Gene annotation
Transcriptome id Sobic.010G089800.2
Synonym
Functional annotation expressed protein
UniProt C5Z701
Pfam -
Panther DB PTHR13315 PTHR13315:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g11910.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK18914
Barley HORVU7Hr1G037270.17 , HORVU7Hr1G037270.14 , HORVU7Hr1G037270.12 , HORVU7Hr1G037270.13 , HORVU7Hr1G037270.11 , HORVU7Hr1G037270.5 , HORVU7Hr1G037270.2 , HORVU7Hr1G037270.8 , HORVU7Hr1G037270.9
Wheat TraesCS7D02G183000 , TraesCS7D02G183000 , TraesCS7A02G181400 , TraesCS7A02G181400 , TraesCS7A02G181400 , TraesCS7A02G181400 , TraesCS7B02G086500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
2 Sobic.010G205600 Leucine Rich Repeat family protein, expressed -
3 Sobic.006G036100 expressed protein K11266: MAternally affected uncoordination
4 Sobic.001G453000 no apical meristem protein, putative, expressed -
5 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
6 Sobic.001G004400 - K14290: XPO1, exportin-1
7 Sobic.010G188000 elongation factor, putative, expressed K12852: 116 kDa U5 small nuclear ribonucleoprotein component
8 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
9 Sobic.006G169500 L-asparaginase precursor protein, putative, expressed K01444: AGA, N4-(beta-N-acetylglucosaminyl)-L-asparaginase
10 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3
11 Sobic.006G268600 SAR DNA-binding protein-like, putative, expressed -
12 Sobic.006G188500 uncharacterized mscS family protein, putative, expressed -
13 Sobic.010G174700 expressed protein -
14 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
15 Sobic.004G034700 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
16 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
17 Sobic.001G536000 actin, putative, expressed K11340: ACTL6A, actin-like protein 6A
18 Sobic.002G340200 expressed protein -
19 Sobic.010G262100 expressed protein -
20 Sobic.003G188300 expressed protein -


Gene co-expression network
sample Sobic010G089800 Sobic010G089800 Sobic006G080400 Sobic006G080400 Sobic010G089800--Sobic006G080400 Sobic010G205600 Sobic010G205600 Sobic010G089800--Sobic010G205600 Sobic006G036100 Sobic006G036100 Sobic010G089800--Sobic006G036100 Sobic001G453000 Sobic001G453000 Sobic010G089800--Sobic001G453000 Sobic001G451300 Sobic001G451300 Sobic010G089800--Sobic001G451300 Sobic001G004400 Sobic001G004400 Sobic010G089800--Sobic001G004400 Sobic010G188000 Sobic010G188000 Sobic010G089800--Sobic010G188000 Sobic001G248100 Sobic001G248100 Sobic010G089800--Sobic001G248100 Sobic006G169500 Sobic006G169500 Sobic010G089800--Sobic006G169500 Sobic008G002500 Sobic008G002500 Sobic006G080400--Sobic008G002500 Sobic001G461400 Sobic001G461400 Sobic006G080400--Sobic001G461400 Sobic004G155600 Sobic004G155600 Sobic006G080400--Sobic004G155600 Sobic002G405500 Sobic002G405500 Sobic006G080400--Sobic002G405500 Sobic001G063700 Sobic001G063700 Sobic006G080400--Sobic001G063700 Sobic002G154000 Sobic002G154000 Sobic006G080400--Sobic002G154000 Sobic004G355800 Sobic004G355800 Sobic006G080400--Sobic004G355800 Sobic006G040800 Sobic006G040800 Sobic006G080400--Sobic006G040800 Sobic003G360400 Sobic003G360400 Sobic006G080400--Sobic003G360400 Sobic010G273300 Sobic010G273300 Sobic010G205600--Sobic010G273300 Sobic010G205600--Sobic010G089800 Sobic002G308700 Sobic002G308700 Sobic010G205600--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic010G205600--Sobic005G162500 Sobic004G248600 Sobic004G248600 Sobic010G205600--Sobic004G248600 Sobic001G192000 Sobic001G192000 Sobic010G205600--Sobic001G192000 Sobic009G255700 Sobic009G255700 Sobic010G205600--Sobic009G255700 Sobic003G186000 Sobic003G186000 