Gene annotation
Transcriptome id Sobic.004G152300.1
Synonym Sb04g020230
Functional annotation X8 domain containing protein, expressed
UniProt C5XSI9
Pfam PF07983
Panther DB PTHR32227
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13600 : Carbohydrate-binding X8 domain superfamily protein
RAP-DB (Rice) LOC_Os02g29980.1 : X8 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020379 , Zm00025a031390
Brachypodium PNT68659 , KQJ99549 , PNT68660 , PNT68661
Barley HORVU5Hr1G109550.5 , HORVU5Hr1G109550.4 , HORVU5Hr1G109550.1 , HORVU5Hr1G109550.3 , HORVU5Hr1G109550.2
Wheat TraesCS5D02G467200 , TraesCS5A02G456400 , TraesCS5B02G465400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G261000 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
2 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.010G224400 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
4 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.010G005000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
6 Sobic.002G222200 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed K09584: PDIA6, protein disulfide-isomerase A6
7 Sobic.005G120500 expressed protein -
8 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
9 Sobic.006G095200 signal peptidase complex subunit 2, putative, expressed K12947: SPCS2, signal peptidase complex subunit 2
10 Sobic.008G084600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
11 Sobic.009G120100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
12 Sobic.006G275401 - -
13 Sobic.001G154400 expp1 protein precursor, putative, expressed -
14 Sobic.001G081100 OsSub31 - Putative Subtilisin homologue, expressed -
15 Sobic.002G116600 ZOS7-04 - C2H2 zinc finger protein, expressed -
16 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
17 Sobic.002G213500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR37 - Auxin-responsive SAUR gene family member, expressed -
18 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
19 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
20 Sobic.001G344500 sucrose synthase(PubMedID : 26616172)@sucrose synthase, putative, expressed K00695: sucrose synthase


Gene co-expression network
sample Sobic004G152300 Sobic004G152300 Sobic010G261000 Sobic010G261000 Sobic004G152300--Sobic010G261000 Sobic001G501600 Sobic001G501600 Sobic004G152300--Sobic001G501600 Sobic010G224400 Sobic010G224400 Sobic004G152300--Sobic010G224400 Sobic004G036800 Sobic004G036800 Sobic004G152300--Sobic004G036800 Sobic010G005000 Sobic010G005000 Sobic004G152300--Sobic010G005000 Sobic002G222200 Sobic002G222200 Sobic004G152300--Sobic002G222200 Sobic005G120500 Sobic005G120500 Sobic004G152300--Sobic005G120500 Sobic010G265900 Sobic010G265900 Sobic004G152300--Sobic010G265900 Sobic006G095200 Sobic006G095200 Sobic004G152300--Sobic006G095200 Sobic001G081100 Sobic001G081100 Sobic010G261000--Sobic001G081100 Sobic002G213500 Sobic002G213500 Sobic010G261000--Sobic002G213500 Sobic010G261000--Sobic004G152300 Sobic005G129700 Sobic005G129700 Sobic010G261000--Sobic005G129700 Sobic010G261000--Sobic010G224400 Sobic006G133700 Sobic006G133700 Sobic010G261000--Sobic006G133700 Sobic001G123300 Sobic001G123300 Sobic010G261000--Sobic001G123300 Sobic001G080200 Sobic001G080200 Sobic010G261000--Sobic001G080200 Sobic003G225500 Sobic003G225500 Sobic010G261000--Sobic003G225500 Sobic001G370700 Sobic001G370700 Sobic001G501600--Sobic001G370700 Sobic006G013000 Sobic006G013000 Sobic001G501600--Sobic006G013000 Sobic007G161700 Sobic007G161700 Sobic001G501600--Sobic007G161700 Sobic003G261100 Sobic003G261100 Sobic001G501600--Sobic003G261100 Sobic002G180300 Sobic002G180300 Sobic001G501600--Sobic002G180300 Sobic007G134900 Sobic007G134900 Sobic001G501600--Sobic007G134900 