Gene annotation
Transcriptome id Sobic.006G008100.4,Sobic.006G008100.3,Sobic.006G008100.2,Sobic.006G008100.5
Synonym Sb06g000830
Functional annotation expressed protein
UniProt A0A1Z5RBY7 , C5YBP0
Pfam -
Panther DB PTHR33430 PTHR33430:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01580 : -
RAP-DB (Rice) LOC_Os04g01960.1 : expressed protein
MaizeGDB (Corn) Zm00025a012197
Brachypodium KQK18059
Barley HORVU2Hr1G004920.1 , HORVU2Hr1G005020.1 , HORVU2Hr1G005020.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G093700 tetraspanin family protein, putative, expressed -
2 Sobic.007G088200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K17623: PUDP, pseudouridine 5'-phosphatase
3 Sobic.009G235400 - -
4 Sobic.003G336700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.006G054200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@multidrug resistance-associated protein 9("PubMedID : 26759170,PubMedID : 24597475")@multidrug resistance-associated protein, putative, expressed -
6 Sobic.003G312600 expressed protein -
7 Sobic.010G100700 HEAT repeat family protein, putative, expressed -
8 Sobic.004G209100 GRAM domain containing protein, expressed -
9 Sobic.003G219300 leaf senescence related protein, putative, expressed -
10 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
11 Sobic.010G195000 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
12 Sobic.002G127300 - -
13 Sobic.001G245100 - -
14 Sobic.007G183600 expressed protein -
15 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
16 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.002G297100 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
18 Sobic.001G285100 expressed protein -
19 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
20 Sobic.005G228650 - -


Gene co-expression network
sample Sobic006G008100 Sobic006G008100 Sobic004G093700 Sobic004G093700 Sobic006G008100--Sobic004G093700 Sobic007G088200 Sobic007G088200 Sobic006G008100--Sobic007G088200 Sobic009G235400 Sobic009G235400 Sobic006G008100--Sobic009G235400 Sobic003G336700 Sobic003G336700 Sobic006G008100--Sobic003G336700 Sobic006G054200 Sobic006G054200 Sobic006G008100--Sobic006G054200 Sobic003G312600 Sobic003G312600 Sobic006G008100--Sobic003G312600 Sobic010G100700 Sobic010G100700 Sobic006G008100--Sobic010G100700 Sobic004G209100 Sobic004G209100 Sobic006G008100--Sobic004G209100 Sobic003G219300 Sobic003G219300 Sobic006G008100--Sobic003G219300 Sobic004G093700--Sobic010G100700 Sobic003G063400 Sobic003G063400 Sobic004G093700--Sobic003G063400 Sobic009G026600 Sobic009G026600 Sobic004G093700--Sobic009G026600 Sobic008G072800 Sobic008G072800 Sobic004G093700--Sobic008G072800 Sobic007G183600 Sobic007G183600 Sobic004G093700--Sobic007G183600 Sobic004G250400 Sobic004G250400 Sobic004G093700--Sobic004G250400 Sobic008G142200 Sobic008G142200 Sobic004G093700--Sobic008G142200 Sobic007G141900 Sobic007G141900 Sobic004G093700--Sobic007G141900 Sobic002G324801 Sobic002G324801 Sobic004G093700--Sobic002G324801 Sobic001G476600 Sobic001G476600 Sobic007G088200--Sobic001G476600 Sobic001G370800 Sobic001G370800 Sobic007G088200--Sobic001G370800 Sobic007G088200--Sobic009G026600 Sobic009G088300 Sobic009G088300 Sobic007G088200--Sobic009G088300 Sobic008G037300 Sobic008G037300 Sobic007G088200--Sobic008G037300 Sobic003G124400 Sobic003G124400 Sobic007G088200--Sobic003G124400 Sobic007G088200--Sobic004G093700 Sobic002G309300 Sobic002G309300 Sobic007G088200--Sobic002G309300 Sobic003G263900 Sobic003G263900 Sobic007G088200--Sobic003G263900 Sobic006G045601 Sobic006G045601 