Gene annotation
Transcriptome id Sobic.005G183300.1
Synonym Sb05g024180, RPS3, RPM1
Functional annotation resistance protein, putative, expressed
UniProt A0A1B6PTB5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF402
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53350 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os08g14850.1 : resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a052054
Brachypodium KQJ85931
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G343300 3-beta-hydroxy-delta5-steroid dehydrogenase (At)(PubMedID : 27208977)@NAD dependent epimerase/dehydratase family protein, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
2 Sobic.001G336800 - -
3 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
4 Sobic.002G397400 thiol protease SEN102 precursor, putative, expressed -
5 Sobic.005G218700 NB-ARC domain containing protein, expressed -
6 Sobic.005G183500 resistance protein, putative, expressed -
7 Sobic.001G448750 - -
8 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
9 Sobic.005G029400 strictosidine synthase, putative, expressed -
10 Sobic.001G357800 amino acid permease family protein, putative, expressed -
11 Sobic.002G397300 thiol protease SEN102 precursor, putative, expressed -
12 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
13 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.009G119400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@glycosyl hydrolases family 17, putative, expressed -
15 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
16 Sobic.009G215600 expressed protein -
17 Sobic.010G120200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
18 Sobic.005G212400 Leucine Rich Repeat family protein, expressed -
19 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase


Gene co-expression network
sample Sobic005G183300 Sobic005G183300 Sobic001G343300 Sobic001G343300 Sobic005G183300--Sobic001G343300 Sobic001G336800 Sobic001G336800 Sobic005G183300--Sobic001G336800 Sobic001G307300 Sobic001G307300 Sobic005G183300--Sobic001G307300 Sobic002G397400 Sobic002G397400 Sobic005G183300--Sobic002G397400 Sobic005G218700 Sobic005G218700 Sobic005G183300--Sobic005G218700 Sobic005G183500 Sobic005G183500 Sobic005G183300--Sobic005G183500 Sobic001G448750 Sobic001G448750 Sobic005G183300--Sobic001G448750 Sobic008G163200 Sobic008G163200 Sobic005G183300--Sobic008G163200 Sobic005G029400 Sobic005G029400 Sobic005G183300--Sobic005G029400 Sobic001G199632 Sobic001G199632 Sobic001G343300--Sobic001G199632 Sobic009G119400 Sobic009G119400 Sobic001G343300--Sobic009G119400 Sobic001G343300--Sobic008G163200 Sobic001G343300--Sobic005G183300 Sobic002G329500 Sobic002G329500 Sobic001G343300--Sobic002G329500 Sobic004G060700 Sobic004G060700 Sobic001G343300--Sobic004G060700 Sobic001G435600 Sobic001G435600 Sobic001G343300--Sobic001G435600 Sobic007G009600 Sobic007G009600 Sobic001G343300--Sobic007G009600 Sobic001G343300--Sobic001G307300 Sobic001G336800--Sobic001G307300 Sobic009G215600 Sobic009G215600 Sobic001G336800--Sobic009G215600 Sobic009G151000 Sobic009G151000 Sobic001G336800--Sobic009G151000 Sobic001G275600 Sobic001G275600 Sobic001G336800--Sobic001G275600 Sobic009G070600 Sobic009G070600 Sobic001G336800--Sobic009G070600 Sobic001G336800--Sobic009G119400 Sobic001G336800--Sobic008G163200 Sobic002G141100 Sobic002G141100 