Gene annotation
Transcriptome id Sobic.010G121100.2
Synonym Sb10g010680
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1W0VSJ9
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF556
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g17880.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCSU02G064100 , TraesCS7D02G035900 , TraesCS4A02G447700 , TraesCS4A02G449300 , TraesCS4A02G447300 , TraesCS7A02G039400 , TraesCS4A02G447200 , TraesCSU02G184200 , TraesCS4A02G448600 , TraesCS7A02G039500 , TraesCS7D02G035000 , TraesCSU02G102000 , TraesCS4A02G447200 , TraesCS4A02G447900 , TraesCS4A02G447900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475100 expressed protein -
2 Sobic.010G273300 Leucine Rich Repeat family protein, expressed -
3 Sobic.005G145550 - -
4 Sobic.010G205600 Leucine Rich Repeat family protein, expressed -
5 Sobic.007G185300 - -
6 Sobic.008G021400 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
7 Sobic.007G163001 - -
8 Sobic.005G102900 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.002G424700 ATPOT1, putative, expressed -
10 Sobic.007G188800 "Candidate orthologue to the wheat Pm40 gene, Disease resistance RGA1"(PubMedID : 27755575)@CC-NBS-LRR, putative, expressed -
11 Sobic.005G189300 - -
12 Sobic.008G044900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -
13 Sobic.001G219700 pentatricopeptide, putative, expressed -
14 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.005G133600 - -
16 Sobic.003G179350 - -
17 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
18 Sobic.003G186900 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
19 Sobic.010G043100 serine esterase family protein, putative, expressed -
20 Sobic.003G207500 signal peptide peptidase domain containing protein, expressed -


Gene co-expression network
sample Sobic010G121100 Sobic010G121100 Sobic001G475100 Sobic001G475100 Sobic010G121100--Sobic001G475100 Sobic010G273300 Sobic010G273300 Sobic010G121100--Sobic010G273300 Sobic005G145550 Sobic005G145550 Sobic010G121100--Sobic005G145550 Sobic010G205600 Sobic010G205600 Sobic010G121100--Sobic010G205600 Sobic007G185300 Sobic007G185300 Sobic010G121100--Sobic007G185300 Sobic008G021400 Sobic008G021400 Sobic010G121100--Sobic008G021400 Sobic007G163001 Sobic007G163001 Sobic010G121100--Sobic007G163001 Sobic005G102900 Sobic005G102900 Sobic010G121100--Sobic005G102900 Sobic002G424700 Sobic002G424700 Sobic010G121100--Sobic002G424700 Sobic001G475100--Sobic005G145550 Sobic005G188300 Sobic005G188300 Sobic001G475100--Sobic005G188300 Sobic001G475100--Sobic007G163001 Sobic006G057600 Sobic006G057600 Sobic001G475100--Sobic006G057600 Sobic003G207500 Sobic003G207500 Sobic001G475100--Sobic003G207500 Sobic001G475100--Sobic010G273300 Sobic001G475100--Sobic010G121100 Sobic007G188800 Sobic007G188800 Sobic001G475100--Sobic007G188800 Sobic008G111200 Sobic008G111200 Sobic001G475100--Sobic008G111200 Sobic008G044900 Sobic008G044900 Sobic010G273300--Sobic008G044900 Sobic010G273300--Sobic008G021400 Sobic010G273300--Sobic010G205600 Sobic010G273300--Sobic001G475100 Sobic010G273300--Sobic007G188800 Sobic001G340000 Sobic001G340000 Sobic010G273300--Sobic001G340000 Sobic010G273300--Sobic010G121100 Sobic005G061900 Sobic005G061900 Sobic010G273300--Sobic005G061900 