Gene annotation
Transcriptome id Sobic.004G321200.1
Synonym Sb04g035150
Functional annotation tRNA synthetase class I, putative, expressed
UniProt A0A194YSR9
Pfam PF08264 PF00133
Panther DB PTHR11946 PTHR11946:SF73
NCBI CDD -
KEGG Orthology K01870; IARS, isoleucyl-tRNA synthetase
Gene Ontology GO:0006418; tRNA aminoacylation for protein translation GO:0000166nucleotide binding GO:0005524ATP binding GO:0004812aminoacyl-tRNA ligase activity


Orthologs (automatic annotation)
TAIR AT4G10320 : tRNA synthetase class I (I, L, M and V) family protein
RAP-DB (Rice) LOC_Os06g43760.1 : tRNA synthetase class I, putative, expressed
MaizeGDB (Corn) Zm00025a042065 , Zm00025a051375
Brachypodium KQK16788
Barley HORVU7Hr1G115280.6 , HORVU7Hr1G115280.5 , HORVU7Hr1G115280.8 , HORVU7Hr1G115280.9 , HORVU7Hr1G115280.10 , HORVU7Hr1G115280.11 , HORVU7Hr1G115280.12 , HORVU7Hr1G115280.13 , HORVU7Hr1G115280.14 , HORVU7Hr1G115280.15 , HORVU7Hr1G115280.16 , HORVU7Hr1G115280.17 , HORVU7Hr1G115280.18 , HORVU7Hr1G115280.19 , HORVU7Hr1G115280.20 , HORVU7Hr1G115280.2 , HORVU7Hr1G115280.3 , HORVU7Hr1G115280.1 , HORVU7Hr1G115280.7 , HORVU7Hr1G115280.4
Wheat TraesCS7B02G432400 , TraesCS7B02G432400 , TraesCS7A02G516000 , TraesCS7A02G516000 , TraesCS7A02G516000 , TraesCS7D02G506300 , TraesCS7D02G506300 , TraesCS7D02G506300 , TraesCS7D02G506300 , TraesCS5A02G467900
Populus -


