Gene annotation
Transcriptome id Sobic.005G014800.1
Synonym ethylene response factor 57, SbERF57, ERF104, Sb05g001280
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1Z5RHA0
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G27950 : cytokinin response factor 4
RAP-DB (Rice) LOC_Os05g25260.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000950 , Zm00025a035951 , Zm00025a010335 , Zm00025a010338 , Zm00025a022855 , Zm00025a033320 , Zm00025a033098 , Zm00025a045437
Brachypodium KQK09018 , KQK19497 , KQJ98221 , KQJ91651 , KQJ94688
Barley HORVU5Hr1G079980.1 , HORVU3Hr1G030310.1 , HORVU4Hr1G079630.1 , HORVU4Hr1G000960.1 , HORVU0Hr1G013490.1
Wheat -
Populus -


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cDNA sequences
Sobic.005G014800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
2 Sobic.006G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed -
3 Sobic.004G070100 exostosin family domain containing protein, expressed -
4 Sobic.006G219801 - -
5 Sobic.001G120200 OsFBDUF16 - F-box and DUF domain containing protein, expressed -
6 Sobic.004G051600 EMB2758, putative, expressed -
7 Sobic.005G170200 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
8 Sobic.009G063200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein of unknown function domain containing protein, expressed -
9 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
10 Sobic.003G200000 respiratory burst oxidase, putative, expressed -
11 Sobic.001G327100 OsFBX157 - F-box domain containing protein, expressed -
12 Sobic.005G138800 expressed protein -
13 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
14 Sobic.001G179500 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.010G123100 transporter-related, putative, expressed -
16 Sobic.004G027150 - -
17 Sobic.006G045100 - -
18 Sobic.008G188800 ankyrin repeat domain-containing protein, putative, expressed -
19 Sobic.010G181701 - -
20 Sobic.001G023600 YIF1B, putative, expressed -