Sobic002G296200 Sobic002G296200 Sobic001G501600--Sobic002G296200 Sobic004G056400 Sobic004G056400 Sobic001G501600--Sobic004G056400 Sobic010G089500 Sobic010G089500 Sobic001G501600--Sobic010G089500 Sobic005G088200 Sobic005G088200 Sobic010G224400--Sobic005G088200 Sobic005G197700 Sobic005G197700 Sobic010G224400--Sobic005G197700 Sobic010G224400--Sobic002G213500 Sobic003G375300 Sobic003G375300 Sobic010G224400--Sobic003G375300 Sobic007G043300 Sobic007G043300 Sobic010G224400--Sobic007G043300 Sobic010G224400--Sobic010G261000 Sobic006G118800 Sobic006G118800 Sobic010G224400--Sobic006G118800 Sobic010G224400--Sobic001G081100 Sobic010G224400--Sobic004G152300 Sobic004G343600 Sobic004G343600 Sobic004G036800--Sobic004G343600 Sobic001G468500 Sobic001G468500 Sobic004G036800--Sobic001G468500 Sobic004G036800--Sobic006G133700 Sobic001G412500 Sobic001G412500 Sobic004G036800--Sobic001G412500 Sobic007G129000 Sobic007G129000 Sobic004G036800--Sobic007G129000 Sobic010G256200 Sobic010G256200 Sobic004G036800--Sobic010G256200 Sobic001G369800 Sobic001G369800 Sobic004G036800--Sobic001G369800 Sobic001G040300 Sobic001G040300 Sobic004G036800--Sobic001G040300 Sobic004G036800--Sobic010G265900 Sobic001G201100 Sobic001G201100 Sobic010G005000--Sobic001G201100 Sobic007G009100 Sobic007G009100 Sobic010G005000--Sobic007G009100 Sobic004G166500 Sobic004G166500 Sobic010G005000--Sobic004G166500 Sobic005G080900 Sobic005G080900 Sobic010G005000--Sobic005G080900 Sobic006G142332 Sobic006G142332 Sobic010G005000--Sobic006G142332 Sobic010G005000--Sobic010G265900 Sobic001G295800 Sobic001G295800 Sobic010G005000--Sobic001G295800 Sobic004G069200 Sobic004G069200 Sobic010G005000--Sobic004G069200 Sobic002G247600 Sobic002G247600 Sobic010G005000--Sobic002G247600 Sobic001G073600 Sobic001G073600 Sobic002G222200--Sobic001G073600 Sobic010G002800 Sobic010G002800 Sobic002G222200--Sobic010G002800 Sobic008G018200 Sobic008G018200 Sobic002G222200--Sobic008G018200 Sobic004G011700 Sobic004G011700 Sobic002G222200--Sobic004G011700 Sobic002G232400 Sobic002G232400 Sobic002G222200--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic002G222200--Sobic001G135200 Sobic009G224400 Sobic009G224400 Sobic002G222200--Sobic009G224400 Sobic001G352800 Sobic001G352800 Sobic002G222200--Sobic001G352800 Sobic007G119600 Sobic007G119600 Sobic002G222200--Sobic007G119600 Sobic005G120500--Sobic005G080900 Sobic005G120500--Sobic010G265900 Sobic009G216800 Sobic009G216800 Sobic005G120500--Sobic009G216800 Sobic008G102800 Sobic008G102800 Sobic005G120500--Sobic008G102800 Sobic007G150800 Sobic007G150800 Sobic005G120500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic005G120500--Sobic009G173500 Sobic003G122200 Sobic003G122200 Sobic005G120500--Sobic003G122200 Sobic001G347901 Sobic001G347901 Sobic005G120500--Sobic001G347901 Sobic001G157800 Sobic001G157800 Sobic005G120500--Sobic001G157800 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic010G265900--Sobic005G080900 Sobic003G084300 Sobic003G084300 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic009G120100 Sobic009G120100 Sobic006G095200--Sobic009G120100 Sobic007G012900 Sobic007G012900 Sobic006G095200--Sobic007G012900 Sobic010G266300 Sobic010G266300 Sobic006G095200--Sobic010G266300 Sobic007G117800 Sobic007G117800 Sobic006G095200--Sobic007G117800 Sobic010G008800 Sobic010G008800 Sobic006G095200--Sobic010G008800 Sobic003G148900 Sobic003G148900 Sobic006G095200--Sobic003G148900 Sobic007G152400 Sobic007G152400 Sobic006G095200--Sobic007G152400 Sobic008G162000 Sobic008G162000 Sobic006G095200--Sobic008G162000 Sobic009G070200 Sobic009G070200 Sobic006G095200--Sobic009G070200
Octagon: transcription factors


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