic003G316000 Sobic003G316000 Sobic001G434300--Sobic003G316000 Sobic001G310300 Sobic001G310300 Sobic001G434300--Sobic001G310300 Sobic001G434300--Sobic005G061200 Sobic009G181800 Sobic009G181800 Sobic001G434300--Sobic009G181800 Sobic001G418100 Sobic001G418100 Sobic001G434300--Sobic001G418100
Octagon: transcription factors


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