Gene annotation
Transcriptome id Sobic.003G275501.1
Synonym -
Functional annotation -
UniProt A0A1W0VZ61
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF335
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14497; protein phosphatase 2C
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G72770 : homology to ABI1
RAP-DB (Rice) LOC_Os05g46040.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
2 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
4 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
5 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.006G275401 - -
7 Sobic.003G088500 multicopper oxidase domain containing protein, expressed -
8 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
9 Sobic.004G333150 - -
10 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
11 Sobic.003G249900 metallo-beta-lactamase family protein, putative, expressed K17725: sulfur dioxygenase
12 Sobic.001G101200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
13 Sobic.003G087300 nuclease PA3, putative, expressed -
14 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
15 Sobic.007G215900 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
17 Sobic.002G346100 - -
18 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.001G243400 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.004G245500 expressed protein -


Gene co-expression network
sample Sobic003G275501 Sobic003G275501 Sobic004G273400 Sobic004G273400 Sobic003G275501--Sobic004G273400 Sobic001G243500 Sobic001G243500 Sobic003G275501--Sobic001G243500 Sobic007G148000 Sobic007G148000 Sobic003G275501--Sobic007G148000 Sobic005G203100 Sobic005G203100 Sobic003G275501--Sobic005G203100 Sobic001G243600 Sobic001G243600 Sobic003G275501--Sobic001G243600 Sobic006G275401 Sobic006G275401 Sobic003G275501--Sobic006G275401 Sobic003G088500 Sobic003G088500 Sobic003G275501--Sobic003G088500 Sobic010G209900 Sobic010G209900 Sobic003G275501--Sobic010G209900 Sobic004G333150 Sobic004G333150 Sobic003G275501--Sobic004G333150 Sobic004G273400--Sobic001G243600 Sobic004G273400--Sobic001G243500 Sobic001G100700 Sobic001G100700 Sobic004G273400--Sobic001G100700 Sobic005G213200 Sobic005G213200 Sobic004G273400--Sobic005G213200 Sobic009G106800 Sobic009G106800 Sobic004G273400--Sobic009G106800 Sobic001G444400 Sobic001G444400 Sobic004G273400--Sobic001G444400 Sobic006G153100 Sobic006G153100 Sobic004G273400--Sobic006G153100 Sobic004G273400--Sobic004G333150 Sobic007G141500 Sobic007G141500 Sobic004G273400--Sobic007G141500 Sobic001G243500--Sobic004G273400 Sobic001G243500--Sobic001G243600 Sobic001G243500--Sobic001G100700 Sobic001G243500--Sobic005G213200 Sobic002G346100 Sobic002G346100 Sobic001G243500--Sobic002G346100 Sobic001G243500--Sobic009G106800 Sobic001G243400 Sobic001G243400 Sobic001G243500--Sobic001G243400 Sobic002G200300 Sobic002G200300 Sobic001G243500--Sobic002G200300 Sobic001G331301 Sobic001G331301 Sobic001G243500--Sobic001G331301 Sobic007G148000--Sobic005G203100 Sobic003G240600 Sobic003G240600 Sobic007G148000--Sobic003G240600 Sobic002G310500 Sobic002G310500 Sobic007G148000--Sobic002G310500 Sobic007G135201 Sobic007G135201 Sobic007G148000--Sobic007G135201 Sobic007G148000--Sobic003G088500 Sobic008G082200 Sobic008G082200 Sobic007G148000--Sobic008G082200 Sobic003G426100 Sobic003G426100 Sobic007G148000--Sobic003G426100 Sobic007G148000--Sobic001G243600 Sobic010G239300 Sobic010G239300 Sobic007G148000--Sobic010G239300 Sobic009G139700 Sobic009G139700 Sobic005G203100--Sobic009G139700 Sobic005G203100--Sobic007G148000 Sobic005G203100--Sobic004G333150 Sobic005G203100--Sobic003G088500 Sobic003G087300 Sobic003G087300 Sobic005G203100--Sobic003G087300 Sobic001G503100 Sobic001G503100 Sobic005G203100--Sobic001G503100 Sobic010G052700 Sobic010G052700 Sobic005G203100--Sobic010G052700 Sobic007G005700 Sobic007G005700 Sobic005G203100--Sobic007G005700 Sobic002G125700 Sobic002G125700 Sobic005G203100--Sobic002G125700 Sobic001G243600--Sobic004G273400 Sobic001G243600--Sobic005G213200 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400 Sobic006G275401--Sobic003G275501 Sobic008G079032 Sobic008G079032 Sobic006G275401--Sobic008G079032 Sobic010G005000 Sobic010G005000 Sobic006G275401--Sobic010G005000 Sobic001G101200 Sobic001G101200 Sobic006G275401--Sobic001G101200 Sobic002G116600 Sobic002G116600 Sobic006G275401--Sobic002G116600 Sobic004G152300 Sobic004G152300 Sobic006G275401--Sobic004G152300 Sobic006G275401--Sobic004G273400 Sobic008G181100 Sobic008G181100 Sobic006G275401--Sobic008G181100 Sobic009G196400 Sobic009G196400 Sobic006G275401--Sobic009G196400 Sobic004G245500 Sobic004G245500 Sobic003G088500--Sobic004G245500 Sobic001G025101 Sobic001G025101 Sobic003G088500--Sobic001G025101 Sobic005G051200 Sobic005G051200 Sobic003G088500--Sobic005G051200 Sobic009G164600 Sobic009G164600 Sobic003G088500--Sobic009G164600 Sobic003G088500--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic003G088500--Sobic002G416600 Sobic001G317200 Sobic001G317200 Sobic003G088500--Sobic001G317200 Sobic003G088500--Sobic003G240600 Sobic010G044400 Sobic010G044400 Sobic003G088500--Sobic010G044400 Sobic005G058800 Sobic005G058800 Sobic010G209900--Sobic005G058800 Sobic001G339700 Sobic001G339700 Sobic010G209900--Sobic001G339700 Sobic001G025300 Sobic001G025300 Sobic010G209900--Sobic001G025300 Sobic010G209900--Sobic005G084600 Sobic010G209900--Sobic001G100700 Sobic002G312900 Sobic002G312900 Sobic010G209900--Sobic002G312900 Sobic010G209900--Sobic009G120000 Sobic001G533400 Sobic001G533400 Sobic010G209900--Sobic001G533400 Sobic010G209900--Sobic001G444400 Sobic004G240600 Sobic004G240600 Sobic004G333150--Sobic004G240600 Sobic004G333150--Sobic010G052700 Sobic004G333150--Sobic003G087300 Sobic004G333150--Sobic009G106800 Sobic004G333150--Sobic005G203100 Sobic004G333150--Sobic004G273400 Sobic002G421800 Sobic002G421800 Sobic004G333150--Sobic002G421800 Sobic004G333150--Sobic009G196400 Sobic004G333150--Sobic001G100700
Octagon: transcription factors


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