Gene annotation
Transcriptome id Sobic.005G102900.1
Synonym
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt C5Y1W7
Pfam PF00560 PF00069 PF00931
Panther DB PTHR23155 PTHR23155:SF557
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g10550.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G207500 signal peptide peptidase domain containing protein, expressed -
2 Sobic.005G133600 - -
3 Sobic.007G188800 "Candidate orthologue to the wheat Pm40 gene, Disease resistance RGA1"(PubMedID : 27755575)@CC-NBS-LRR, putative, expressed -
4 Sobic.004G057500 OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.007G185300 - -
6 Sobic.001G475100 expressed protein -
7 Sobic.010G121100 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.010G205600 Leucine Rich Repeat family protein, expressed -
9 Sobic.010G273300 Leucine Rich Repeat family protein, expressed -
10 Sobic.003G251100 - -
11 Sobic.006G268600 SAR DNA-binding protein-like, putative, expressed -
12 Sobic.002G424700 ATPOT1, putative, expressed -
13 Sobic.001G519900 ribonuclease protein, putative, expressed K12585: DIS3, exosome complex exonuclease DIS3/RRP44
14 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
15 Sobic.001G252000 uridylyltransferase-related, putative, expressed -
16 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
17 Sobic.002G147600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
18 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
19 Sobic.004G092900 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
20 Sobic.002G249300 auxin efflux carrier component, putative, expressed -


Gene co-expression network
sample Sobic005G102900 Sobic005G102900 Sobic003G207500 Sobic003G207500 Sobic005G102900--Sobic003G207500 Sobic005G133600 Sobic005G133600 Sobic005G102900--Sobic005G133600 Sobic007G188800 Sobic007G188800 Sobic005G102900--Sobic007G188800 Sobic004G057500 Sobic004G057500 Sobic005G102900--Sobic004G057500 Sobic007G185300 Sobic007G185300 Sobic005G102900--Sobic007G185300 Sobic001G475100 Sobic001G475100 Sobic005G102900--Sobic001G475100 Sobic010G121100 Sobic010G121100 Sobic005G102900--Sobic010G121100 Sobic010G205600 Sobic010G205600 Sobic005G102900--Sobic010G205600 Sobic010G273300 Sobic010G273300 Sobic005G102900--Sobic010G273300 Sobic007G163001 Sobic007G163001 Sobic003G207500--Sobic007G163001 Sobic004G111300 Sobic004G111300 Sobic003G207500--Sobic004G111300 Sobic005G145550 Sobic005G145550 Sobic003G207500--Sobic005G145550 Sobic003G207500--Sobic007G188800 Sobic003G251100 Sobic003G251100 Sobic003G207500--Sobic003G251100 Sobic003G207500--Sobic001G475100 Sobic008G111200 Sobic008G111200 Sobic003G207500--Sobic008G111200 Sobic003G207500--Sobic005G102900 Sobic004G324700 Sobic004G324700 Sobic003G207500--Sobic004G324700 Sobic001G223550 Sobic001G223550 Sobic005G133600--Sobic001G223550 Sobic009G248801 Sobic009G248801 Sobic005G133600--Sobic009G248801 Sobic008G101100 Sobic008G101100 Sobic005G133600--Sobic008G101100 Sobic004G253700 Sobic004G253700 Sobic005G133600--Sobic004G253700 Sobic003G160100 Sobic003G160100 Sobic005G133600--Sobic003G160100 Sobic005G133600--Sobic007G185300 Sobic007G090403 Sobic007G090403 Sobic005G133600--Sobic007G090403 Sobic007G010700 Sobic007G010700 