Gene annotation
Transcriptome id Sobic.003G395700.1
Synonym
Functional annotation bromodomain containing protein, expressed
UniProt A0A1B6Q7T0
Pfam PF17035
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27420 : -
RAP-DB (Rice) LOC_Os01g11580.1 : bromodomain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G321200 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
2 Sobic.010G240800 REV1, putative, expressed K03515: DNA repair protein REV1
3 Sobic.002G154400 MIM, putative, expressed -
4 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
5 Sobic.006G257600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
6 Sobic.007G004000 YL1 nuclear protein C-terminal domain containing protein, expressed K11664: VPS72, TCFL1, vacuolar protein sorting-associated protein 72
7 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
8 Sobic.005G114101 - -
9 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
10 Sobic.004G063300 expressed protein -
11 Sobic.007G056900 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
12 Sobic.003G272700 transmembrane protein 16K, putative, expressed -
13 Sobic.007G164200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -
14 Sobic.004G172500 expressed protein -
15 Sobic.009G042600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G004600 expressed protein -
17 Sobic.004G218000 SET domain containing protein, expressed -
18 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
19 Sobic.009G069200 glycine-rich protein, putative, expressed -
20 Sobic.002G106000 OsFBD15 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic003G395700 Sobic003G395700 Sobic004G321200 Sobic004G321200 Sobic003G395700--Sobic004G321200 Sobic010G240800 Sobic010G240800 Sobic003G395700--Sobic010G240800 Sobic002G154400 Sobic002G154400 Sobic003G395700--Sobic002G154400 Sobic003G284700 Sobic003G284700 Sobic003G395700--Sobic003G284700 Sobic006G257600 Sobic006G257600 Sobic003G395700--Sobic006G257600 Sobic007G004000 Sobic007G004000 Sobic003G395700--Sobic007G004000 Sobic002G315100 Sobic002G315100 Sobic003G395700--Sobic002G315100 Sobic005G114101 Sobic005G114101 Sobic003G395700--Sobic005G114101 Sobic005G160200 Sobic005G160200 Sobic003G395700--Sobic005G160200 Sobic009G042600 Sobic009G042600 Sobic004G321200--Sobic009G042600 Sobic006G141300 Sobic006G141300 Sobic004G321200--Sobic006G141300 Sobic007G081900 Sobic007G081900 Sobic004G321200--Sobic007G081900 Sobic007G016800 Sobic007G016800 Sobic004G321200--Sobic007G016800 Sobic004G321200--Sobic003G284700 Sobic007G056900 Sobic007G056900 Sobic004G321200--Sobic007G056900 Sobic002G245000 Sobic002G245000 Sobic004G321200--Sobic002G245000 Sobic006G215800 Sobic006G215800 Sobic004G321200--Sobic006G215800 Sobic004G218000 Sobic004G218000 Sobic004G321200--Sobic004G218000 Sobic010G240800--Sobic002G154400 Sobic008G057000 Sobic008G057000 Sobic010G240800--Sobic008G057000 Sobic001G222000 Sobic001G222000 Sobic010G240800--Sobic001G222000 Sobic009G032200 Sobic009G032200 Sobic010G240800--Sobic009G032200 Sobic007G039300 Sobic007G039300 Sobic010G240800--Sobic007G039300 Sobic010G240800--Sobic007G004000 Sobic001G355200 Sobic001G355200 Sobic010G240800--Sobic001G355200 Sobic002G263700 Sobic002G263700 Sobic010G240800--Sobic002G263700 Sobic007G168300 Sobic007G168300 Sobic010G240800--Sobic007G168300 Sobic009G042100 Sobic009G042100 Sobic002G154400--Sobic009G042100 