Gene annotation
Transcriptome id Sobic.006G007800.1
Synonym Sb06g000810
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
legume lectins beta domain containing protein, putative, expressed
UniProt C5YBN6
Pfam PF00139
Panther DB PTHR27007 PTHR27007:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g01950.1 : legume lectins beta domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a012196
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G016800 - -
2 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
3 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
4 Sobic.007G003200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.006G126400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
6 Sobic.009G038501 - -
7 Sobic.005G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@laccase-15 precursor, putative, expressed K05909: laccase
8 Sobic.003G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
9 Sobic.004G004700 - -
10 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.004G006966 - -
12 Sobic.004G006966 - -
13 Sobic.004G006966 - -
14 Sobic.004G006966 - -
15 Sobic.004G006966 - -
16 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
17 Sobic.004G308000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@EF hand family protein, putative, expressed -
18 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
19 Sobic.001G212000 GEM, putative, expressed -
20 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G007800 Sobic006G007800 Sobic010G016800 Sobic010G016800 Sobic006G007800--Sobic010G016800 Sobic001G101400 Sobic001G101400 Sobic006G007800--Sobic001G101400 Sobic004G074500 Sobic004G074500 Sobic006G007800--Sobic004G074500 Sobic007G003200 Sobic007G003200 Sobic006G007800--Sobic007G003200 Sobic006G126400 Sobic006G126400 Sobic006G007800--Sobic006G126400 Sobic009G038501 Sobic009G038501 Sobic006G007800--Sobic009G038501 Sobic005G215300 Sobic005G215300 Sobic006G007800--Sobic005G215300 Sobic003G085300 Sobic003G085300 Sobic006G007800--Sobic003G085300 Sobic004G004700 Sobic004G004700 Sobic006G007800--Sobic004G004700 Sobic004G006966 Sobic004G006966 Sobic010G016800--Sobic004G006966 Sobic010G016800--Sobic001G101400 Sobic003G374150 Sobic003G374150 Sobic010G016800--Sobic003G374150 Sobic001G483500 Sobic001G483500 Sobic010G016800--Sobic001G483500 Sobic005G136800 Sobic005G136800 Sobic010G016800--Sobic005G136800 Sobic001G101400--Sobic001G483500 Sobic001G101400--Sobic010G016800 Sobic001G101400--Sobic005G215300 Sobic001G212000 Sobic001G212000 Sobic001G101400--Sobic001G212000 Sobic001G101400--Sobic004G006966 Sobic004G074500--Sobic003G085300 Sobic002G090200 Sobic002G090200 Sobic004G074500--Sobic002G090200 Sobic004G308000 Sobic004G308000 Sobic004G074500--Sobic004G308000 Sobic004G074500--Sobic007G003200 Sobic004G246200 Sobic004G246200 Sobic004G074500--Sobic004G246200 Sobic004G074500--Sobic001G101400 Sobic004G074500--Sobic010G016800 Sobic004G074500--Sobic001G212000 Sobic006G140000 Sobic006G140000 Sobic004G074500--Sobic006G140000 Sobic007G003200--Sobic001G101400 Sobic007G003200--Sobic004G074500 Sobic007G003200--Sobic010G016800 Sobic007G003200--Sobic001G212000 Sobic006G261550 Sobic006G261550 Sobic007G003200--Sobic006G261550 Sobic008G024400 Sobic008G024400 Sobic007G003200--Sobic008G024400 Sobic007G003200--Sobic003G085300 Sobic002G209000 Sobic002G209000 Sobic007G003200--Sobic002G209000 Sobic007G003200--Sobic001G483500 Sobic003G441100 Sobic003G441100 Sobic006G126400--Sobic003G441100 Sobic006G126400--Sobic010G016800 Sobic001G251900 Sobic001G251900 Sobic006G126400--Sobic001G251900 Sobic006G126400--Sobic004G006966 Sobic006G126400--Sobic001G101400 Sobic008G144500 Sobic008G144500 Sobic009G038501--Sobic008G144500 Sobic004G236600 Sobic004G236600 Sobic009G038501--Sobic004G236600 Sobic004G236000 Sobic004G236000 Sobic009G038501--Sobic004G236000 Sobic003G360900 Sobic003G360900 Sobic009G038501--Sobic003G360900 Sobic009G038501--Sobic001G251900 Sobic005G152100 Sobic005G152100 Sobic009G038501--Sobic005G152100 Sobic009G038501--Sobic001G212000 Sobic007G178100 Sobic007G178100 Sobic009G038501--Sobic007G178100 Sobic009G236200 Sobic009G236200 Sobic009G038501--Sobic009G236200 Sobic005G215300--Sobic001G101400 Sobic005G215300--Sobic010G016800 Sobic009G061300 Sobic009G061300 Sobic005G215300--Sobic009G061300 Sobic005G215300--Sobic004G006966 Sobic005G215300--Sobic001G483500 Sobic003G085300--Sobic004G308000 Sobic003G085300--Sobic001G212000 Sobic003G085300--Sobic005G152100 Sobic003G085300--Sobic004G074500 Sobic003G085300--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic003G085300--Sobic001G412700 Sobic003G085300--Sobic008G024400 Sobic005G215900 Sobic005G215900 Sobic003G085300--Sobic005G215900 Sobic003G085300--Sobic001G101400 Sobic004G004700--Sobic010G016800 Sobic004G004700--Sobic001G101400 Sobic004G004700--Sobic004G006966 Sobic005G215832 Sobic005G215832 Sobic004G004700--Sobic005G215832 Sobic004G004700--Sobic007G003200 Sobic004G004700--Sobic005G215300
Octagon: transcription factors


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