Gene annotation
Transcriptome id Sobic.005G132600.1,Sobic.005G132600.2,Sobic.005G132600.3
Synonym Sb05g019620
Functional annotation expressed protein
UniProt A0A1B6PS72 , A0A1B6PTF3
Pfam -
Panther DB PTHR32212:SF133 PTHR32212 PTHR32212 PTHR32212:SF133
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58940 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g32360.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G044900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -
2 Sobic.001G275300 - K10899: ATP-dependent DNA helicase Q1
3 Sobic.009G019800 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.001G292900 expressed protein -
5 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
6 Sobic.010G186100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.005G145550 - -
8 Sobic.003G241700 SET domain containing protein, expressed -
9 Sobic.007G163001 - -
10 Sobic.004G324700 - -
11 Sobic.007G000300 expressed protein -
12 Sobic.004G172500 expressed protein -
13 Sobic.004G213800 expressed protein -
14 Sobic.004G344000 expressed protein -
15 Sobic.001G145000 expressed protein K14376: poly(A) polymerase
16 Sobic.008G021400 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
17 Sobic.007G188800 "Candidate orthologue to the wheat Pm40 gene, Disease resistance RGA1"(PubMedID : 27755575)@CC-NBS-LRR, putative, expressed -
18 Sobic.010G273300 Leucine Rich Repeat family protein, expressed -
19 Sobic.002G031900 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed -
20 Sobic.007G016800 OsFBL26 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic005G132600 Sobic005G132600 Sobic008G044900 Sobic008G044900 Sobic005G132600--Sobic008G044900 Sobic001G275300 Sobic001G275300 Sobic005G132600--Sobic001G275300 Sobic009G019800 Sobic009G019800 Sobic005G132600--Sobic009G019800 Sobic001G292900 Sobic001G292900 Sobic005G132600--Sobic001G292900 Sobic010G244900 Sobic010G244900 Sobic005G132600--Sobic010G244900 Sobic010G186100 Sobic010G186100 Sobic005G132600--Sobic010G186100 Sobic005G145550 Sobic005G145550 Sobic005G132600--Sobic005G145550 Sobic003G241700 Sobic003G241700 Sobic005G132600--Sobic003G241700 Sobic007G163001 Sobic007G163001 Sobic005G132600--Sobic007G163001 Sobic010G273300 Sobic010G273300 Sobic008G044900--Sobic010G273300 Sobic008G021400 Sobic008G021400 Sobic008G044900--Sobic008G021400 Sobic008G044900--Sobic005G132600 Sobic007G188800 Sobic007G188800 Sobic008G044900--Sobic007G188800 Sobic010G121100 Sobic010G121100 Sobic008G044900--Sobic010G121100 Sobic008G044900--Sobic005G145550 Sobic001G475100 Sobic001G475100 Sobic008G044900--Sobic001G475100 Sobic001G340000 Sobic001G340000 Sobic008G044900--Sobic001G340000 Sobic008G033900 Sobic008G033900 Sobic008G044900--Sobic008G033900 Sobic006G088200 Sobic006G088200 Sobic001G275300--Sobic006G088200 Sobic003G214600 Sobic003G214600 Sobic001G275300--Sobic003G214600 Sobic007G000300 Sobic007G000300 Sobic001G275300--Sobic007G000300 Sobic003G095900 Sobic003G095900 Sobic001G275300--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic001G275300--Sobic006G056700 Sobic004G158400 Sobic004G158400 Sobic001G275300--Sobic004G158400 Sobic001G058200 Sobic001G058200 Sobic001G275300--Sobic001G058200 Sobic007G159900 Sobic007G159900 Sobic001G275300--Sobic007G159900 Sobic005G167700 Sobic005G167700 Sobic001G275300--Sobic005G167700 Sobic009G019800--Sobic005G132600 