Gene annotation
Transcriptome id Sobic.006G275401.1
Synonym -
Functional annotation -
UniProt A0A1Z5RGA3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g58940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G275501 - K14497: protein phosphatase 2C
2 Sobic.008G079032 - -
3 Sobic.010G005000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
4 Sobic.001G101200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
5 Sobic.002G116600 ZOS7-04 - C2H2 zinc finger protein, expressed -
6 Sobic.004G152300 X8 domain containing protein, expressed -
7 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
8 Sobic.008G181100 - -
9 Sobic.009G196400 expressed protein -
10 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
11 Sobic.003G088400 Up-reguralion under drought(PubMedID : 24916767)@BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
12 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
14 Sobic.010G261000 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
15 Sobic.002G426700 expressed protein -
16 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
17 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
19 Sobic.003G249900 metallo-beta-lactamase family protein, putative, expressed K17725: sulfur dioxygenase
20 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic006G275401 Sobic006G275401 Sobic003G275501 Sobic003G275501 Sobic006G275401--Sobic003G275501 Sobic008G079032 Sobic008G079032 Sobic006G275401--Sobic008G079032 Sobic010G005000 Sobic010G005000 Sobic006G275401--Sobic010G005000 Sobic001G101200 Sobic001G101200 Sobic006G275401--Sobic001G101200 Sobic002G116600 Sobic002G116600 Sobic006G275401--Sobic002G116600 Sobic004G152300 Sobic004G152300 Sobic006G275401--Sobic004G152300 Sobic004G273400 Sobic004G273400 Sobic006G275401--Sobic004G273400 Sobic008G181100 Sobic008G181100 Sobic006G275401--Sobic008G181100 Sobic009G196400 Sobic009G196400 Sobic006G275401--Sobic009G196400 Sobic003G275501--Sobic004G273400 Sobic001G243500 Sobic001G243500 Sobic003G275501--Sobic001G243500 Sobic007G148000 Sobic007G148000 Sobic003G275501--Sobic007G148000 Sobic005G203100 Sobic005G203100 Sobic003G275501--Sobic005G203100 Sobic001G243600 Sobic001G243600 Sobic003G275501--Sobic001G243600 Sobic003G275501--Sobic006G275401 Sobic003G088500 Sobic003G088500 Sobic003G275501--Sobic003G088500 Sobic010G209900 Sobic010G209900 Sobic003G275501--Sobic010G209900 Sobic004G333150 Sobic004G333150 Sobic003G275501--Sobic004G333150 Sobic009G201100 Sobic009G201100 Sobic008G079032--Sobic009G201100 Sobic002G101500 Sobic002G101500 Sobic008G079032--Sobic002G101500 Sobic005G083220 Sobic005G083220 Sobic008G079032--Sobic005G083220 Sobic005G189000 Sobic005G189000 Sobic008G079032--Sobic005G189000 Sobic005G186250 Sobic005G186250 Sobic008G079032--Sobic005G186250 Sobic004G207500 Sobic004G207500 Sobic008G079032--Sobic004G207500 Sobic008G144201 Sobic008G144201 Sobic008G079032--Sobic008G144201 Sobic009G169050 Sobic009G169050 Sobic008G079032--Sobic009G169050 Sobic003G415200 Sobic003G415200 Sobic008G079032--Sobic003G415200 Sobic001G201100 Sobic001G201100 Sobic010G005000--Sobic001G201100 Sobic007G009100 Sobic007G009100 Sobic010G005000--Sobic007G009100 Sobic004G166500 Sobic004G166500 Sobic010G005000--Sobic004G166500 Sobic005G080900 Sobic005G080900 