Gene annotation
Transcriptome id Sobic.010G205600.1
Synonym
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A194YKF8
Pfam PF13191
Panther DB PTHR23155 PTHR23155:SF648
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g43670.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G273300 Leucine Rich Repeat family protein, expressed -
2 Sobic.010G089800 expressed protein -
3 Sobic.002G308700 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
4 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
5 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
6 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
7 Sobic.009G255700 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
8 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.010G169600 OsCML2 - Calmodulin-related calcium sensor protein, expressed -
10 Sobic.004G334300 ATMAK10, putative, expressed -
11 Sobic.010G121100 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.001G145000 expressed protein K14376: poly(A) polymerase
13 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3
14 Sobic.003G171400 HEAT repeat family protein, putative, expressed -
15 Sobic.001G004400 - K14290: XPO1, exportin-1
16 Sobic.001G255932 - -
17 Sobic.006G268600 SAR DNA-binding protein-like, putative, expressed -
18 Sobic.002G396500 FAT domain-containing protein, putative, expressed K08874: transformation/transcription domain-associated protein
19 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.003G170700 expressed protein -


Gene co-expression network
sample Sobic010G205600 Sobic010G205600 Sobic010G273300 Sobic010G273300 Sobic010G205600--Sobic010G273300 Sobic010G089800 Sobic010G089800 Sobic010G205600--Sobic010G089800 Sobic002G308700 Sobic002G308700 Sobic010G205600--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic010G205600--Sobic005G162500 Sobic004G248600 Sobic004G248600 Sobic010G205600--Sobic004G248600 Sobic001G192000 Sobic001G192000 Sobic010G205600--Sobic001G192000 Sobic009G255700 Sobic009G255700 Sobic010G205600--Sobic009G255700 Sobic003G186000 Sobic003G186000 Sobic010G205600--Sobic003G186000 Sobic010G169600 Sobic010G169600 Sobic010G205600--Sobic010G169600 Sobic008G044900 Sobic008G044900 Sobic010G273300--Sobic008G044900 Sobic008G021400 Sobic008G021400 Sobic010G273300--Sobic008G021400 Sobic010G273300--Sobic010G205600 Sobic001G475100 Sobic001G475100 Sobic010G273300--Sobic001G475100 Sobic007G188800 Sobic007G188800 Sobic010G273300--Sobic007G188800 Sobic001G340000 Sobic001G340000 Sobic010G273300--Sobic001G340000 Sobic010G121100 Sobic010G121100 Sobic010G273300--Sobic010G121100 Sobic005G061900 Sobic005G061900 Sobic010G273300--Sobic005G061900 Sobic005G188300 Sobic005G188300 Sobic010G273300--Sobic005G188300 Sobic006G080400 Sobic006G080400 Sobic010G089800--Sobic006G080400 Sobic010G089800--Sobic010G205600 Sobic006G036100 Sobic006G036100 Sobic010G089800--Sobic006G036100 Sobic001G453000 Sobic001G453000 Sobic010G089800--Sobic001G453000 Sobic001G451300 Sobic001G451300 Sobic010G089800--Sobic001G451300 Sobic001G004400 Sobic001G004400 Sobic010G089800--Sobic001G004400 Sobic010G188000 Sobic010G188000 Sobic010G089800--Sobic010G188000 Sobic001G248100 Sobic001G248100 Sobic010G089800--Sobic001G248100 Sobic006G169500 Sobic006G169500 Sobic010G089800--Sobic006G169500 Sobic002G308700--Sobic003G186000 Sobic004G276400 Sobic004G276400 Sobic002G308700--Sobic004G276400 Sobic002G308700--Sobic005G162500 Sobic010G105200 Sobic010G105200 Sobic002G308700--Sobic010G105200 Sobic004G334300 Sobic004G334300 Sobic002G308700--Sobic004G334300 Sobic002G133300 Sobic002G133300 Sobic002G308700--Sobic002G133300 Sobic001G457800 Sobic001G457800 Sobic002G308700--Sobic001G457800 Sobic001G151100 Sobic001G151100 Sobic002G308700--Sobic001G151100 Sobic002G316600 Sobic002G316600 Sobic002G308700--Sobic002G316600 Sobic001G493700 Sobic001G493700 Sobic005G162500--Sobic001G493700 Sobic002G429300 Sobic002G429300 Sobic005G162500--Sobic002G429300 Sobic001G370900 Sobic001G370900 Sobic005G162500--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic005G162500--Sobic009G131300 Sobic008G088872 Sobic008G088872 Sobic005G162500--Sobic008G088872 Sobic005G162500--Sobic003G186000 Sobic008G098900 Sobic008G098900 Sobic005G162500--Sobic008G098900 Sobic005G162500--Sobic004G276400 Sobic002G335600 Sobic002G335600 Sobic005G162500--Sobic002G335600 Sobic009G109200 Sobic009G109200 Sobic004G248600--Sobic009G109200 Sobic004G248600--Sobic001G004400 Sobic004G248600--Sobic002G133300 Sobic003G072200 Sobic003G072200 Sobic004G248600--Sobic003G072200 Sobic003G312100 Sobic003G312100 Sobic004G248600--Sobic003G312100 Sobic004G248600--Sobic003G186000 Sobic004G248600--Sobic004G276400 Sobic002G397500 Sobic002G397500 Sobic004G248600--Sobic002G397500 Sobic004G248600--Sobic005G162500 Sobic002G275700 Sobic002G275700 Sobic001G192000--Sobic002G275700 Sobic001G192000--Sobic009G255700 Sobic001G192000--Sobic005G162500 Sobic001G192000--Sobic008G088872 Sobic001G333100 Sobic001G333100 Sobic001G192000--Sobic001G333100 Sobic003G195000 Sobic003G195000 Sobic001G192000--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G192000--Sobic002G146300 Sobic001G192000--Sobic001G370900 Sobic003G221400 Sobic003G221400 Sobic001G192000--Sobic003G221400 Sobic009G255700--Sobic001G192000 Sobic009G255700--Sobic008G088872 Sobic009G255700--Sobic002G275700 Sobic009G255700--Sobic001G370900 Sobic009G255700--Sobic005G162500 Sobic006G184900 Sobic006G184900 Sobic009G255700--Sobic006G184900 Sobic009G255700--Sobic002G308700 Sobic009G255700--Sobic002G335600 Sobic004G244900 Sobic004G244900 Sobic009G255700--Sobic004G244900 Sobic003G186000--Sobic004G276400 Sobic003G186000--Sobic010G105200 Sobic010G010700 Sobic010G010700 Sobic003G186000--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic003G186000--Sobic005G001000 Sobic003G205200 Sobic003G205200 Sobic003G186000--Sobic003G205200 Sobic001G194200 Sobic001G194200 Sobic003G186000--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic003G186000--Sobic007G062800 Sobic008G001200 Sobic008G001200 Sobic003G186000--Sobic008G001200 Sobic007G103100 Sobic007G103100 Sobic003G186000--Sobic007G103100 Sobic010G169600--Sobic003G186000 Sobic010G169600--Sobic004G276400 Sobic010G169600--Sobic008G098900 Sobic010G169600--Sobic001G370900 Sobic010G169600--Sobic002G308700 Sobic008G085300 Sobic008G085300 Sobic010G169600--Sobic008G085300 Sobic010G169600--Sobic006G184900 Sobic004G223000 Sobic004G223000 Sobic010G169600--Sobic004G223000 Sobic010G169600--Sobic005G162500
Octagon: transcription factors


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