Gene annotation
Transcriptome id Sobic.004G278100.1
Synonym Sb04g031500
Functional annotation DUF581 domain containing protein, expressed
UniProt A0A194YS39
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17670 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os02g46210.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010029 , Zm00025a021568
Brachypodium KQJ84259 , KQJ84260 , PNT69251
Barley HORVU2Hr1G105140.1 , HORVU2Hr1G105140.2 , HORVU6Hr1G066670.1 , HORVU6Hr1G066540.2
Wheat TraesCS6B02G289100 , TraesCS6A02G261800 , TraesCS6D02G242500
Populus PNT54593 , PNT54595 , PNT54594


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
2 Sobic.003G350700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
3 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
4 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
5 Sobic.010G234700 expressed protein -
6 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G252200 expressed protein -
8 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
9 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
10 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
11 Sobic.003G150400 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@homeodomain, putative, expressed -
12 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
13 Sobic.002G386000 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.004G199300 hypoxia-responsive family protein, putative, expressed -
15 Sobic.002G278500 nodulin, putative, expressed -
16 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
17 Sobic.010G076700 expressed protein -
18 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic004G278100 Sobic004G278100 Sobic001G398500 Sobic001G398500 Sobic004G278100--Sobic001G398500 Sobic003G350700 Sobic003G350700 Sobic004G278100--Sobic003G350700 Sobic009G071800 Sobic009G071800 Sobic004G278100--Sobic009G071800 Sobic009G231400 Sobic009G231400 Sobic004G278100--Sobic009G231400 Sobic010G234700 Sobic010G234700 Sobic004G278100--Sobic010G234700 Sobic001G077700 Sobic001G077700 Sobic004G278100--Sobic001G077700 Sobic002G252200 Sobic002G252200 Sobic004G278100--Sobic002G252200 Sobic004G228900 Sobic004G228900 Sobic004G278100--Sobic004G228900 Sobic009G163900 Sobic009G163900 Sobic004G278100--Sobic009G163900 Sobic001G398500--Sobic009G071800 Sobic002G217100 Sobic002G217100 Sobic001G398500--Sobic002G217100 Sobic006G184400 Sobic006G184400 Sobic001G398500--Sobic006G184400 Sobic003G150400 Sobic003G150400 Sobic001G398500--Sobic003G150400 Sobic009G184400 Sobic009G184400 Sobic001G398500--Sobic009G184400 Sobic001G476400 Sobic001G476400 Sobic001G398500--Sobic001G476400 Sobic001G209800 Sobic001G209800 Sobic001G398500--Sobic001G209800 Sobic001G398500--Sobic001G077700 Sobic010G076700 Sobic010G076700 Sobic001G398500--Sobic010G076700 Sobic003G350700--Sobic004G228900 Sobic003G350700--Sobic009G231400 Sobic001G338600 Sobic001G338600 Sobic003G350700--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic003G350700--Sobic005G122500 Sobic003G067800 Sobic003G067800 Sobic003G350700--Sobic003G067800 Sobic001G426000 Sobic001G426000 Sobic003G350700--Sobic001G426000 Sobic002G278500 Sobic002G278500 Sobic003G350700--Sobic002G278500 Sobic003G350700--Sobic009G163900 Sobic003G350700--Sobic010G234700 Sobic009G071800--Sobic001G077700 Sobic002G203000 Sobic002G203000 Sobic009G071800--Sobic002G203000 Sobic010G234600 Sobic010G234600 Sobic009G071800--Sobic010G234600 Sobic002G248100 Sobic002G248100 Sobic009G071800--Sobic002G248100 Sobic002G294700 Sobic002G294700 Sobic009G071800--Sobic002G294700 Sobic009G071800--Sobic010G076700 Sobic009G071800--Sobic001G398500 Sobic001G473900 Sobic001G473900 Sobic009G071800--Sobic001G473900 Sobic006G095600 Sobic006G095600 Sobic009G071800--Sobic006G095600 Sobic009G231400--Sobic009G163900 Sobic001G093200 Sobic001G093200 Sobic009G231400--Sobic001G093200 Sobic001G420100 Sobic001G420100 Sobic009G231400--Sobic001G420100 Sobic009G231400--Sobic010G076700 Sobic001G092600 Sobic001G092600 Sobic009G231400--Sobic001G092600 Sobic009G231400--Sobic003G350700 Sobic006G184800 Sobic006G184800 Sobic009G231400--Sobic006G184800 Sobic009G231400--Sobic005G122500 Sobic009G231400--Sobic002G203000 Sobic010G234700--Sobic010G234600 Sobic002G415600 Sobic002G415600 Sobic010G234700--Sobic002G415600 Sobic004G199300 Sobic004G199300 Sobic010G234700--Sobic004G199300 Sobic010G234700--Sobic001G077700 Sobic010G217800 Sobic010G217800 Sobic010G234700--Sobic010G217800 Sobic006G230900 Sobic006G230900 Sobic010G234700--Sobic006G230900 Sobic008G177800 Sobic008G177800 Sobic010G234700--Sobic008G177800 Sobic003G123600 Sobic003G123600 Sobic010G234700--Sobic003G123600 Sobic006G190500 Sobic006G190500 Sobic010G234700--Sobic006G190500 Sobic001G077700--Sobic009G071800 Sobic001G077700--Sobic010G234600 Sobic001G077700--Sobic002G203000 Sobic001G077700--Sobic002G248100 Sobic001G077700--Sobic002G294700 Sobic001G077700--Sobic008G177800 Sobic004G286600 Sobic004G286600 Sobic001G077700--Sobic004G286600 Sobic001G077700--Sobic010G234700 Sobic001G489600 Sobic001G489600 Sobic001G077700--Sobic001G489600 Sobic002G252200--Sobic004G278100 Sobic002G252200--Sobic009G071800 Sobic002G252200--Sobic009G231400 Sobic002G252200--Sobic001G398500 Sobic002G252200--Sobic001G077700 Sobic004G321000 Sobic004G321000 Sobic002G252200--Sobic004G321000 Sobic002G252200--Sobic003G350700 Sobic002G252200--Sobic009G163900 Sobic002G252200--Sobic010G076700 Sobic004G228900--Sobic005G122500 Sobic004G228900--Sobic001G426000 Sobic004G228900--Sobic002G278500 Sobic004G228900--Sobic001G338600 Sobic004G228900--Sobic003G350700 Sobic004G249900 Sobic004G249900 Sobic004G228900--Sobic004G249900 Sobic003G310700 Sobic003G310700 Sobic004G228900--Sobic003G310700 Sobic004G228900--Sobic010G234700 Sobic010G104300 Sobic010G104300 Sobic004G228900--Sobic010G104300 Sobic009G163900--Sobic009G231400 Sobic009G163900--Sobic001G092600 Sobic009G163900--Sobic006G184800 Sobic006G005600 Sobic006G005600 Sobic009G163900--Sobic006G005600 Sobic006G055600 Sobic006G055600 Sobic009G163900--Sobic006G055600 Sobic009G163900--Sobic004G321000 Sobic009G163900--Sobic010G076700 Sobic004G245850 Sobic004G245850 Sobic009G163900--Sobic004G245850 Sobic004G278200 Sobic004G278200 Sobic009G163900--Sobic004G278200
Octagon: transcription factors


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