Sobic010G005000--Sobic005G080900 Sobic006G142332 Sobic006G142332 Sobic010G005000--Sobic006G142332 Sobic010G265900 Sobic010G265900 Sobic010G005000--Sobic010G265900 Sobic001G295800 Sobic001G295800 Sobic010G005000--Sobic001G295800 Sobic004G069200 Sobic004G069200 Sobic010G005000--Sobic004G069200 Sobic002G247600 Sobic002G247600 Sobic010G005000--Sobic002G247600 Sobic001G101200--Sobic004G333150 Sobic001G101200--Sobic001G243600 Sobic003G271500 Sobic003G271500 Sobic001G101200--Sobic003G271500 Sobic001G101200--Sobic004G273400 Sobic001G100700 Sobic001G100700 Sobic001G101200--Sobic001G100700 Sobic008G082200 Sobic008G082200 Sobic001G101200--Sobic008G082200 Sobic001G478200 Sobic001G478200 Sobic001G101200--Sobic001G478200 Sobic010G052700 Sobic010G052700 Sobic001G101200--Sobic010G052700 Sobic002G310500 Sobic002G310500 Sobic001G101200--Sobic002G310500 Sobic002G116600--Sobic008G079032 Sobic009G196600 Sobic009G196600 Sobic002G116600--Sobic009G196600 Sobic001G050900 Sobic001G050900 Sobic002G116600--Sobic001G050900 Sobic010G196800 Sobic010G196800 Sobic002G116600--Sobic010G196800 Sobic002G116600--Sobic009G201100 Sobic001G220132 Sobic001G220132 Sobic002G116600--Sobic001G220132 Sobic010G261000 Sobic010G261000 Sobic004G152300--Sobic010G261000 Sobic001G501600 Sobic001G501600 Sobic004G152300--Sobic001G501600 Sobic010G224400 Sobic010G224400 Sobic004G152300--Sobic010G224400 Sobic004G036800 Sobic004G036800 Sobic004G152300--Sobic004G036800 Sobic004G152300--Sobic010G005000 Sobic002G222200 Sobic002G222200 Sobic004G152300--Sobic002G222200 Sobic005G120500 Sobic005G120500 Sobic004G152300--Sobic005G120500 Sobic004G152300--Sobic010G265900 Sobic006G095200 Sobic006G095200 Sobic004G152300--Sobic006G095200 Sobic004G273400--Sobic001G243600 Sobic004G273400--Sobic001G243500 Sobic004G273400--Sobic001G100700 Sobic005G213200 Sobic005G213200 Sobic004G273400--Sobic005G213200 Sobic009G106800 Sobic009G106800 Sobic004G273400--Sobic009G106800 Sobic001G444400 Sobic001G444400 Sobic004G273400--Sobic001G444400 Sobic006G153100 Sobic006G153100 Sobic004G273400--Sobic006G153100 Sobic004G273400--Sobic004G333150 Sobic007G141500 Sobic007G141500 Sobic004G273400--Sobic007G141500 Sobic003G088400 Sobic003G088400 Sobic008G181100--Sobic003G088400 Sobic005G101700 Sobic005G101700 Sobic008G181100--Sobic005G101700 Sobic001G318600 Sobic001G318600 Sobic008G181100--Sobic001G318600 Sobic005G101600 Sobic005G101600 Sobic008G181100--Sobic005G101600 Sobic006G268800 Sobic006G268800 Sobic008G181100--Sobic006G268800 Sobic003G200700 Sobic003G200700 Sobic008G181100--Sobic003G200700 Sobic010G084100 Sobic010G084100 Sobic008G181100--Sobic010G084100 Sobic010G211900 Sobic010G211900 Sobic008G181100--Sobic010G211900 Sobic007G227300 Sobic007G227300 Sobic008G181100--Sobic007G227300 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic009G196400--Sobic006G153100 Sobic002G421800 Sobic002G421800 Sobic009G196400--Sobic002G421800 Sobic001G333400 Sobic001G333400 Sobic009G196400--Sobic001G333400 Sobic009G196400--Sobic009G106800 Sobic004G240600 Sobic004G240600 Sobic009G196400--Sobic004G240600 Sobic003G087300 Sobic003G087300 Sobic009G196400--Sobic003G087300 Sobic009G196400--Sobic007G141500
Octagon: transcription factors


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