Gene annotation
Transcriptome id Sobic.001G255932.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7D0
Pfam -
Panther DB PTHR34561
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12012 : conserved peptide upstream open reading frame 20
RAP-DB (Rice) LOC_Os10g26145.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ96605
Barley HORVU0Hr1G001400.17 , HORVU0Hr1G001400.18
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
2 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
3 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
4 Sobic.008G088872 - -
5 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
6 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
7 Sobic.003G171400 HEAT repeat family protein, putative, expressed -
8 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
9 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2
10 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
11 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
12 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
13 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
14 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
15 Sobic.005G187300 lipin, N-terminal conserved region family protein, expressed K15728: phosphatidate phosphatase LPIN
16 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
17 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
18 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
19 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
20 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30


Gene co-expression network
sample Sobic001G255932 Sobic001G255932 Sobic001G192000 Sobic001G192000 Sobic001G255932--Sobic001G192000 Sobic001G255800 Sobic001G255800 Sobic001G255932--Sobic001G255800 Sobic001G333100 Sobic001G333100 Sobic001G255932--Sobic001G333100 Sobic008G088872 Sobic008G088872 Sobic001G255932--Sobic008G088872 Sobic008G085300 Sobic008G085300 Sobic001G255932--Sobic008G085300 Sobic006G041600 Sobic006G041600 Sobic001G255932--Sobic006G041600 Sobic003G171400 Sobic003G171400 Sobic001G255932--Sobic003G171400 Sobic005G162500 Sobic005G162500 Sobic001G255932--Sobic005G162500 Sobic010G080700 Sobic010G080700 Sobic001G255932--Sobic010G080700 Sobic002G275700 Sobic002G275700 Sobic001G192000--Sobic002G275700 Sobic009G255700 Sobic009G255700 Sobic001G192000--Sobic009G255700 Sobic001G192000--Sobic005G162500 Sobic001G192000--Sobic008G088872 Sobic001G192000--Sobic001G333100 Sobic003G195000 Sobic003G195000 Sobic001G192000--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G192000--Sobic002G146300 Sobic001G370900 Sobic001G370900 Sobic001G192000--Sobic001G370900 Sobic003G221400 Sobic003G221400 Sobic001G192000--Sobic003G221400 Sobic003G039000 Sobic003G039000 Sobic001G255800--Sobic003G039000 Sobic001G065100 Sobic001G065100 Sobic001G255800--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic001G255800--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic001G255800--Sobic002G401500 Sobic003G296900 Sobic003G296900 Sobic001G255800--Sobic003G296900 Sobic005G062200 Sobic005G062200 Sobic001G255800--Sobic005G062200 Sobic001G255800--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic001G255800--Sobic001G263600 Sobic001G255800--Sobic003G171400 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic001G333100--Sobic003G221400 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic008G088872--Sobic005G162500 Sobic008G088872--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic008G088872--Sobic009G131300 Sobic006G184900 Sobic006G184900 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic002G042600 Sobic002G042600 Sobic008G088872--Sobic002G042600 Sobic002G429300 Sobic002G429300 Sobic008G088872--Sobic002G429300 Sobic002G335600 Sobic002G335600 Sobic008G088872--Sobic002G335600 Sobic008G098900 Sobic008G098900 Sobic008G085300--Sobic008G098900 Sobic001G542500 Sobic001G542500 Sobic008G085300--Sobic001G542500 Sobic008G085300--Sobic005G162500 Sobic004G276400 Sobic004G276400 Sobic008G085300--Sobic004G276400 Sobic008G092600 Sobic008G092600 Sobic008G085300--Sobic008G092600 Sobic002G147600 Sobic002G147600 Sobic008G085300--Sobic002G147600 Sobic003G186000 Sobic003G186000 Sobic008G085300--Sobic003G186000 Sobic008G085300--Sobic001G370900 Sobic004G291900 Sobic004G291900 Sobic008G085300--Sobic004G291900 Sobic001G194200 Sobic001G194200 Sobic006G041600--Sobic001G194200 Sobic001G433800 Sobic001G433800 Sobic006G041600--Sobic001G433800 Sobic006G041600--Sobic004G291900 Sobic006G252900 Sobic006G252900 Sobic006G041600--Sobic006G252900 Sobic001G002000 Sobic001G002000 Sobic006G041600--Sobic001G002000 Sobic001G289800 Sobic001G289800 Sobic006G041600--Sobic001G289800 Sobic002G133300 Sobic002G133300 Sobic006G041600--Sobic002G133300 Sobic004G185800 Sobic004G185800 Sobic006G041600--Sobic004G185800 Sobic001G207000 Sobic001G207000 Sobic006G041600--Sobic001G207000 Sobic004G040500 Sobic004G040500 Sobic003G171400--Sobic004G040500 Sobic003G171400--Sobic003G221400 Sobic003G171400--Sobic002G147600 Sobic003G171400--Sobic001G255800 Sobic003G171400--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic003G171400--Sobic002G179400 Sobic001G493700 Sobic001G493700 Sobic003G171400--Sobic001G493700 Sobic003G171400--Sobic002G335600 Sobic003G171400--Sobic008G085300 Sobic005G162500--Sobic001G493700 Sobic005G162500--Sobic002G429300 Sobic005G162500--Sobic001G370900 Sobic005G162500--Sobic009G131300 Sobic005G162500--Sobic008G088872 Sobic005G162500--Sobic003G186000 Sobic005G162500--Sobic008G098900 Sobic005G162500--Sobic004G276400 Sobic005G162500--Sobic002G335600 Sobic003G375200 Sobic003G375200 Sobic010G080700--Sobic003G375200 Sobic010G080700--Sobic003G221400 Sobic010G080700--Sobic005G162500 Sobic010G080700--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic010G080700--Sobic010G059500 Sobic001G089600 Sobic001G089600 Sobic010G080700--Sobic001G089600 Sobic008G124800 Sobic008G124800 Sobic010G080700--Sobic008G124800 Sobic004G322400 Sobic004G322400 Sobic010G080700--Sobic004G322400 Sobic004G131300 Sobic004G131300 Sobic010G080700--Sobic004G131300
Octagon: transcription factors


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