Sobic005G133600--Sobic007G010700 Sobic005G095000 Sobic005G095000 Sobic005G133600--Sobic005G095000 Sobic007G188800--Sobic007G163001 Sobic007G188800--Sobic003G207500 Sobic007G188800--Sobic005G145550 Sobic007G188800--Sobic003G251100 Sobic007G188800--Sobic010G273300 Sobic007G188800--Sobic001G475100 Sobic007G188800--Sobic005G102900 Sobic010G214500 Sobic010G214500 Sobic007G188800--Sobic010G214500 Sobic005G189300 Sobic005G189300 Sobic007G188800--Sobic005G189300 Sobic004G057500--Sobic005G102900 Sobic004G057500--Sobic005G133600 Sobic010G227800 Sobic010G227800 Sobic004G057500--Sobic010G227800 Sobic001G519900 Sobic001G519900 Sobic004G057500--Sobic001G519900 Sobic001G279601 Sobic001G279601 Sobic004G057500--Sobic001G279601 Sobic003G174301 Sobic003G174301 Sobic004G057500--Sobic003G174301 Sobic005G053200 Sobic005G053200 Sobic004G057500--Sobic005G053200 Sobic002G128200 Sobic002G128200 Sobic004G057500--Sobic002G128200 Sobic005G149700 Sobic005G149700 Sobic004G057500--Sobic005G149700 Sobic003G179350 Sobic003G179350 Sobic007G185300--Sobic003G179350 Sobic002G173100 Sobic002G173100 Sobic007G185300--Sobic002G173100 Sobic003G190100 Sobic003G190100 Sobic007G185300--Sobic003G190100 Sobic003G306600 Sobic003G306600 Sobic007G185300--Sobic003G306600 Sobic002G244200 Sobic002G244200 Sobic007G185300--Sobic002G244200 Sobic008G081900 Sobic008G081900 Sobic007G185300--Sobic008G081900 Sobic007G185300--Sobic007G090403 Sobic007G185300--Sobic005G133600 Sobic002G424700 Sobic002G424700 Sobic007G185300--Sobic002G424700 Sobic001G475100--Sobic005G145550 Sobic005G188300 Sobic005G188300 Sobic001G475100--Sobic005G188300 Sobic001G475100--Sobic007G163001 Sobic006G057600 Sobic006G057600 Sobic001G475100--Sobic006G057600 Sobic001G475100--Sobic003G207500 Sobic001G475100--Sobic010G273300 Sobic001G475100--Sobic010G121100 Sobic001G475100--Sobic007G188800 Sobic001G475100--Sobic008G111200 Sobic010G121100--Sobic001G475100 Sobic010G121100--Sobic010G273300 Sobic010G121100--Sobic005G145550 Sobic010G121100--Sobic010G205600 Sobic010G121100--Sobic007G185300 Sobic008G021400 Sobic008G021400 Sobic010G121100--Sobic008G021400 Sobic010G121100--Sobic007G163001 Sobic010G121100--Sobic005G102900 Sobic010G121100--Sobic002G424700 Sobic010G205600--Sobic010G273300 Sobic010G089800 Sobic010G089800 Sobic010G205600--Sobic010G089800 Sobic002G308700 Sobic002G308700 Sobic010G205600--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic010G205600--Sobic005G162500 Sobic004G248600 Sobic004G248600 Sobic010G205600--Sobic004G248600 Sobic001G192000 Sobic001G192000 Sobic010G205600--Sobic001G192000 Sobic009G255700 Sobic009G255700 Sobic010G205600--Sobic009G255700 Sobic003G186000 Sobic003G186000 Sobic010G205600--Sobic003G186000 Sobic010G169600 Sobic010G169600 Sobic010G205600--Sobic010G169600 Sobic008G044900 Sobic008G044900 Sobic010G273300--Sobic008G044900 Sobic010G273300--Sobic008G021400 Sobic010G273300--Sobic010G205600 Sobic010G273300--Sobic001G475100 Sobic010G273300--Sobic007G188800 Sobic001G340000 Sobic001G340000 Sobic010G273300--Sobic001G340000 Sobic010G273300--Sobic010G121100 Sobic005G061900 Sobic005G061900 Sobic010G273300--Sobic005G061900 Sobic010G273300--Sobic005G188300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.