Sobic010G205600--Sobic003G186000 Sobic010G169600 Sobic010G169600 Sobic010G205600--Sobic010G169600 Sobic010G174700 Sobic010G174700 Sobic006G036100--Sobic010G174700 Sobic001G540800 Sobic001G540800 Sobic006G036100--Sobic001G540800 Sobic010G053600 Sobic010G053600 Sobic006G036100--Sobic010G053600 Sobic006G036100--Sobic001G004400 Sobic002G391600 Sobic002G391600 Sobic006G036100--Sobic002G391600 Sobic002G133300 Sobic002G133300 Sobic006G036100--Sobic002G133300 Sobic003G266001 Sobic003G266001 Sobic006G036100--Sobic003G266001 Sobic003G294600 Sobic003G294600 Sobic006G036100--Sobic003G294600 Sobic001G352900 Sobic001G352900 Sobic006G036100--Sobic001G352900 Sobic007G168300 Sobic007G168300 Sobic001G453000--Sobic007G168300 Sobic001G453000--Sobic003G294600 Sobic009G142000 Sobic009G142000 Sobic001G453000--Sobic009G142000 Sobic003G042400 Sobic003G042400 Sobic001G453000--Sobic003G042400 Sobic007G155500 Sobic007G155500 Sobic001G453000--Sobic007G155500 Sobic002G396500 Sobic002G396500 Sobic001G453000--Sobic002G396500 Sobic004G085000 Sobic004G085000 Sobic001G453000--Sobic004G085000 Sobic002G179400 Sobic002G179400 Sobic001G453000--Sobic002G179400 Sobic010G114900 Sobic010G114900 Sobic001G453000--Sobic010G114900 Sobic010G262100 Sobic010G262100 Sobic001G451300--Sobic010G262100 Sobic004G034700 Sobic004G034700 Sobic001G451300--Sobic004G034700 Sobic010G138900 Sobic010G138900 Sobic001G451300--Sobic010G138900 Sobic002G043100 Sobic002G043100 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic001G451300--Sobic010G174700 Sobic002G371600 Sobic002G371600 Sobic001G451300--Sobic002G371600 Sobic001G451300--Sobic009G142000 Sobic002G399800 Sobic002G399800 Sobic001G451300--Sobic002G399800 Sobic001G004400--Sobic002G133300 Sobic001G110600 Sobic001G110600 Sobic001G004400--Sobic001G110600 Sobic007G054800 Sobic007G054800 Sobic001G004400--Sobic007G054800 Sobic001G004400--Sobic004G248600 Sobic003G312100 Sobic003G312100 Sobic001G004400--Sobic003G312100 Sobic001G493700 Sobic001G493700 Sobic001G004400--Sobic001G493700 Sobic003G221400 Sobic003G221400 Sobic001G004400--Sobic003G221400 Sobic004G276400 Sobic004G276400 Sobic001G004400--Sobic004G276400 Sobic001G004400--Sobic002G179400 Sobic001G373000 Sobic001G373000 Sobic010G188000--Sobic001G373000 Sobic004G038100 Sobic004G038100 Sobic010G188000--Sobic004G038100 Sobic010G188000--Sobic002G371600 Sobic006G181800 Sobic006G181800 Sobic010G188000--Sobic006G181800 Sobic010G188000--Sobic001G451300 Sobic002G160700 Sobic002G160700 Sobic010G188000--Sobic002G160700 Sobic004G315500 Sobic004G315500 Sobic010G188000--Sobic004G315500 Sobic005G010900 Sobic005G010900 Sobic010G188000--Sobic005G010900 Sobic010G236600 Sobic010G236600 Sobic010G188000--Sobic010G236600 Sobic002G412700 Sobic002G412700 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic007G145400 Sobic007G145400 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic001G248100--Sobic010G262100 Sobic006G261400 Sobic006G261400 Sobic001G248100--Sobic006G261400 Sobic001G248100--Sobic002G160700 Sobic001G248100--Sobic004G155600 Sobic003G405500 Sobic003G405500 Sobic001G248100--Sobic003G405500 Sobic007G000300 Sobic007G000300 Sobic006G169500--Sobic007G000300 Sobic001G393900 Sobic001G393900 Sobic006G169500--Sobic001G393900 Sobic008G140700 Sobic008G140700 Sobic006G169500--Sobic008G140700 Sobic006G169500--Sobic001G248100 Sobic006G169500--Sobic010G089800 Sobic008G054600 Sobic008G054600 Sobic006G169500--Sobic008G054600 Sobic001G250700 Sobic001G250700 Sobic006G169500--Sobic001G250700 Sobic006G169500--Sobic001G453000 Sobic006G073200 Sobic006G073200 Sobic006G169500--Sobic006G073200
Octagon: transcription factors


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