Gene annotation
Transcriptome id Sobic.004G203000.1
Synonym Sb04g024930, CYP86C1
Functional annotation cytochrome P450, putative, expressed
UniProt C5XWK5
Pfam PF00067
Panther DB PTHR24296 PTHR24296:SF2
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K15402; fatty acid omega-hydroxylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G24540 : cytochrome P450, family 86, subfamily C, polypeptide 1
RAP-DB (Rice) LOC_Os02g38290.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a053392 , Zm00025a031852 , Zm00025a000546
Brachypodium KQK11570 , PNT63649 , KQK00171 , KQJ88537
Barley HORVU3Hr1G110180.1 , HORVU6Hr1G053810.2 , HORVU6Hr1G053810.1 , HORVU3Hr1G011830.1
Wheat TraesCS6B02G239400 , TraesCS6B02G239400 , TraesCS3B02G523800 , TraesCS6D02G193600 , TraesCS6A02G210500 , TraesCS3A02G479700
Populus -


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cDNA sequences
Sobic.004G203000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G097200 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.001G242200 MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
4 Sobic.010G038300 OsFBDUF33 - F-box and DUF domain containing protein, expressed -
5 Sobic.009G240500 lipase class 3 family protein, putative, expressed -
6 Sobic.007G041100 OsFBD16 - F-box and FBD domain containing protein, expressed -
7 Sobic.001G504800 expressed protein -
8 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
10 Sobic.002G013550 - K08770: ubiquitin C
11 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
12 Sobic.008G155000 ankyrin, putative, expressed -
13 Sobic.003G018000 expressed protein -
14 Sobic.009G048700 expressed protein -
15 Sobic.004G064800 haemolysin-III, putative, expressed K07297: adiponectin receptor
16 Sobic.004G003300 integral membrane protein DUF6 containing protein, expressed -
17 Sobic.009G017600 cupin domain containing protein, expressed -
18 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
19 Sobic.005G037600 - -
20 Sobic.001G103600 gp176, putative, expressed -


