Gene annotation
Transcriptome id Sobic.004G280100.1
Synonym Sb04g031670
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y0X1
Pfam -
Panther DB PTHR26312 PTHR26312:SF85
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37400 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os02g45880.1 : expressed protein
MaizeGDB (Corn) Zm00025a021548
Brachypodium -
Barley HORVU6Hr1G066250.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
2 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
3 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
4 Sobic.004G343100 YCF37, putative, expressed -
5 Sobic.010G199000 bZIP transcription factor domain containing protein, expressed -
6 Sobic.002G056800 YGGT family protein, putative, expressed -
7 Sobic.001G006400 DANA2, putative, expressed -
8 Sobic.001G308800 expressed protein K18065: Cdc25 family phosphatase
9 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
10 Sobic.001G175700 expressed protein -
11 Sobic.008G119300 - -
12 Sobic.006G125000 expressed protein -
13 Sobic.010G265500 expressed protein -
14 Sobic.001G447700 expressed protein -
15 Sobic.006G067500 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.007G123800 DUF581 domain containing protein, expressed -
17 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
18 Sobic.004G028200 UP-9A, putative, expressed -
19 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
20 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -


Gene co-expression network
sample Sobic004G280100 Sobic004G280100 Sobic001G295300 Sobic001G295300 Sobic004G280100--Sobic001G295300 Sobic003G022300 Sobic003G022300 Sobic004G280100--Sobic003G022300 Sobic001G196200 Sobic001G196200 Sobic004G280100--Sobic001G196200 Sobic004G343100 Sobic004G343100 Sobic004G280100--Sobic004G343100 Sobic010G199000 Sobic010G199000 Sobic004G280100--Sobic010G199000 Sobic002G056800 Sobic002G056800 Sobic004G280100--Sobic002G056800 Sobic001G006400 Sobic001G006400 Sobic004G280100--Sobic001G006400 Sobic001G308800 Sobic001G308800 Sobic004G280100--Sobic001G308800 Sobic009G131800 Sobic009G131800 Sobic004G280100--Sobic009G131800 Sobic001G291900 Sobic001G291900 Sobic001G295300--Sobic001G291900 Sobic003G008900 Sobic003G008900 Sobic001G295300--Sobic003G008900 Sobic001G295300--Sobic001G308800 Sobic001G447700 Sobic001G447700 Sobic001G295300--Sobic001G447700 Sobic001G295300--Sobic001G006400 Sobic007G208300 Sobic007G208300 Sobic001G295300--Sobic007G208300 Sobic001G295300--Sobic003G022300 Sobic004G227200 Sobic004G227200 Sobic001G295300--Sobic004G227200 Sobic001G104800 Sobic001G104800 Sobic001G295300--Sobic001G104800 Sobic002G227700 Sobic002G227700 Sobic003G022300--Sobic002G227700 Sobic004G020300 Sobic004G020300 Sobic003G022300--Sobic004G020300 Sobic001G221300 Sobic001G221300 Sobic003G022300--Sobic001G221300 Sobic003G022300--Sobic001G295300 Sobic009G210200 Sobic009G210200 Sobic003G022300--Sobic009G210200 Sobic001G033100 Sobic001G033100 Sobic003G022300--Sobic001G033100 Sobic006G067400 Sobic006G067400 Sobic003G022300--Sobic006G067400 Sobic004G343900 Sobic004G343900 Sobic003G022300--Sobic004G343900 Sobic007G004700 Sobic007G004700 Sobic003G022300--Sobic007G004700 Sobic001G196200--Sobic002G056800 Sobic002G131700 Sobic002G131700 Sobic001G196200--Sobic002G131700 Sobic003G254600 Sobic003G254600 Sobic001G196200--Sobic003G254600 Sobic003G310100 Sobic003G310100 Sobic001G196200--Sobic003G310100 Sobic006G111600 Sobic006G111600 Sobic001G196200--Sobic006G111600 Sobic005G002900 Sobic005G002900 Sobic001G196200--Sobic005G002900 Sobic009G028400 Sobic009G028400 Sobic001G196200--Sobic009G028400 Sobic004G179200 Sobic004G179200 Sobic001G196200--Sobic004G179200 Sobic002G424100 Sobic002G424100 Sobic001G196200--Sobic002G424100 Sobic008G063100 Sobic008G063100 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic005G021600 Sobic005G021600 Sobic004G343100--Sobic005G021600 Sobic003G421400 Sobic003G421400 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic010G199000--Sobic001G221300 Sobic010G199000--Sobic010G265500 Sobic010G199000--Sobic004G343100 Sobic010G199000--Sobic001G295300 Sobic010G199000--Sobic003G022300 Sobic010G199000--Sobic003G008900 Sobic010G199000--Sobic004G280100 Sobic010G199000--Sobic003G187000 Sobic010G199000--Sobic001G308800 Sobic002G056800--Sobic001G196200 Sobic002G056800--Sobic003G310100 Sobic002G056800--Sobic002G424100 Sobic002G056800--Sobic005G002900 Sobic009G131600 Sobic009G131600 Sobic002G056800--Sobic009G131600 Sobic006G055800 Sobic006G055800 Sobic002G056800--Sobic006G055800 Sobic003G085000 Sobic003G085000 Sobic002G056800--Sobic003G085000 Sobic002G056800--Sobic002G131700 Sobic001G281500 Sobic001G281500 Sobic002G056800--Sobic001G281500 Sobic001G006400--Sobic001G295300 Sobic001G006400--Sobic001G308800 Sobic008G063200 Sobic008G063200 Sobic001G006400--Sobic008G063200 Sobic002G102200 Sobic002G102200 Sobic001G006400--Sobic002G102200 Sobic003G291400 Sobic003G291400 Sobic001G006400--Sobic003G291400 Sobic001G006400--Sobic003G008900 Sobic001G006400--Sobic001G447700 Sobic003G439100 Sobic003G439100 Sobic001G006400--Sobic003G439100 Sobic008G186400 Sobic008G186400 Sobic001G006400--Sobic008G186400 Sobic001G029100 Sobic001G029100 Sobic001G308800--Sobic001G029100 Sobic009G143100 Sobic009G143100 Sobic001G308800--Sobic009G143100 Sobic001G308800--Sobic001G295300 Sobic001G308800--Sobic001G447700 Sobic001G308800--Sobic001G104800 Sobic001G308800--Sobic001G291900 Sobic002G033800 Sobic002G033800 Sobic001G308800--Sobic002G033800 Sobic004G183100 Sobic004G183100 Sobic001G308800--Sobic004G183100 Sobic009G030900 Sobic009G030900 Sobic001G308800--Sobic009G030900 Sobic001G175700 Sobic001G175700 Sobic009G131800--Sobic001G175700 Sobic004G055000 Sobic004G055000 Sobic009G131800--Sobic004G055000 Sobic002G272100 Sobic002G272100 Sobic009G131800--Sobic002G272100 Sobic009G131800--Sobic004G020300 Sobic004G343000 Sobic004G343000 Sobic009G131800--Sobic004G343000 Sobic001G405700 Sobic001G405700 Sobic009G131800--Sobic001G405700 Sobic008G172700 Sobic008G172700 Sobic009G131800--Sobic008G172700 Sobic003G408000 Sobic003G408000 Sobic009G131800--Sobic003G408000 Sobic002G267900 Sobic002G267900 Sobic009G131800--Sobic002G267900
Octagon: transcription factors


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