Sobic001G336800--Sobic002G141100 Sobic001G336800--Sobic005G029400 Sobic001G307300--Sobic009G119400 Sobic001G307300--Sobic001G336800 Sobic010G196400 Sobic010G196400 Sobic001G307300--Sobic010G196400 Sobic001G307300--Sobic001G275600 Sobic001G307300--Sobic009G215600 Sobic001G307300--Sobic002G397400 Sobic002G351000 Sobic002G351000 Sobic001G307300--Sobic002G351000 Sobic001G307300--Sobic009G151000 Sobic001G265900 Sobic001G265900 Sobic001G307300--Sobic001G265900 Sobic005G147800 Sobic005G147800 Sobic002G397400--Sobic005G147800 Sobic005G212400 Sobic005G212400 Sobic002G397400--Sobic005G212400 Sobic007G142300 Sobic007G142300 Sobic002G397400--Sobic007G142300 Sobic010G124200 Sobic010G124200 Sobic002G397400--Sobic010G124200 Sobic002G397400--Sobic001G265900 Sobic010G107200 Sobic010G107200 Sobic002G397400--Sobic010G107200 Sobic001G127700 Sobic001G127700 Sobic002G397400--Sobic001G127700 Sobic005G209900 Sobic005G209900 Sobic002G397400--Sobic005G209900 Sobic002G397400--Sobic001G307300 Sobic003G114200 Sobic003G114200 Sobic005G218700--Sobic003G114200 Sobic008G189500 Sobic008G189500 Sobic005G218700--Sobic008G189500 Sobic005G218600 Sobic005G218600 Sobic005G218700--Sobic005G218600 Sobic001G472000 Sobic001G472000 Sobic005G218700--Sobic001G472000 Sobic001G255300 Sobic001G255300 Sobic005G218700--Sobic001G255300 Sobic003G068300 Sobic003G068300 Sobic005G218700--Sobic003G068300 Sobic005G218700--Sobic008G163200 Sobic005G218700--Sobic009G070600 Sobic007G170800 Sobic007G170800 Sobic005G218700--Sobic007G170800 Sobic001G221300 Sobic001G221300 Sobic005G183500--Sobic001G221300 Sobic002G271700 Sobic002G271700 Sobic005G183500--Sobic002G271700 Sobic003G187000 Sobic003G187000 Sobic005G183500--Sobic003G187000 Sobic005G183500--Sobic008G189500 Sobic003G150600 Sobic003G150600 Sobic005G183500--Sobic003G150600 Sobic005G183500--Sobic005G029400 Sobic003G433900 Sobic003G433900 Sobic005G183500--Sobic003G433900 Sobic002G341500 Sobic002G341500 Sobic005G183500--Sobic002G341500 Sobic005G183500--Sobic001G472000 Sobic002G397100 Sobic002G397100 Sobic001G448750--Sobic002G397100 Sobic002G397300 Sobic002G397300 Sobic001G448750--Sobic002G397300 Sobic001G448750--Sobic005G218600 Sobic001G448750--Sobic001G343300 Sobic001G448750--Sobic005G183300 Sobic001G379300 Sobic001G379300 Sobic001G448750--Sobic001G379300 Sobic001G448750--Sobic007G009600 Sobic001G448750--Sobic002G397400 Sobic001G448750--Sobic001G336800 Sobic002G415300 Sobic002G415300 Sobic008G163200--Sobic002G415300 Sobic008G163200--Sobic004G060700 Sobic002G415400 Sobic002G415400 Sobic008G163200--Sobic002G415400 Sobic002G416950 Sobic002G416950 Sobic008G163200--Sobic002G416950 Sobic008G163200--Sobic007G170800 Sobic008G163200--Sobic003G068300 Sobic008G163200--Sobic001G379300 Sobic008G163200--Sobic001G255300 Sobic008G163200--Sobic001G435600 Sobic005G029400--Sobic008G189500 Sobic005G029400--Sobic001G255300 Sobic005G029400--Sobic009G070600 Sobic003G007800 Sobic003G007800 Sobic005G029400--Sobic003G007800 Sobic005G029400--Sobic001G379300 Sobic007G069500 Sobic007G069500 Sobic005G029400--Sobic007G069500 Sobic002G128600 Sobic002G128600 Sobic005G029400--Sobic002G128600 Sobic003G317800 Sobic003G317800 Sobic005G029400--Sobic003G317800 Sobic004G328900 Sobic004G328900 Sobic005G029400--Sobic004G328900
Octagon: transcription factors


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