Gene co-expression network
sample Sobic004G203000 Sobic004G203000 Sobic002G097200 Sobic002G097200 Sobic004G203000--Sobic002G097200 Sobic001G242200 Sobic001G242200 Sobic004G203000--Sobic001G242200 Sobic006G199500 Sobic006G199500 Sobic004G203000--Sobic006G199500 Sobic010G038300 Sobic010G038300 Sobic004G203000--Sobic010G038300 Sobic009G240500 Sobic009G240500 Sobic004G203000--Sobic009G240500 Sobic007G041100 Sobic007G041100 Sobic004G203000--Sobic007G041100 Sobic001G504800 Sobic001G504800 Sobic004G203000--Sobic001G504800 Sobic004G002700 Sobic004G002700 Sobic004G203000--Sobic004G002700 Sobic004G168900 Sobic004G168900 Sobic004G203000--Sobic004G168900 Sobic002G060101 Sobic002G060101 Sobic002G097200--Sobic002G060101 Sobic005G037600 Sobic005G037600 Sobic002G097200--Sobic005G037600 Sobic002G097200--Sobic006G199500 Sobic009G048700 Sobic009G048700 Sobic002G097200--Sobic009G048700 Sobic002G097200--Sobic001G504800 Sobic002G097200--Sobic010G038300 Sobic002G097200--Sobic004G168900 Sobic009G145000 Sobic009G145000 Sobic002G097200--Sobic009G145000 Sobic003G005700 Sobic003G005700 Sobic002G097200--Sobic003G005700 Sobic001G242200--Sobic009G240500 Sobic002G013550 Sobic002G013550 Sobic001G242200--Sobic002G013550 Sobic008G071700 Sobic008G071700 Sobic001G242200--Sobic008G071700 Sobic005G006900 Sobic005G006900 Sobic001G242200--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic001G242200--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic001G242200--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic001G242200--Sobic005G212300 Sobic003G354850 Sobic003G354850 Sobic001G242200--Sobic003G354850 Sobic009G149100 Sobic009G149100 Sobic001G242200--Sobic009G149100 Sobic006G199500--Sobic009G048700 Sobic009G008000 Sobic009G008000 Sobic006G199500--Sobic009G008000 Sobic006G199500--Sobic002G097200 Sobic001G417700 Sobic001G417700 Sobic006G199500--Sobic001G417700 Sobic006G199500--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic006G199500--Sobic002G243400 Sobic004G020200 Sobic004G020200 Sobic006G199500--Sobic004G020200 Sobic001G136000 Sobic001G136000 Sobic006G199500--Sobic001G136000 Sobic008G155700 Sobic008G155700 Sobic006G199500--Sobic008G155700 Sobic007G063800 Sobic007G063800 Sobic010G038300--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic010G038300--Sobic005G202901 Sobic004G014200 Sobic004G014200 Sobic010G038300--Sobic004G014200 Sobic010G038300--Sobic002G060101 Sobic006G070032 Sobic006G070032 Sobic010G038300--Sobic006G070032 Sobic008G029800 Sobic008G029800 Sobic010G038300--Sobic008G029800 Sobic010G266600 Sobic010G266600 Sobic010G038300--Sobic010G266600 Sobic006G204500 Sobic006G204500 Sobic010G038300--Sobic006G204500 Sobic008G020800 Sobic008G020800 Sobic010G038300--Sobic008G020800 Sobic009G240500--Sobic001G242200 Sobic009G240500--Sobic009G149100 Sobic009G240500--Sobic005G006900 Sobic009G240500--Sobic008G071700 Sobic004G254700 Sobic004G254700 Sobic009G240500--Sobic004G254700 Sobic006G276600 Sobic006G276600 Sobic009G240500--Sobic006G276600 Sobic002G019300 Sobic002G019300 Sobic009G240500--Sobic002G019300 Sobic005G041500 Sobic005G041500 Sobic009G240500--Sobic005G041500 Sobic009G240500--Sobic004G002700 Sobic010G129450 Sobic010G129450 Sobic007G041100--Sobic010G129450 Sobic007G041100--Sobic005G037600 Sobic007G041100--Sobic002G060101 Sobic005G077001 Sobic005G077001 Sobic007G041100--Sobic005G077001 Sobic005G201501 Sobic005G201501 Sobic007G041100--Sobic005G201501 Sobic005G052400 Sobic005G052400 Sobic007G041100--Sobic005G052400 Sobic005G058600 Sobic005G058600 Sobic007G041100--Sobic005G058600 Sobic002G014300 Sobic002G014300 Sobic007G041100--Sobic002G014300 Sobic003G133201 Sobic003G133201 Sobic007G041100--Sobic003G133201 Sobic001G504800--Sobic005G037600 Sobic001G504800--Sobic002G060101 Sobic001G504800--Sobic002G097200 Sobic005G220250 Sobic005G220250 Sobic001G504800--Sobic005G220250 Sobic001G504800--Sobic009G048700 Sobic001G504800--Sobic007G041100 Sobic001G504800--Sobic006G199500 Sobic010G061600 Sobic010G061600 Sobic001G504800--Sobic010G061600 Sobic007G109301 Sobic007G109301 Sobic001G504800--Sobic007G109301 Sobic004G003300 Sobic004G003300 Sobic004G002700--Sobic004G003300 Sobic010G202400 Sobic010G202400 Sobic004G002700--Sobic010G202400 Sobic001G021200 Sobic001G021200 Sobic004G002700--Sobic001G021200 Sobic001G241700 Sobic001G241700 Sobic004G002700--Sobic001G241700 Sobic005G058000 Sobic005G058000 Sobic004G002700--Sobic005G058000 Sobic002G096600 Sobic002G096600 Sobic004G002700--Sobic002G096600 Sobic008G095500 Sobic008G095500 Sobic004G002700--Sobic008G095500 Sobic008G088500 Sobic008G088500 Sobic004G002700--Sobic008G088500 Sobic004G002700--Sobic009G149100 Sobic004G168900--Sobic009G048700 Sobic008G056600 Sobic008G056600 Sobic004G168900--Sobic008G056600 Sobic004G168900--Sobic010G038300 Sobic004G168900--Sobic002G097200 Sobic004G168900--Sobic001G417700 Sobic003G211800 Sobic003G211800 Sobic004G168900--Sobic003G211800 Sobic004G168900--Sobic009G145000 Sobic004G168900--Sobic002G243400 Sobic006G266400 Sobic006G266400 Sobic004G168900--Sobic006G266400
Octagon: transcription factors


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