Gene annotation
Transcriptome id Sobic.007G016800.2
Synonym Sb07g001460
Functional annotation OsFBL26 - F-box domain and LRR containing protein, expressed
UniProt A0A1Z5R881
Pfam -
Panther DB PTHR32212 PTHR32212:SF86
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61330 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os05g49980.1 : OsFBL26 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6A02G046000 , TraesCSU02G107500 , TraesCS6D02G053200 , TraesCS6B02G065100 , TraesCS6B02G062100 , TraesCS4B02G060700 , TraesCS6A02G048500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G080550 - -
2 Sobic.010G068800 glutamate receptor 2.6 precursor, putative, expressed -
3 Sobic.010G186100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.006G216200 expressed protein -
5 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
6 Sobic.005G126600 OsFBL55 - F-box domain and LRR containing protein, expressed -
7 Sobic.009G002800 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
8 Sobic.004G321200 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
9 Sobic.002G060700 OsFBX237 - F-box domain containing protein, expressed -
10 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
11 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
12 Sobic.005G132600 expressed protein -
13 Sobic.003G043000 expressed protein -
14 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
15 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
16 Sobic.009G098300 - -
17 Sobic.001G014300 OsFBDUF15 - F-box and DUF domain containing protein, expressed -
18 Sobic.003G016900 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
19 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
20 Sobic.001G440800 myb/SANT domain protein, putative, expressed -


Gene co-expression network
sample Sobic007G016800 Sobic007G016800 Sobic010G080550 Sobic010G080550 Sobic007G016800--Sobic010G080550 Sobic010G068800 Sobic010G068800 Sobic007G016800--Sobic010G068800 Sobic010G186100 Sobic010G186100 Sobic007G016800--Sobic010G186100 Sobic006G216200 Sobic006G216200 Sobic007G016800--Sobic006G216200 Sobic004G320700 Sobic004G320700 Sobic007G016800--Sobic004G320700 Sobic005G126600 Sobic005G126600 Sobic007G016800--Sobic005G126600 Sobic009G002800 Sobic009G002800 Sobic007G016800--Sobic009G002800 Sobic004G321200 Sobic004G321200 Sobic007G016800--Sobic004G321200 Sobic002G060700 Sobic002G060700 Sobic007G016800--Sobic002G060700 Sobic009G098300 Sobic009G098300 Sobic010G080550--Sobic009G098300 Sobic002G127200 Sobic002G127200 Sobic010G080550--Sobic002G127200 Sobic001G014300 Sobic001G014300 Sobic010G080550--Sobic001G014300 Sobic005G108000 Sobic005G108000 Sobic010G080550--Sobic005G108000 Sobic004G149700 Sobic004G149700 Sobic010G080550--Sobic004G149700 Sobic010G080550--Sobic006G216200 Sobic004G223300 Sobic004G223300 Sobic010G080550--Sobic004G223300 Sobic001G245000 Sobic001G245000 Sobic010G080550--Sobic001G245000 Sobic006G154100 Sobic006G154100 Sobic010G080550--Sobic006G154100 Sobic010G068800--Sobic006G216200 Sobic010G068800--Sobic007G016800 Sobic010G068800--Sobic010G080550 Sobic003G314300 Sobic003G314300 Sobic010G068800--Sobic003G314300 Sobic001G034000 Sobic001G034000 Sobic010G068800--Sobic001G034000 Sobic010G254900 Sobic010G254900 Sobic010G068800--Sobic010G254900 Sobic003G193500 Sobic003G193500 Sobic010G068800--Sobic003G193500 Sobic010G264000 Sobic010G264000 Sobic010G068800--Sobic010G264000 Sobic009G128500 Sobic009G128500 Sobic010G068800--Sobic009G128500 Sobic010G186100--Sobic004G320700 Sobic010G244900 Sobic010G244900 