Sobic009G235400--Sobic006G045601 Sobic001G100300 Sobic001G100300 Sobic009G235400--Sobic001G100300 Sobic003G174500 Sobic003G174500 Sobic009G235400--Sobic003G174500 Sobic001G261452 Sobic001G261452 Sobic009G235400--Sobic001G261452 Sobic009G186300 Sobic009G186300 Sobic009G235400--Sobic009G186300 Sobic005G118800 Sobic005G118800 Sobic009G235400--Sobic005G118800 Sobic009G235400--Sobic004G093700 Sobic010G129100 Sobic010G129100 Sobic009G235400--Sobic010G129100 Sobic010G195000 Sobic010G195000 Sobic009G235400--Sobic010G195000 Sobic003G336700--Sobic003G263900 Sobic001G383200 Sobic001G383200 Sobic003G336700--Sobic001G383200 Sobic006G255200 Sobic006G255200 Sobic003G336700--Sobic006G255200 Sobic003G336700--Sobic009G088300 Sobic002G398600 Sobic002G398600 Sobic003G336700--Sobic002G398600 Sobic004G072201 Sobic004G072201 Sobic003G336700--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic003G336700--Sobic001G109400 Sobic002G187900 Sobic002G187900 Sobic003G336700--Sobic002G187900 Sobic003G336700--Sobic002G309300 Sobic002G375500 Sobic002G375500 Sobic006G054200--Sobic002G375500 Sobic010G274700 Sobic010G274700 Sobic006G054200--Sobic010G274700 Sobic006G145300 Sobic006G145300 Sobic006G054200--Sobic006G145300 Sobic010G174000 Sobic010G174000 Sobic006G054200--Sobic010G174000 Sobic006G054200--Sobic004G209100 Sobic003G210500 Sobic003G210500 Sobic006G054200--Sobic003G210500 Sobic002G297100 Sobic002G297100 Sobic006G054200--Sobic002G297100 Sobic003G358150 Sobic003G358150 Sobic006G054200--Sobic003G358150 Sobic006G223101 Sobic006G223101 Sobic006G054200--Sobic006G223101 Sobic003G312800 Sobic003G312800 Sobic003G312600--Sobic003G312800 Sobic002G398300 Sobic002G398300 Sobic003G312600--Sobic002G398300 Sobic001G190900 Sobic001G190900 Sobic003G312600--Sobic001G190900 Sobic001G239000 Sobic001G239000 Sobic003G312600--Sobic001G239000 Sobic003G312900 Sobic003G312900 Sobic003G312600--Sobic003G312900 Sobic003G312600--Sobic001G476600 Sobic007G133733 Sobic007G133733 Sobic003G312600--Sobic007G133733 Sobic003G312600--Sobic004G209100 Sobic005G027350 Sobic005G027350 Sobic003G312600--Sobic005G027350 Sobic010G100700--Sobic004G093700 Sobic010G100700--Sobic008G072800 Sobic003G023450 Sobic003G023450 Sobic010G100700--Sobic003G023450 Sobic010G100700--Sobic007G141900 Sobic010G100700--Sobic008G142200 Sobic010G100700--Sobic003G063400 Sobic010G100700--Sobic002G324801 Sobic002G012100 Sobic002G012100 Sobic010G100700--Sobic002G012100 Sobic008G132500 Sobic008G132500 Sobic010G100700--Sobic008G132500 Sobic004G209100--Sobic008G132500 Sobic004G209100--Sobic003G312900 Sobic004G209100--Sobic005G118800 Sobic005G180850 Sobic005G180850 Sobic004G209100--Sobic005G180850 Sobic004G209100--Sobic006G145300 Sobic010G235100 Sobic010G235100 Sobic004G209100--Sobic010G235100 Sobic003G232600 Sobic003G232600 Sobic004G209100--Sobic003G232600 Sobic004G209100--Sobic003G312800 Sobic005G090800 Sobic005G090800 Sobic004G209100--Sobic005G090800 Sobic003G272000 Sobic003G272000 Sobic003G219300--Sobic003G272000 Sobic006G041200 Sobic006G041200 Sobic003G219300--Sobic006G041200 Sobic003G219300--Sobic008G132500 Sobic001G250750 Sobic001G250750 Sobic003G219300--Sobic001G250750 Sobic007G182300 Sobic007G182300 Sobic003G219300--Sobic007G182300 Sobic002G200400 Sobic002G200400 Sobic003G219300--Sobic002G200400 Sobic002G226200 Sobic002G226200 Sobic003G219300--Sobic002G226200 Sobic003G219300--Sobic010G235100 Sobic006G072701 Sobic006G072701 Sobic003G219300--Sobic006G072701
Octagon: transcription factors


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