Sobic010G273300--Sobic005G188300 Sobic005G189300 Sobic005G189300 Sobic005G145550--Sobic005G189300 Sobic005G145550--Sobic007G163001 Sobic004G324700 Sobic004G324700 Sobic005G145550--Sobic004G324700 Sobic005G145550--Sobic001G475100 Sobic005G145550--Sobic003G207500 Sobic002G031900 Sobic002G031900 Sobic005G145550--Sobic002G031900 Sobic005G145550--Sobic007G188800 Sobic003G179350 Sobic003G179350 Sobic005G145550--Sobic003G179350 Sobic004G111300 Sobic004G111300 Sobic005G145550--Sobic004G111300 Sobic010G205600--Sobic010G273300 Sobic010G089800 Sobic010G089800 Sobic010G205600--Sobic010G089800 Sobic002G308700 Sobic002G308700 Sobic010G205600--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic010G205600--Sobic005G162500 Sobic004G248600 Sobic004G248600 Sobic010G205600--Sobic004G248600 Sobic001G192000 Sobic001G192000 Sobic010G205600--Sobic001G192000 Sobic009G255700 Sobic009G255700 Sobic010G205600--Sobic009G255700 Sobic003G186000 Sobic003G186000 Sobic010G205600--Sobic003G186000 Sobic010G169600 Sobic010G169600 Sobic010G205600--Sobic010G169600 Sobic007G185300--Sobic003G179350 Sobic002G173100 Sobic002G173100 Sobic007G185300--Sobic002G173100 Sobic003G190100 Sobic003G190100 Sobic007G185300--Sobic003G190100 Sobic003G306600 Sobic003G306600 Sobic007G185300--Sobic003G306600 Sobic002G244200 Sobic002G244200 Sobic007G185300--Sobic002G244200 Sobic008G081900 Sobic008G081900 Sobic007G185300--Sobic008G081900 Sobic007G090403 Sobic007G090403 Sobic007G185300--Sobic007G090403 Sobic005G133600 Sobic005G133600 Sobic007G185300--Sobic005G133600 Sobic007G185300--Sobic002G424700 Sobic008G021400--Sobic010G273300 Sobic001G292900 Sobic001G292900 Sobic008G021400--Sobic001G292900 Sobic008G021400--Sobic001G340000 Sobic008G021400--Sobic008G044900 Sobic008G021400--Sobic002G031900 Sobic008G021400--Sobic010G121100 Sobic009G217400 Sobic009G217400 Sobic008G021400--Sobic009G217400 Sobic008G021400--Sobic005G145550 Sobic001G475200 Sobic001G475200 Sobic008G021400--Sobic001G475200 Sobic007G163001--Sobic003G207500 Sobic007G163001--Sobic005G145550 Sobic003G251100 Sobic003G251100 Sobic007G163001--Sobic003G251100 Sobic007G163001--Sobic007G188800 Sobic007G163001--Sobic004G324700 Sobic010G214500 Sobic010G214500 Sobic007G163001--Sobic010G214500 Sobic007G163001--Sobic001G475100 Sobic007G163001--Sobic008G111200 Sobic007G163001--Sobic002G031900 Sobic005G102900--Sobic003G207500 Sobic005G102900--Sobic005G133600 Sobic005G102900--Sobic007G188800 Sobic004G057500 Sobic004G057500 Sobic005G102900--Sobic004G057500 Sobic005G102900--Sobic007G185300 Sobic005G102900--Sobic001G475100 Sobic005G102900--Sobic010G121100 Sobic005G102900--Sobic010G205600 Sobic005G102900--Sobic010G273300 Sobic001G145000 Sobic001G145000 Sobic002G424700--Sobic001G145000 Sobic004G334300 Sobic004G334300 Sobic002G424700--Sobic004G334300 Sobic004G244900 Sobic004G244900 Sobic002G424700--Sobic004G244900 Sobic001G519900 Sobic001G519900 Sobic002G424700--Sobic001G519900 Sobic007G103100 Sobic007G103100 Sobic002G424700--Sobic007G103100 Sobic002G424700--Sobic007G185300 Sobic002G275700 Sobic002G275700 Sobic002G424700--Sobic002G275700 Sobic005G072100 Sobic005G072100 Sobic002G424700--Sobic005G072100 Sobic002G424700--Sobic007G090403
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.