Gene annotation
Transcriptome id Sobic.005G208000.1
Synonym Sb05g026180
Functional annotation RGH1A, putative, expressed
UniProt C5Y7H3
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF541
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G58602 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g07330.2 : RGH1A, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G008400 brevis radix, putative, expressed -
2 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.005G110508 - -
4 Sobic.008G138700 MLA12, putative, expressed -
5 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
6 Sobic.001G506700 exostosin family domain containing protein, expressed -
7 Sobic.001G506500 exostosin family domain containing protein, expressed -
8 Sobic.005G110511 - -
9 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
10 Sobic.005G066500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
11 Sobic.008G055700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
13 Sobic.006G009700 expressed protein -
14 Sobic.006G092100 no apical meristem protein, putative, expressed -
15 Sobic.001G526500 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
17 Sobic.003G083800 DNA binding protein, putative, expressed -
18 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
19 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'


Gene co-expression network
sample Sobic005G208000 Sobic005G208000 Sobic001G008400 Sobic001G008400 Sobic005G208000--Sobic001G008400 Sobic001G373500 Sobic001G373500 Sobic005G208000--Sobic001G373500 Sobic005G110508 Sobic005G110508 Sobic005G208000--Sobic005G110508 Sobic008G138700 Sobic008G138700 Sobic005G208000--Sobic008G138700 Sobic010G082100 Sobic010G082100 Sobic005G208000--Sobic010G082100 Sobic001G506700 Sobic001G506700 Sobic005G208000--Sobic001G506700 Sobic001G506500 Sobic001G506500 Sobic005G208000--Sobic001G506500 Sobic005G110511 Sobic005G110511 Sobic005G208000--Sobic005G110511 Sobic001G189500 Sobic001G189500 Sobic005G208000--Sobic001G189500 Sobic008G178901 Sobic008G178901 Sobic001G008400--Sobic008G178901 Sobic009G206800 Sobic009G206800 Sobic001G008400--Sobic009G206800 Sobic002G005300 Sobic002G005300 Sobic001G008400--Sobic002G005300 Sobic010G014200 Sobic010G014200 Sobic001G008400--Sobic010G014200 Sobic006G278400 Sobic006G278400 Sobic001G008400--Sobic006G278400 Sobic007G184700 Sobic007G184700 Sobic001G008400--Sobic007G184700 Sobic007G052600 Sobic007G052600 Sobic001G008400--Sobic007G052600 Sobic010G161300 Sobic010G161300 Sobic001G008400--Sobic010G161300 Sobic002G279300 Sobic002G279300 Sobic001G008400--Sobic002G279300 Sobic005G035000 Sobic005G035000 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic005G110508--Sobic005G110511 Sobic005G066500 Sobic005G066500 Sobic005G110508--Sobic005G066500 Sobic004G312500 Sobic004G312500 Sobic005G110508--Sobic004G312500 Sobic005G066300 Sobic005G066300 Sobic005G110508--Sobic005G066300 Sobic005G066366 Sobic005G066366 Sobic005G110508--Sobic005G066366 Sobic005G071900 Sobic005G071900 Sobic005G110508--Sobic005G071900 Sobic002G411000 Sobic002G411000 Sobic005G110508--Sobic002G411000 Sobic005G197350 Sobic005G197350 Sobic005G110508--Sobic005G197350 Sobic005G079400 Sobic005G079400 Sobic005G110508--Sobic005G079400 Sobic006G009700 Sobic006G009700 Sobic008G138700--Sobic006G009700 Sobic009G060700 Sobic009G060700 Sobic008G138700--Sobic009G060700 Sobic008G138700--Sobic005G066500 Sobic005G065700 Sobic005G065700 Sobic008G138700--Sobic005G065700 Sobic008G138700--Sobic005G110511 Sobic008G138700--Sobic005G071900 Sobic008G138700--Sobic004G312500 Sobic006G092100 Sobic006G092100 Sobic008G138700--Sobic006G092100 Sobic010G213600 Sobic010G213600 Sobic008G138700--Sobic010G213600 Sobic003G240500 Sobic003G240500 Sobic010G082100--Sobic003G240500 Sobic010G082100--Sobic001G506500 Sobic007G007300 Sobic007G007300 Sobic010G082100--Sobic007G007300 Sobic005G110514 Sobic005G110514 Sobic010G082100--Sobic005G110514 Sobic009G106100 Sobic009G106100 Sobic010G082100--Sobic009G106100 Sobic006G266800 Sobic006G266800 Sobic010G082100--Sobic006G266800 Sobic004G308500 Sobic004G308500 Sobic010G082100--Sobic004G308500 Sobic001G274400 Sobic001G274400 Sobic010G082100--Sobic001G274400 Sobic010G170150 Sobic010G170150 Sobic010G082100--Sobic010G170150 Sobic001G506700--Sobic002G411000 Sobic001G506700--Sobic005G065700 Sobic002G019100 Sobic002G019100 Sobic001G506700--Sobic002G019100 Sobic001G506700--Sobic005G071900 Sobic001G506600 Sobic001G506600 Sobic001G506700--Sobic001G506600 Sobic006G209000 Sobic006G209000 Sobic001G506700--Sobic006G209000 Sobic001G506700--Sobic006G009700 Sobic001G506700--Sobic005G066300 Sobic001G503000 Sobic001G503000 Sobic001G506700--Sobic001G503000 Sobic001G506500--Sobic010G082100 Sobic001G506500--Sobic003G240500 Sobic005G048400 Sobic005G048400 Sobic001G506500--Sobic005G048400 Sobic003G176300 Sobic003G176300 Sobic001G506500--Sobic003G176300 Sobic001G506500--Sobic007G007300 Sobic001G506500--Sobic004G308500 Sobic001G070100 Sobic001G070100 Sobic001G506500--Sobic001G070100 Sobic001G526500 Sobic001G526500 Sobic001G506500--Sobic001G526500 Sobic007G149000 Sobic007G149000 Sobic001G506500--Sobic007G149000 Sobic005G110511--Sobic005G066500 Sobic010G242800 Sobic010G242800 Sobic005G110511--Sobic010G242800 Sobic005G110511--Sobic005G066366 Sobic005G110511--Sobic004G312500 Sobic005G110511--Sobic005G065700 Sobic005G110511--Sobic005G071900 Sobic005G110511--Sobic002G029500 Sobic007G064900 Sobic007G064900 Sobic005G110511--Sobic007G064900 Sobic008G033100 Sobic008G033100 Sobic005G110511--Sobic008G033100 Sobic001G189500--Sobic001G373500 Sobic002G277700 Sobic002G277700 Sobic001G189500--Sobic002G277700 Sobic001G189500--Sobic005G035000 Sobic001G302300 Sobic001G302300 Sobic001G189500--Sobic001G302300 Sobic003G226100 Sobic003G226100 Sobic001G189500--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G189500--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic010G194500 Sobic010G194500 Sobic001G189500--Sobic010G194500
Octagon: transcription factors


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