Gene annotation
Transcriptome id Sobic.010G273300.1
Synonym RPS2
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A194YLS5
Pfam -
Panther DB PTHR23155 PTHR23155:SF498
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26090 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g02520.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G044900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -
2 Sobic.008G021400 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
3 Sobic.010G205600 Leucine Rich Repeat family protein, expressed -
4 Sobic.001G475100 expressed protein -
5 Sobic.007G188800 "Candidate orthologue to the wheat Pm40 gene, Disease resistance RGA1"(PubMedID : 27755575)@CC-NBS-LRR, putative, expressed -
6 Sobic.001G340000 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
7 Sobic.010G121100 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.005G061900 - K10896: fanconi anemia group M protein
9 Sobic.005G188300 expressed protein -
10 Sobic.005G145550 - -
11 Sobic.005G102900 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.010G089800 expressed protein -
13 Sobic.008G033900 PHD-finger family protein, expressed -
14 Sobic.001G475200 expressed protein -
15 Sobic.002G071300 - -
16 Sobic.010G135250 - -
17 Sobic.003G251100 - -
18 Sobic.004G324300 expressed protein -
19 Sobic.006G057600 - -
20 Sobic.003G207500 signal peptide peptidase domain containing protein, expressed -


Gene co-expression network
sample Sobic010G273300 Sobic010G273300 Sobic008G044900 Sobic008G044900 Sobic010G273300--Sobic008G044900 Sobic008G021400 Sobic008G021400 Sobic010G273300--Sobic008G021400 Sobic010G205600 Sobic010G205600 Sobic010G273300--Sobic010G205600 Sobic001G475100 Sobic001G475100 Sobic010G273300--Sobic001G475100 Sobic007G188800 Sobic007G188800 Sobic010G273300--Sobic007G188800 Sobic001G340000 Sobic001G340000 Sobic010G273300--Sobic001G340000 Sobic010G121100 Sobic010G121100 Sobic010G273300--Sobic010G121100 Sobic005G061900 Sobic005G061900 Sobic010G273300--Sobic005G061900 Sobic005G188300 Sobic005G188300 Sobic010G273300--Sobic005G188300 Sobic008G044900--Sobic010G273300 Sobic008G044900--Sobic008G021400 Sobic005G132600 Sobic005G132600 Sobic008G044900--Sobic005G132600 Sobic008G044900--Sobic007G188800 Sobic008G044900--Sobic010G121100 Sobic005G145550 Sobic005G145550 Sobic008G044900--Sobic005G145550 Sobic008G044900--Sobic001G475100 Sobic008G044900--Sobic001G340000 Sobic008G033900 Sobic008G033900 Sobic008G044900--Sobic008G033900 Sobic008G021400--Sobic010G273300 Sobic001G292900 Sobic001G292900 Sobic008G021400--Sobic001G292900 Sobic008G021400--Sobic001G340000 Sobic008G021400--Sobic008G044900 Sobic002G031900 Sobic002G031900 Sobic008G021400--Sobic002G031900 Sobic008G021400--Sobic010G121100 Sobic009G217400 Sobic009G217400 Sobic008G021400--Sobic009G217400 Sobic008G021400--Sobic005G145550 Sobic001G475200 Sobic001G475200 Sobic008G021400--Sobic001G475200 Sobic010G205600--Sobic010G273300 Sobic010G089800 Sobic010G089800 Sobic010G205600--Sobic010G089800 Sobic002G308700 Sobic002G308700 Sobic010G205600--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic010G205600--Sobic005G162500 Sobic004G248600 Sobic004G248600 Sobic010G205600--Sobic004G248600 Sobic001G192000 Sobic001G192000 Sobic010G205600--Sobic001G192000 Sobic009G255700 Sobic009G255700 Sobic010G205600--Sobic009G255700 Sobic003G186000 Sobic003G186000 Sobic010G205600--Sobic003G186000 Sobic010G169600 Sobic010G169600 Sobic010G205600--Sobic010G169600 Sobic001G475100--Sobic005G145550 Sobic001G475100--Sobic005G188300 Sobic007G163001 Sobic007G163001 Sobic001G475100--Sobic007G163001 Sobic006G057600 Sobic006G057600 Sobic001G475100--Sobic006G057600 Sobic003G207500 Sobic003G207500 Sobic001G475100--Sobic003G207500 Sobic001G475100--Sobic010G273300 Sobic001G475100--Sobic010G121100 Sobic001G475100--Sobic007G188800 Sobic008G111200 Sobic008G111200 Sobic001G475100--Sobic008G111200 Sobic007G188800--Sobic007G163001 Sobic007G188800--Sobic003G207500 Sobic007G188800--Sobic005G145550 Sobic003G251100 Sobic003G251100 Sobic007G188800--Sobic003G251100 Sobic007G188800--Sobic010G273300 Sobic007G188800--Sobic001G475100 Sobic005G102900 Sobic005G102900 Sobic007G188800--Sobic005G102900 Sobic010G214500 Sobic010G214500 Sobic007G188800--Sobic010G214500 Sobic005G189300 Sobic005G189300 Sobic007G188800--Sobic005G189300 Sobic001G340000--Sobic005G061900 Sobic003G043000 Sobic003G043000 Sobic001G340000--Sobic003G043000 Sobic002G363800 Sobic002G363800 Sobic001G340000--Sobic002G363800 Sobic003G256800 Sobic003G256800 Sobic001G340000--Sobic003G256800 Sobic004G265500 Sobic004G265500 Sobic001G340000--Sobic004G265500 Sobic001G030000 Sobic001G030000 Sobic001G340000--Sobic001G030000 Sobic003G163200 Sobic003G163200 Sobic001G340000--Sobic003G163200 Sobic006G026250 Sobic006G026250 Sobic001G340000--Sobic006G026250 Sobic001G340000--Sobic010G273300 Sobic010G121100--Sobic001G475100 Sobic010G121100--Sobic010G273300 Sobic010G121100--Sobic005G145550 Sobic010G121100--Sobic010G205600 Sobic007G185300 Sobic007G185300 Sobic010G121100--Sobic007G185300 Sobic010G121100--Sobic008G021400 Sobic010G121100--Sobic007G163001 Sobic010G121100--Sobic005G102900 Sobic002G424700 Sobic002G424700 Sobic010G121100--Sobic002G424700 Sobic005G061900--Sobic001G340000 Sobic004G213800 Sobic004G213800 Sobic005G061900--Sobic004G213800 Sobic004G053500 Sobic004G053500 Sobic005G061900--Sobic004G053500 Sobic005G061900--Sobic010G273300 Sobic001G450000 Sobic001G450000 Sobic005G061900--Sobic001G450000 Sobic003G388000 Sobic003G388000 Sobic005G061900--Sobic003G388000 Sobic002G371600 Sobic002G371600 Sobic005G061900--Sobic002G371600 Sobic005G061900--Sobic010G205600 Sobic005G061900--Sobic003G163200 Sobic005G188300--Sobic001G475100 Sobic009G043100 Sobic009G043100 Sobic005G188300--Sobic009G043100 Sobic005G188300--Sobic005G145550 Sobic005G188300--Sobic001G340000 Sobic005G188300--Sobic008G111200 Sobic005G188300--Sobic010G273300 Sobic005G188300--Sobic007G163001 Sobic005G188300--Sobic005G189300 Sobic004G324300 Sobic004G324300 Sobic005G188300--Sobic004G324300
Octagon: transcription factors


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