Gene annotation
Transcriptome id Sobic.006G154000.1
Synonym TCP-like gene;SbTCP15;SbTCP15, Sb06g023130
Functional annotation PCF-like (ClassI) Subclade 2 TCP (PubMedID : 21444336)
"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)." (PubMedID : 27917941)
"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)" (PubMedID : 28383054)
TCP family transcription factor, putative, expressed
UniProt C5YCH7
Pfam PF03634
Panther DB PTHR31072 PTHR31072:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23280 : TCP family transcription factor
RAP-DB (Rice) LOC_Os04g44440.1 : TCP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056544 , Zm00025a032088
Brachypodium KQK00474
Barley HORVU2Hr1G090640.1
Wheat TraesCS6B02G262600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
2 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
3 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
4 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
5 Sobic.007G152300 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
6 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
7 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
8 Sobic.005G168400 expressed protein -
9 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
10 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.007G180200 NC domain-containing protein, putative, expressed -
12 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.010G014500 aspartic protease, putative, expressed -
15 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
16 Sobic.002G360500 expressed protein -
17 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
19 Sobic.001G518000 protein kinase, putative, expressed -
20 Sobic.003G300200 expressed protein -


Gene co-expression network
sample Sobic006G154000 Sobic006G154000 Sobic010G235300 Sobic010G235300 Sobic006G154000--Sobic010G235300 Sobic001G286700 Sobic001G286700 Sobic006G154000--Sobic001G286700 Sobic007G165800 Sobic007G165800 Sobic006G154000--Sobic007G165800 Sobic001G434100 Sobic001G434100 Sobic006G154000--Sobic001G434100 Sobic007G152300 Sobic007G152300 Sobic006G154000--Sobic007G152300 Sobic005G199700 Sobic005G199700 Sobic006G154000--Sobic005G199700 Sobic004G003700 Sobic004G003700 Sobic006G154000--Sobic004G003700 Sobic005G168400 Sobic005G168400 Sobic006G154000--Sobic005G168400 Sobic001G384700 Sobic001G384700 Sobic006G154000--Sobic001G384700 Sobic010G235300--Sobic001G286700 Sobic005G009600 Sobic005G009600 Sobic010G235300--Sobic005G009600 Sobic006G273600 Sobic006G273600 Sobic010G235300--Sobic006G273600 Sobic003G027100 Sobic003G027100 Sobic010G235300--Sobic003G027100 Sobic007G170100 Sobic007G170100 Sobic010G235300--Sobic007G170100 Sobic010G235300--Sobic007G165800 Sobic010G166300 Sobic010G166300 Sobic010G235300--Sobic010G166300 Sobic003G178500 Sobic003G178500 Sobic010G235300--Sobic003G178500 Sobic002G363300 Sobic002G363300 Sobic010G235300--Sobic002G363300 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic003G338700 Sobic003G338700 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic007G165800--Sobic004G274600 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic007G165800--Sobic010G235300 Sobic001G199400 Sobic001G199400 Sobic007G165800--Sobic001G199400 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700 Sobic001G434100--Sobic007G165800 Sobic001G434100--Sobic004G274600 Sobic001G434100--Sobic001G286700 Sobic001G434100--Sobic003G027100 Sobic001G434100--Sobic001G199400 Sobic001G470200 Sobic001G470200 Sobic001G434100--Sobic001G470200 Sobic007G032100 Sobic007G032100 Sobic001G434100--Sobic007G032100 Sobic001G434100--Sobic010G235300 Sobic004G357000 Sobic004G357000 Sobic001G434100--Sobic004G357000 Sobic007G152300--Sobic005G168400 Sobic007G152300--Sobic004G003700 Sobic001G143400 Sobic001G143400 Sobic007G152300--Sobic001G143400 Sobic007G152300--Sobic006G154000 Sobic007G152300--Sobic001G384700 Sobic010G168700 Sobic010G168700 Sobic007G152300--Sobic010G168700 Sobic002G050700 Sobic002G050700 Sobic007G152300--Sobic002G050700 Sobic009G185900 Sobic009G185900 Sobic007G152300--Sobic009G185900 Sobic001G379900 Sobic001G379900 Sobic007G152300--Sobic001G379900 Sobic009G146700 Sobic009G146700 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic005G199700--Sobic006G273600 Sobic003G010700 Sobic003G010700 Sobic005G199700--Sobic003G010700 Sobic005G199700--Sobic003G027100 Sobic010G014700 Sobic010G014700 Sobic005G199700--Sobic010G014700 Sobic004G003700--Sobic001G143400 Sobic007G209200 Sobic007G209200 Sobic004G003700--Sobic007G209200 Sobic004G003700--Sobic010G168700 Sobic007G147200 Sobic007G147200 Sobic004G003700--Sobic007G147200 Sobic006G221800 Sobic006G221800 Sobic004G003700--Sobic006G221800 Sobic009G047500 Sobic009G047500 Sobic004G003700--Sobic009G047500 Sobic001G101700 Sobic001G101700 Sobic004G003700--Sobic001G101700 Sobic004G003700--Sobic005G168400 Sobic008G138000 Sobic008G138000 Sobic004G003700--Sobic008G138000 Sobic005G168400--Sobic010G168700 Sobic005G168400--Sobic001G143400 Sobic005G168400--Sobic004G003700 Sobic003G319900 Sobic003G319900 Sobic005G168400--Sobic003G319900 Sobic001G393200 Sobic001G393200 Sobic005G168400--Sobic001G393200 Sobic005G168400--Sobic009G047500 Sobic005G168400--Sobic005G199700 Sobic005G168400--Sobic001G379900 Sobic005G168400--Sobic007G152300 Sobic002G216600 Sobic002G216600 Sobic001G384700--Sobic002G216600 Sobic001G079900 Sobic001G079900 Sobic001G384700--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic001G384700--Sobic009G141700 Sobic006G046600 Sobic006G046600 Sobic001G384700--Sobic006G046600 Sobic005G204100 Sobic005G204100 Sobic001G384700--Sobic005G204100 Sobic004G052800 Sobic004G052800 Sobic001G384700--Sobic004G052800 Sobic001G384700--Sobic005G168400 Sobic001G384700--Sobic001G379900 Sobic001G384700--Sobic001G434100
Octagon: transcription factors


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