Gene co-expression network
sample Sobic005G014800 Sobic005G014800 Sobic005G045800 Sobic005G045800 Sobic005G014800--Sobic005G045800 Sobic006G188600 Sobic006G188600 Sobic005G014800--Sobic006G188600 Sobic004G070100 Sobic004G070100 Sobic005G014800--Sobic004G070100 Sobic006G219801 Sobic006G219801 Sobic005G014800--Sobic006G219801 Sobic001G120200 Sobic001G120200 Sobic005G014800--Sobic001G120200 Sobic004G051600 Sobic004G051600 Sobic005G014800--Sobic004G051600 Sobic005G170200 Sobic005G170200 Sobic005G014800--Sobic005G170200 Sobic009G063200 Sobic009G063200 Sobic005G014800--Sobic009G063200 Sobic009G214500 Sobic009G214500 Sobic005G014800--Sobic009G214500 Sobic003G352900 Sobic003G352900 Sobic005G045800--Sobic003G352900 Sobic003G376900 Sobic003G376900 Sobic005G045800--Sobic003G376900 Sobic001G385300 Sobic001G385300 Sobic005G045800--Sobic001G385300 Sobic002G299500 Sobic002G299500 Sobic005G045800--Sobic002G299500 Sobic001G131900 Sobic001G131900 Sobic005G045800--Sobic001G131900 Sobic003G200000 Sobic003G200000 Sobic005G045800--Sobic003G200000 Sobic008G171900 Sobic008G171900 Sobic005G045800--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic005G045800--Sobic009G163100 Sobic007G144100 Sobic007G144100 Sobic005G045800--Sobic007G144100 Sobic010G057600 Sobic010G057600 Sobic006G188600--Sobic010G057600 Sobic001G153500 Sobic001G153500 Sobic006G188600--Sobic001G153500 Sobic006G218200 Sobic006G218200 Sobic006G188600--Sobic006G218200 Sobic010G263400 Sobic010G263400 Sobic006G188600--Sobic010G263400 Sobic004G014500 Sobic004G014500 Sobic006G188600--Sobic004G014500 Sobic001G186700 Sobic001G186700 Sobic006G188600--Sobic001G186700 Sobic006G188600--Sobic005G170200 Sobic003G072700 Sobic003G072700 Sobic006G188600--Sobic003G072700 Sobic009G180600 Sobic009G180600 Sobic006G188600--Sobic009G180600 Sobic003G354500 Sobic003G354500 Sobic004G070100--Sobic003G354500 Sobic010G123100 Sobic010G123100 Sobic004G070100--Sobic010G123100 Sobic004G353300 Sobic004G353300 Sobic004G070100--Sobic004G353300 Sobic008G047500 Sobic008G047500 Sobic004G070100--Sobic008G047500 Sobic007G096800 Sobic007G096800 Sobic004G070100--Sobic007G096800 Sobic003G359400 Sobic003G359400 Sobic004G070100--Sobic003G359400 Sobic003G204100 Sobic003G204100 Sobic004G070100--Sobic003G204100 Sobic010G038200 Sobic010G038200 Sobic004G070100--Sobic010G038200 Sobic004G000400 Sobic004G000400 Sobic004G070100--Sobic004G000400 Sobic006G219801--Sobic004G051600 Sobic010G181701 Sobic010G181701 Sobic006G219801--Sobic010G181701 Sobic004G298600 Sobic004G298600 Sobic006G219801--Sobic004G298600 Sobic001G457500 Sobic001G457500 Sobic006G219801--Sobic001G457500 Sobic009G047066 Sobic009G047066 Sobic006G219801--Sobic009G047066 Sobic002G339666 Sobic002G339666 Sobic006G219801--Sobic002G339666 Sobic006G219801--Sobic001G385300 Sobic006G219801--Sobic009G163100 Sobic006G219801--Sobic010G123100 Sobic003G284100 Sobic003G284100 Sobic001G120200--Sobic003G284100 Sobic003G335300 Sobic003G335300 Sobic001G120200--Sobic003G335300 Sobic001G482800 Sobic001G482800 Sobic001G120200--Sobic001G482800 Sobic002G248700 Sobic002G248700 Sobic001G120200--Sobic002G248700 Sobic001G365700 Sobic001G365700 Sobic001G120200--Sobic001G365700 Sobic004G279200 Sobic004G279200 Sobic001G120200--Sobic004G279200 Sobic006G128200 Sobic006G128200 Sobic001G120200--Sobic006G128200 Sobic001G120200--Sobic010G263400 Sobic005G185200 Sobic005G185200 Sobic001G120200--Sobic005G185200 Sobic003G057050 Sobic003G057050 Sobic004G051600--Sobic003G057050 Sobic002G362500 Sobic002G362500 Sobic004G051600--Sobic002G362500 Sobic008G095900 Sobic008G095900 Sobic004G051600--Sobic008G095900 Sobic002G414800 Sobic002G414800 Sobic004G051600--Sobic002G414800 Sobic008G166100 Sobic008G166100 Sobic004G051600--Sobic008G166100 Sobic001G308500 Sobic001G308500 Sobic004G051600--Sobic001G308500 Sobic004G051600--Sobic009G163100 Sobic004G051600--Sobic006G219801 Sobic006G071362 Sobic006G071362 Sobic004G051600--Sobic006G071362 Sobic001G144150 Sobic001G144150 Sobic005G170200--Sobic001G144150 Sobic010G263700 Sobic010G263700 Sobic005G170200--Sobic010G263700 Sobic005G170200--Sobic001G186700 Sobic001G034200 Sobic001G034200 Sobic005G170200--Sobic001G034200 Sobic005G074300 Sobic005G074300 Sobic005G170200--Sobic005G074300 Sobic004G038400 Sobic004G038400 Sobic005G170200--Sobic004G038400 Sobic003G005700 Sobic003G005700 Sobic005G170200--Sobic003G005700 Sobic003G048400 Sobic003G048400 Sobic005G170200--Sobic003G048400 Sobic006G070564 Sobic006G070564 Sobic005G170200--Sobic006G070564 Sobic002G217800 Sobic002G217800 Sobic009G063200--Sobic002G217800 Sobic010G217700 Sobic010G217700 Sobic009G063200--Sobic010G217700 Sobic009G063200--Sobic002G248700 Sobic002G298201 Sobic002G298201 Sobic009G063200--Sobic002G298201 Sobic006G256700 Sobic006G256700 Sobic009G063200--Sobic006G256700 Sobic003G065700 Sobic003G065700 Sobic009G063200--Sobic003G065700 Sobic004G288000 Sobic004G288000 Sobic009G063200--Sobic004G288000 Sobic004G250800 Sobic004G250800 Sobic009G063200--Sobic004G250800 Sobic005G077600 Sobic005G077600 Sobic009G063200--Sobic005G077600 Sobic007G102300 Sobic007G102300 Sobic009G214500--Sobic007G102300 Sobic009G214500--Sobic001G385300 Sobic007G102000 Sobic007G102000 Sobic009G214500--Sobic007G102000 Sobic009G214500--Sobic009G163100 Sobic001G327100 Sobic001G327100 Sobic009G214500--Sobic001G327100 Sobic001G380700 Sobic001G380700 Sobic009G214500--Sobic001G380700 Sobic009G214500--Sobic003G376900 Sobic004G241300 Sobic004G241300 Sobic009G214500--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic009G214500--Sobic003G423700
Octagon: transcription factors


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