Sobic010G186100--Sobic010G244900 Sobic002G031900 Sobic002G031900 Sobic010G186100--Sobic002G031900 Sobic006G032300 Sobic006G032300 Sobic010G186100--Sobic006G032300 Sobic001G237600 Sobic001G237600 Sobic010G186100--Sobic001G237600 Sobic002G292900 Sobic002G292900 Sobic010G186100--Sobic002G292900 Sobic010G071100 Sobic010G071100 Sobic010G186100--Sobic010G071100 Sobic004G209700 Sobic004G209700 Sobic010G186100--Sobic004G209700 Sobic003G329900 Sobic003G329900 Sobic010G186100--Sobic003G329900 Sobic010G033600 Sobic010G033600 Sobic006G216200--Sobic010G033600 Sobic006G281700 Sobic006G281700 Sobic006G216200--Sobic006G281700 Sobic006G216200--Sobic001G014300 Sobic006G216200--Sobic010G080550 Sobic006G216200--Sobic009G128500 Sobic004G096400 Sobic004G096400 Sobic006G216200--Sobic004G096400 Sobic006G216200--Sobic010G254900 Sobic006G216200--Sobic004G223300 Sobic002G241600 Sobic002G241600 Sobic006G216200--Sobic002G241600 Sobic004G320700--Sobic002G292900 Sobic004G320700--Sobic001G237600 Sobic002G079000 Sobic002G079000 Sobic004G320700--Sobic002G079000 Sobic004G320700--Sobic010G186100 Sobic004G320700--Sobic010G244900 Sobic006G210700 Sobic006G210700 Sobic004G320700--Sobic006G210700 Sobic007G087000 Sobic007G087000 Sobic004G320700--Sobic007G087000 Sobic004G320700--Sobic006G032300 Sobic009G228000 Sobic009G228000 Sobic004G320700--Sobic009G228000 Sobic010G278200 Sobic010G278200 Sobic005G126600--Sobic010G278200 Sobic003G316500 Sobic003G316500 Sobic005G126600--Sobic003G316500 Sobic002G045600 Sobic002G045600 Sobic005G126600--Sobic002G045600 Sobic010G147100 Sobic010G147100 Sobic005G126600--Sobic010G147100 Sobic001G050200 Sobic001G050200 Sobic005G126600--Sobic001G050200 Sobic005G100700 Sobic005G100700 Sobic005G126600--Sobic005G100700 Sobic003G372500 Sobic003G372500 Sobic005G126600--Sobic003G372500 Sobic003G221900 Sobic003G221900 Sobic005G126600--Sobic003G221900 Sobic004G200200 Sobic004G200200 Sobic005G126600--Sobic004G200200 Sobic009G002800--Sobic009G228000 Sobic004G240400 Sobic004G240400 Sobic009G002800--Sobic004G240400 Sobic006G039400 Sobic006G039400 Sobic009G002800--Sobic006G039400 Sobic005G138300 Sobic005G138300 Sobic009G002800--Sobic005G138300 Sobic010G068700 Sobic010G068700 Sobic009G002800--Sobic010G068700 Sobic006G174850 Sobic006G174850 Sobic009G002800--Sobic006G174850 Sobic008G083200 Sobic008G083200 Sobic009G002800--Sobic008G083200 Sobic009G124700 Sobic009G124700 Sobic009G002800--Sobic009G124700 Sobic009G002800--Sobic007G087000 Sobic009G042600 Sobic009G042600 Sobic004G321200--Sobic009G042600 Sobic006G141300 Sobic006G141300 Sobic004G321200--Sobic006G141300 Sobic007G081900 Sobic007G081900 Sobic004G321200--Sobic007G081900 Sobic004G321200--Sobic007G016800 Sobic003G284700 Sobic003G284700 Sobic004G321200--Sobic003G284700 Sobic007G056900 Sobic007G056900 Sobic004G321200--Sobic007G056900 Sobic002G245000 Sobic002G245000 Sobic004G321200--Sobic002G245000 Sobic006G215800 Sobic006G215800 Sobic004G321200--Sobic006G215800 Sobic004G218000 Sobic004G218000 Sobic004G321200--Sobic004G218000 Sobic002G060700--Sobic002G241600 Sobic002G060700--Sobic001G014300 Sobic003G043000 Sobic003G043000 Sobic002G060700--Sobic003G043000 Sobic002G060600 Sobic002G060600 Sobic002G060700--Sobic002G060600 Sobic005G163100 Sobic005G163100 Sobic002G060700--Sobic005G163100 Sobic009G260650 Sobic009G260650 Sobic002G060700--Sobic009G260650 Sobic002G060700--Sobic009G228000 Sobic002G386600 Sobic002G386600 Sobic002G060700--Sobic002G386600 Sobic002G227500 Sobic002G227500 Sobic002G060700--Sobic002G227500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.