Sobic003G251100 Sobic003G251100 Sobic009G019800--Sobic003G251100 Sobic009G019800--Sobic010G121100 Sobic009G019800--Sobic010G273300 Sobic003G207500 Sobic003G207500 Sobic009G019800--Sobic003G207500 Sobic009G019800--Sobic007G163001 Sobic004G130964 Sobic004G130964 Sobic009G019800--Sobic004G130964 Sobic001G159032 Sobic001G159032 Sobic009G019800--Sobic001G159032 Sobic009G019800--Sobic007G188800 Sobic001G292900--Sobic008G021400 Sobic003G433400 Sobic003G433400 Sobic001G292900--Sobic003G433400 Sobic003G213400 Sobic003G213400 Sobic001G292900--Sobic003G213400 Sobic003G163301 Sobic003G163301 Sobic001G292900--Sobic003G163301 Sobic002G084800 Sobic002G084800 Sobic001G292900--Sobic002G084800 Sobic009G217400 Sobic009G217400 Sobic001G292900--Sobic009G217400 Sobic002G198100 Sobic002G198100 Sobic001G292900--Sobic002G198100 Sobic009G026300 Sobic009G026300 Sobic001G292900--Sobic009G026300 Sobic003G092800 Sobic003G092800 Sobic001G292900--Sobic003G092800 Sobic004G172500 Sobic004G172500 Sobic010G244900--Sobic004G172500 Sobic002G292900 Sobic002G292900 Sobic010G244900--Sobic002G292900 Sobic004G213800 Sobic004G213800 Sobic010G244900--Sobic004G213800 Sobic001G237600 Sobic001G237600 Sobic010G244900--Sobic001G237600 Sobic004G320700 Sobic004G320700 Sobic010G244900--Sobic004G320700 Sobic006G039400 Sobic006G039400 Sobic010G244900--Sobic006G039400 Sobic003G043000 Sobic003G043000 Sobic010G244900--Sobic003G043000 Sobic010G244900--Sobic003G241700 Sobic005G150600 Sobic005G150600 Sobic010G244900--Sobic005G150600 Sobic010G186100--Sobic004G320700 Sobic010G186100--Sobic010G244900 Sobic002G031900 Sobic002G031900 Sobic010G186100--Sobic002G031900 Sobic006G032300 Sobic006G032300 Sobic010G186100--Sobic006G032300 Sobic010G186100--Sobic001G237600 Sobic010G186100--Sobic002G292900 Sobic010G071100 Sobic010G071100 Sobic010G186100--Sobic010G071100 Sobic004G209700 Sobic004G209700 Sobic010G186100--Sobic004G209700 Sobic003G329900 Sobic003G329900 Sobic010G186100--Sobic003G329900 Sobic005G189300 Sobic005G189300 Sobic005G145550--Sobic005G189300 Sobic005G145550--Sobic007G163001 Sobic004G324700 Sobic004G324700 Sobic005G145550--Sobic004G324700 Sobic005G145550--Sobic001G475100 Sobic005G145550--Sobic003G207500 Sobic005G145550--Sobic002G031900 Sobic005G145550--Sobic007G188800 Sobic003G179350 Sobic003G179350 Sobic005G145550--Sobic003G179350 Sobic004G111300 Sobic004G111300 Sobic005G145550--Sobic004G111300 Sobic003G241700--Sobic003G043000 Sobic003G296900 Sobic003G296900 Sobic003G241700--Sobic003G296900 Sobic009G228000 Sobic009G228000 Sobic003G241700--Sobic009G228000 Sobic003G241700--Sobic004G209700 Sobic004G265500 Sobic004G265500 Sobic003G241700--Sobic004G265500 Sobic010G000800 Sobic010G000800 Sobic003G241700--Sobic010G000800 Sobic006G234700 Sobic006G234700 Sobic003G241700--Sobic006G234700 Sobic003G241700--Sobic004G213800 Sobic010G034100 Sobic010G034100 Sobic003G241700--Sobic010G034100 Sobic007G163001--Sobic003G207500 Sobic007G163001--Sobic005G145550 Sobic007G163001--Sobic003G251100 Sobic007G163001--Sobic007G188800 Sobic007G163001--Sobic004G324700 Sobic010G214500 Sobic010G214500 Sobic007G163001--Sobic010G214500 Sobic007G163001--Sobic001G475100 Sobic008G111200 Sobic008G111200 Sobic007G163001--Sobic008G111200 Sobic007G163001--Sobic002G031900
Octagon: transcription factors


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