Gene annotation
Transcriptome id Sobic.005G156900.6,Sobic.005G156900.3,Sobic.005G156900.1,Sobic.005G156900.5,Sobic.005G156900.2,Sobic.005G156900.4
Synonym
Functional annotation -
UniProt A0A1B6PSR9 , A0A1Z5RJP3 , A0A1B6PSS1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
2 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G189700 - -
6 Sobic.003G310400 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
7 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
9 Sobic.005G202600 tropinone reductase 2, putative, expressed -
10 Sobic.007G034300 expressed protein -
11 Sobic.008G067200 inhibitor I family protein, putative, expressed -
12 Sobic.001G520800 expressed protein -
13 Sobic.001G068400 - -
14 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
16 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
17 Sobic.010G157000 - -
18 Sobic.003G235500 expressed protein -
19 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
20 Sobic.001G198800 -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -


Gene co-expression network
sample Sobic005G156900 Sobic005G156900 Sobic008G081200 Sobic008G081200 Sobic005G156900--Sobic008G081200 Sobic009G254600 Sobic009G254600 Sobic005G156900--Sobic009G254600 Sobic010G038500 Sobic010G038500 Sobic005G156900--Sobic010G038500 Sobic004G353700 Sobic004G353700 Sobic005G156900--Sobic004G353700 Sobic007G189700 Sobic007G189700 Sobic005G156900--Sobic007G189700 Sobic003G310400 Sobic003G310400 Sobic005G156900--Sobic003G310400 Sobic002G233300 Sobic002G233300 Sobic005G156900--Sobic002G233300 Sobic005G039600 Sobic005G039600 Sobic005G156900--Sobic005G039600 Sobic005G202600 Sobic005G202600 Sobic005G156900--Sobic005G202600 Sobic008G081200--Sobic010G038500 Sobic010G183100 Sobic010G183100 Sobic008G081200--Sobic010G183100 Sobic008G081200--Sobic009G254600 Sobic001G068400 Sobic001G068400 Sobic008G081200--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic008G081200--Sobic002G040100 Sobic004G035700 Sobic004G035700 Sobic008G081200--Sobic004G035700 Sobic003G199800 Sobic003G199800 Sobic008G081200--Sobic003G199800 Sobic008G081200--Sobic007G189700 Sobic010G276400 Sobic010G276400 Sobic008G081200--Sobic010G276400 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic001G189100 Sobic001G189100 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic003G237600 Sobic003G237600 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic009G254600--Sobic007G189700 Sobic010G038500--Sobic008G081200 Sobic010G038500--Sobic009G254600 Sobic010G038500--Sobic001G068400 Sobic010G038500--Sobic002G040100 Sobic010G038500--Sobic004G035700 Sobic010G038500--Sobic010G183100 Sobic010G038500--Sobic002G233300 Sobic010G038500--Sobic003G199800 Sobic003G131000 Sobic003G131000 Sobic010G038500--Sobic003G131000 Sobic003G234400 Sobic003G234400 Sobic004G353700--Sobic003G234400 Sobic003G036100 Sobic003G036100 Sobic004G353700--Sobic003G036100 Sobic004G353700--Sobic007G189700 Sobic010G030800 Sobic010G030800 Sobic004G353700--Sobic010G030800 Sobic001G406000 Sobic001G406000 Sobic004G353700--Sobic001G406000 Sobic009G222200 Sobic009G222200 Sobic004G353700--Sobic009G222200 Sobic002G214300 Sobic002G214300 Sobic004G353700--Sobic002G214300 Sobic004G353700--Sobic005G202600 Sobic001G111700 Sobic001G111700 Sobic004G353700--Sobic001G111700 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic007G189700--Sobic001G406000 Sobic001G198800 Sobic001G198800 Sobic003G310400--Sobic001G198800 Sobic002G152700 Sobic002G152700 Sobic003G310400--Sobic002G152700 Sobic008G021300 Sobic008G021300 Sobic003G310400--Sobic008G021300 Sobic002G033800 Sobic002G033800 Sobic003G310400--Sobic002G033800 Sobic003G310400--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic003G310400--Sobic004G023200 Sobic003G310400--Sobic010G276400 Sobic001G520800 Sobic001G520800 Sobic003G310400--Sobic001G520800 Sobic001G448400 Sobic001G448400 Sobic003G310400--Sobic001G448400 Sobic002G233300--Sobic010G038500 Sobic002G233300--Sobic003G199800 Sobic002G233300--Sobic002G040100 Sobic001G344600 Sobic001G344600 Sobic002G233300--Sobic001G344600 Sobic009G191300 Sobic009G191300 Sobic002G233300--Sobic009G191300 Sobic007G034300 Sobic007G034300 Sobic002G233300--Sobic007G034300 Sobic001G338700 Sobic001G338700 Sobic002G233300--Sobic001G338700 Sobic002G233300--Sobic001G520800 Sobic008G038300 Sobic008G038300 Sobic002G233300--Sobic008G038300 Sobic005G039600--Sobic001G520800 Sobic005G039600--Sobic007G034300 Sobic005G039600--Sobic003G199800 Sobic005G039600--Sobic003G310400 Sobic003G231800 Sobic003G231800 Sobic005G039600--Sobic003G231800 Sobic003G431900 Sobic003G431900 Sobic005G039600--Sobic003G431900 Sobic009G244300 Sobic009G244300 Sobic005G039600--Sobic009G244300 Sobic004G035500 Sobic004G035500 Sobic005G039600--Sobic004G035500 Sobic005G030500 Sobic005G030500 Sobic005G039600--Sobic005G030500 Sobic005G202600--Sobic010G030800 Sobic005G202600--Sobic003G036100 Sobic005G202600--Sobic007G189700 Sobic005G202600--Sobic004G353700 Sobic005G202600--Sobic001G111700 Sobic002G329400 Sobic002G329400 Sobic005G202600--Sobic002G329400 Sobic005G202600--Sobic009G222200 Sobic005G202600--Sobic001G189100
Octagon: transcription factors


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