Gene annotation
Transcriptome id Sobic.006G216200.1,Sobic.006G216200.2
Synonym Sb06g028625
Functional annotation expressed protein
UniProt A0A1Z5REZ6 , C5YG25
Pfam -
Panther DB PTHR36478 PTHR36478:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g52660.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G216200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G033600 BRCA1 C Terminus domain containing protein, expressed K10803: DNA-repair protein XRCC1
2 Sobic.006G281700 DUF803 domain containing, putative, expressed -
3 Sobic.001G014300 OsFBDUF15 - F-box and DUF domain containing protein, expressed -
4 Sobic.010G080550 - -
5 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
6 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
7 Sobic.010G254900 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14321: NUPL2, NUP42, nucleoporin-like protein 2
8 Sobic.004G223300 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
9 Sobic.002G241600 - -
10 Sobic.002G260400 - -
11 Sobic.003G230600 transcription factor X1, putative, expressed -
12 Sobic.001G308400 expressed protein -
13 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51
14 Sobic.004G072200 expressed protein K15131: mediator of RNA polymerase II transcription subunit 11
15 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
16 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
17 Sobic.002G295500 expressed protein -
18 Sobic.006G200700 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
19 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
20 Sobic.003G285000 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G216200 Sobic006G216200 Sobic010G033600 Sobic010G033600 Sobic006G216200--Sobic010G033600 Sobic006G281700 Sobic006G281700 Sobic006G216200--Sobic006G281700 Sobic001G014300 Sobic001G014300 Sobic006G216200--Sobic001G014300 Sobic010G080550 Sobic010G080550 Sobic006G216200--Sobic010G080550 Sobic009G128500 Sobic009G128500 Sobic006G216200--Sobic009G128500 Sobic004G096400 Sobic004G096400 Sobic006G216200--Sobic004G096400 Sobic010G254900 Sobic010G254900 Sobic006G216200--Sobic010G254900 Sobic004G223300 Sobic004G223300 Sobic006G216200--Sobic004G223300 Sobic002G241600 Sobic002G241600 Sobic006G216200--Sobic002G241600 Sobic010G033600--Sobic006G216200 Sobic001G156900 Sobic001G156900 Sobic010G033600--Sobic001G156900 Sobic010G033600--Sobic006G281700 Sobic004G122900 Sobic004G122900 Sobic010G033600--Sobic004G122900 Sobic003G182300 Sobic003G182300 Sobic010G033600--Sobic003G182300 Sobic009G122500 Sobic009G122500 Sobic010G033600--Sobic009G122500 Sobic003G012000 Sobic003G012000 Sobic010G033600--Sobic003G012000 Sobic010G033600--Sobic004G096400 Sobic003G230600 Sobic003G230600 Sobic010G033600--Sobic003G230600 Sobic002G063900 Sobic002G063900 Sobic006G281700--Sobic002G063900 Sobic002G260400 Sobic002G260400 Sobic006G281700--Sobic002G260400 Sobic004G246100 Sobic004G246100 Sobic006G281700--Sobic004G246100 Sobic003G160000 Sobic003G160000 Sobic006G281700--Sobic003G160000 Sobic009G260650 Sobic009G260650 Sobic006G281700--Sobic009G260650 Sobic001G042200 Sobic001G042200 Sobic006G281700--Sobic001G042200 Sobic007G218000 Sobic007G218000 Sobic006G281700--Sobic007G218000 Sobic010G204400 Sobic010G204400 Sobic006G281700--Sobic010G204400 Sobic002G056701 Sobic002G056701 Sobic006G281700--Sobic002G056701 Sobic008G054600 Sobic008G054600 Sobic001G014300--Sobic008G054600 Sobic003G312700 Sobic003G312700 Sobic001G014300--Sobic003G312700 Sobic002G051750 