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cDNA sequences
Sobic.004G321200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G042600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.006G141300 sensitivity to red light reduced protein 1, putative, expressed -
3 Sobic.007G081900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
4 Sobic.007G016800 OsFBL26 - F-box domain and LRR containing protein, expressed -
5 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.007G056900 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
7 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
8 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
9 Sobic.004G218000 SET domain containing protein, expressed -
10 Sobic.010G186100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
12 Sobic.002G400300 expressed protein -
13 Sobic.001G524000 CBS domain containing protein, expressed K16302: metal transporter CNNM
14 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
15 Sobic.003G395700 bromodomain containing protein, expressed -
16 Sobic.002G060400 OsFBX237 - F-box domain containing protein, expressed -
17 Sobic.003G331100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
19 Sobic.006G015500 ZOS9-03 - C2H2 zinc finger protein, expressed -
20 Sobic.010G235700 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic004G321200 Sobic004G321200 Sobic009G042600 Sobic009G042600 Sobic004G321200--Sobic009G042600 Sobic006G141300 Sobic006G141300 Sobic004G321200--Sobic006G141300 Sobic007G081900 Sobic007G081900 Sobic004G321200--Sobic007G081900 Sobic007G016800 Sobic007G016800 Sobic004G321200--Sobic007G016800 Sobic003G284700 Sobic003G284700 Sobic004G321200--Sobic003G284700 Sobic007G056900 Sobic007G056900 Sobic004G321200--Sobic007G056900 Sobic002G245000 Sobic002G245000 Sobic004G321200--Sobic002G245000 Sobic006G215800 Sobic006G215800 Sobic004G321200--Sobic006G215800 Sobic004G218000 Sobic004G218000 Sobic004G321200--Sobic004G218000 Sobic001G137400 Sobic001G137400 Sobic009G042600--Sobic001G137400 Sobic009G042600--Sobic004G218000 Sobic001G457600 Sobic001G457600 Sobic009G042600--Sobic001G457600 Sobic007G193300 Sobic007G193300 Sobic009G042600--Sobic007G193300 Sobic003G022900 Sobic003G022900 Sobic009G042600--Sobic003G022900 Sobic002G061800 Sobic002G061800 Sobic009G042600--Sobic002G061800 Sobic005G164800 Sobic005G164800 Sobic009G042600--Sobic005G164800 Sobic006G097300 Sobic006G097300 Sobic009G042600--Sobic006G097300 Sobic003G217300 Sobic003G217300 Sobic009G042600--Sobic003G217300 Sobic001G524000 Sobic001G524000 Sobic006G141300--Sobic001G524000 Sobic006G141300--Sobic004G321200 Sobic002G234200 Sobic002G234200 Sobic006G141300--Sobic002G234200 Sobic002G060400 Sobic002G060400 Sobic006G141300--Sobic002G060400 Sobic002G406300 Sobic002G406300 Sobic006G141300--Sobic002G406300 Sobic008G013200 Sobic008G013200 Sobic006G141300--Sobic008G013200 Sobic002G165700 Sobic002G165700 Sobic006G141300--Sobic002G165700 Sobic006G210700 Sobic006G210700 Sobic006G141300--Sobic006G210700 Sobic004G320700 Sobic004G320700 Sobic006G141300--Sobic004G320700 Sobic003G006200 Sobic003G006200 Sobic007G081900--Sobic003G006200 Sobic002G267400 Sobic002G267400 Sobic007G081900--Sobic002G267400 Sobic010G235700 Sobic010G235700 Sobic007G081900--Sobic010G235700 Sobic004G207100 Sobic004G207100 Sobic007G081900--Sobic004G207100 Sobic004G320100 Sobic004G320100 Sobic007G081900--Sobic004G320100 Sobic002G374200 Sobic002G374200 Sobic007G081900--Sobic002G374200 Sobic003G004600 Sobic003G004600 Sobic007G081900--Sobic003G004600 Sobic010G154000 Sobic010G154000 Sobic007G081900--Sobic010G154000 Sobic008G160500 Sobic008G160500 Sobic007G081900--Sobic008G160500 Sobic010G080550 Sobic010G080550 Sobic007G016800--Sobic010G080550 Sobic010G068800 Sobic010G068800 Sobic007G016800--Sobic010G068800 Sobic010G186100 Sobic010G186100 Sobic007G016800--Sobic010G186100 Sobic006G216200 Sobic006G216200 Sobic007G016800--Sobic006G216200 Sobic007G016800--Sobic004G320700 Sobic005G126600 Sobic005G126600 Sobic007G016800--Sobic005G126600 Sobic009G002800 Sobic009G002800 Sobic007G016800--Sobic009G002800 Sobic007G016800--Sobic004G321200 Sobic002G060700 Sobic002G060700 Sobic007G016800--Sobic002G060700 Sobic001G278700 Sobic001G278700 Sobic003G284700--Sobic001G278700 Sobic003G055200 Sobic003G055200 Sobic003G284700--Sobic003G055200 Sobic003G284700--Sobic006G210700 Sobic010G273800 Sobic010G273800 Sobic003G284700--Sobic010G273800 Sobic006G257600 Sobic006G257600 Sobic003G284700--Sobic006G257600 Sobic004G160700 Sobic004G160700 Sobic003G284700--Sobic004G160700 Sobic002G354800 Sobic002G354800 Sobic003G284700--Sobic002G354800 Sobic002G104300 Sobic002G104300 Sobic003G284700--Sobic002G104300 Sobic004G340566 Sobic004G340566 Sobic003G284700--Sobic004G340566 Sobic007G056900--Sobic004G218000 Sobic007G056900--Sobic005G164800 Sobic007G056900--Sobic003G217300 Sobic007G056900--Sobic002G061800 Sobic006G143300 Sobic006G143300 Sobic007G056900--Sobic006G143300 Sobic005G041900 Sobic005G041900 Sobic007G056900--Sobic005G041900 Sobic001G132200 Sobic001G132200 Sobic007G056900--Sobic001G132200 Sobic007G056900--Sobic009G042600 Sobic006G062600 Sobic006G062600 Sobic007G056900--Sobic006G062600 Sobic003G212900 Sobic003G212900 Sobic002G245000--Sobic003G212900 Sobic007G000200 Sobic007G000200 Sobic002G245000--Sobic007G000200 Sobic002G029100 Sobic002G029100 Sobic002G245000--Sobic002G029100 Sobic001G542450 Sobic001G542450 Sobic002G245000--Sobic001G542450 Sobic001G135500 Sobic001G135500 Sobic002G245000--Sobic001G135500 Sobic003G062300 Sobic003G062300 Sobic002G245000--Sobic003G062300 Sobic008G002300 Sobic008G002300 Sobic002G245000--Sobic008G002300 Sobic009G020500 Sobic009G020500 Sobic002G245000--Sobic009G020500 Sobic006G032300 Sobic006G032300 Sobic002G245000--Sobic006G032300 Sobic003G090000 Sobic003G090000 Sobic006G215800--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic006G215800--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic006G215800--Sobic001G218600 Sobic004G313400 Sobic004G313400 Sobic006G215800--Sobic004G313400 Sobic003G396500 Sobic003G396500 Sobic006G215800--Sobic003G396500 Sobic002G299200 Sobic002G299200 Sobic006G215800--Sobic002G299200 Sobic008G098700 Sobic008G098700 Sobic006G215800--Sobic008G098700 Sobic007G060100 Sobic007G060100 Sobic006G215800--Sobic007G060100 Sobic005G070301 Sobic005G070301 Sobic006G215800--Sobic005G070301 Sobic004G218000--Sobic003G217300 Sobic004G218000--Sobic007G056900 Sobic004G218000--Sobic005G164800 Sobic002G349000 Sobic002G349000 Sobic004G218000--Sobic002G349000 Sobic002G221100 Sobic002G221100 Sobic004G218000--Sobic002G221100 Sobic004G218000--Sobic005G041900 Sobic004G218000--Sobic003G022900 Sobic004G218000--Sobic009G042600 Sobic010G180200 Sobic010G180200 Sobic004G218000--Sobic010G180200
Octagon: transcription factors


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