Sobic002G154400--Sobic007G039300 Sobic007G053700 Sobic007G053700 Sobic002G154400--Sobic007G053700 Sobic003G349000 Sobic003G349000 Sobic002G154400--Sobic003G349000 Sobic002G154400--Sobic010G240800 Sobic004G020900 Sobic004G020900 Sobic002G154400--Sobic004G020900 Sobic002G154400--Sobic009G032200 Sobic008G017900 Sobic008G017900 Sobic002G154400--Sobic008G017900 Sobic009G069200 Sobic009G069200 Sobic002G154400--Sobic009G069200 Sobic001G278700 Sobic001G278700 Sobic003G284700--Sobic001G278700 Sobic003G055200 Sobic003G055200 Sobic003G284700--Sobic003G055200 Sobic006G210700 Sobic006G210700 Sobic003G284700--Sobic006G210700 Sobic010G273800 Sobic010G273800 Sobic003G284700--Sobic010G273800 Sobic003G284700--Sobic006G257600 Sobic004G160700 Sobic004G160700 Sobic003G284700--Sobic004G160700 Sobic002G354800 Sobic002G354800 Sobic003G284700--Sobic002G354800 Sobic002G104300 Sobic002G104300 Sobic003G284700--Sobic002G104300 Sobic004G340566 Sobic004G340566 Sobic003G284700--Sobic004G340566 Sobic009G113100 Sobic009G113100 Sobic006G257600--Sobic009G113100 Sobic006G257600--Sobic003G055200 Sobic006G257600--Sobic002G315100 Sobic006G257600--Sobic002G354800 Sobic010G223500 Sobic010G223500 Sobic006G257600--Sobic010G223500 Sobic006G257600--Sobic009G069200 Sobic002G306600 Sobic002G306600 Sobic006G257600--Sobic002G306600 Sobic006G015500 Sobic006G015500 Sobic006G257600--Sobic006G015500 Sobic006G257600--Sobic003G284700 Sobic004G049700 Sobic004G049700 Sobic007G004000--Sobic004G049700 Sobic002G127100 Sobic002G127100 Sobic007G004000--Sobic002G127100 Sobic006G161000 Sobic006G161000 Sobic007G004000--Sobic006G161000 Sobic002G388500 Sobic002G388500 Sobic007G004000--Sobic002G388500 Sobic007G009700 Sobic007G009700 Sobic007G004000--Sobic007G009700 Sobic007G004000--Sobic007G168300 Sobic006G251900 Sobic006G251900 Sobic007G004000--Sobic006G251900 Sobic010G130100 Sobic010G130100 Sobic007G004000--Sobic010G130100 Sobic003G114500 Sobic003G114500 Sobic007G004000--Sobic003G114500 Sobic002G315100--Sobic002G354800 Sobic006G091850 Sobic006G091850 Sobic002G315100--Sobic006G091850 Sobic002G315100--Sobic005G160200 Sobic002G315100--Sobic003G055200 Sobic002G230400 Sobic002G230400 Sobic002G315100--Sobic002G230400 Sobic004G014100 Sobic004G014100 Sobic002G315100--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G315100--Sobic006G143300 Sobic002G315100--Sobic009G069200 Sobic006G184200 Sobic006G184200 Sobic002G315100--Sobic006G184200 Sobic002G053200 Sobic002G053200 Sobic005G114101--Sobic002G053200 Sobic005G114101--Sobic002G154400 Sobic005G114101--Sobic007G053700 Sobic005G114101--Sobic007G004000 Sobic009G083400 Sobic009G083400 Sobic005G114101--Sobic009G083400 Sobic005G114101--Sobic007G039300 Sobic005G114101--Sobic003G349000 Sobic003G282700 Sobic003G282700 Sobic005G114101--Sobic003G282700 Sobic006G250100 Sobic006G250100 Sobic005G114101--Sobic006G250100 Sobic005G160200--Sobic004G014100 Sobic003G411700 Sobic003G411700 Sobic005G160200--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic005G160200--Sobic003G343200 Sobic005G160200--Sobic006G091850 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic010G257500 Sobic010G257500 Sobic005G160200--Sobic010G257500 Sobic001G534400 Sobic001G534400 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200
Octagon: transcription factors


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