Sobic002G051750 Sobic001G014300--Sobic002G051750 Sobic001G014300--Sobic004G096400 Sobic004G265500 Sobic004G265500 Sobic001G014300--Sobic004G265500 Sobic006G080400 Sobic006G080400 Sobic001G014300--Sobic006G080400 Sobic003G163200 Sobic003G163200 Sobic001G014300--Sobic003G163200 Sobic002G154000 Sobic002G154000 Sobic001G014300--Sobic002G154000 Sobic006G240100 Sobic006G240100 Sobic001G014300--Sobic006G240100 Sobic009G098300 Sobic009G098300 Sobic010G080550--Sobic009G098300 Sobic002G127200 Sobic002G127200 Sobic010G080550--Sobic002G127200 Sobic010G080550--Sobic001G014300 Sobic005G108000 Sobic005G108000 Sobic010G080550--Sobic005G108000 Sobic004G149700 Sobic004G149700 Sobic010G080550--Sobic004G149700 Sobic010G080550--Sobic006G216200 Sobic010G080550--Sobic004G223300 Sobic001G245000 Sobic001G245000 Sobic010G080550--Sobic001G245000 Sobic006G154100 Sobic006G154100 Sobic010G080550--Sobic006G154100 Sobic010G169900 Sobic010G169900 Sobic009G128500--Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic009G128500--Sobic001G308400 Sobic003G193500 Sobic003G193500 Sobic009G128500--Sobic003G193500 Sobic009G128500--Sobic009G122500 Sobic002G355800 Sobic002G355800 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic010G223400 Sobic010G223400 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic006G234700 Sobic006G234700 Sobic004G096400--Sobic006G234700 Sobic009G192300 Sobic009G192300 Sobic004G096400--Sobic009G192300 Sobic010G059500 Sobic010G059500 Sobic004G096400--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G096400--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic004G096400--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic004G096400--Sobic001G433800 Sobic003G249600 Sobic003G249600 Sobic004G096400--Sobic003G249600 Sobic006G077200 Sobic006G077200 Sobic004G096400--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic004G096400--Sobic007G132100 Sobic003G212900 Sobic003G212900 Sobic010G254900--Sobic003G212900 Sobic002G422100 Sobic002G422100 Sobic010G254900--Sobic002G422100 Sobic010G254900--Sobic006G281700 Sobic010G254900--Sobic007G218000 Sobic010G254900--Sobic001G308400 Sobic003G180900 Sobic003G180900 Sobic010G254900--Sobic003G180900 Sobic010G254900--Sobic010G204400 Sobic001G091400 Sobic001G091400 Sobic010G254900--Sobic001G091400 Sobic001G452000 Sobic001G452000 Sobic010G254900--Sobic001G452000 Sobic004G147500 Sobic004G147500 Sobic004G223300--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic004G223300--Sobic002G340900 Sobic001G065100 Sobic001G065100 Sobic004G223300--Sobic001G065100 Sobic002G042600 Sobic002G042600 Sobic004G223300--Sobic002G042600 Sobic008G124800 Sobic008G124800 Sobic004G223300--Sobic008G124800 Sobic005G062200 Sobic005G062200 Sobic004G223300--Sobic005G062200 Sobic003G039000 Sobic003G039000 Sobic004G223300--Sobic003G039000 Sobic001G382600 Sobic001G382600 Sobic004G223300--Sobic001G382600 Sobic002G401500 Sobic002G401500 Sobic004G223300--Sobic002G401500 Sobic005G090300 Sobic005G090300 Sobic002G241600--Sobic005G090300 Sobic002G241600--Sobic001G308400 Sobic002G241600--Sobic004G223300 Sobic002G241600--Sobic001G014300 Sobic002G241600--Sobic004G147500 Sobic002G241600--Sobic005G062200 Sobic001G255800 Sobic001G255800 Sobic002G241600--Sobic001G255800 Sobic003G114400 Sobic003G114400 Sobic002G241600--Sobic003G114400 Sobic001G097900 Sobic001G097900 Sobic002G241600--Sobic001G097900
Octagon: transcription factors


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