Gene annotation
Transcriptome id Sobic.006G167900.1
Synonym Sb06g024360,ethylene response factor 66, SbERF66
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5YDE7
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF29
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G47230 : ethylene responsive element binding factor 5
RAP-DB (Rice) LOC_Os04g46250.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035951 , Zm00025a010335 , Zm00025a010338 , Zm00025a022855 , Zm00025a033320
Brachypodium KQK09018 , KQK19497 , KQJ83907
Barley HORVU3Hr1G030310.1 , HORVU6Hr1G062430.1 , HORVU1Hr1G055710.1 , HORVU1Hr1G055710.3
Wheat -
Populus -


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cDNA sequences
Sobic.006G167900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G181400 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed -
2 Sobic.010G197700 cytochrome P450, putative, expressed -
3 Sobic.001G278600 - -
4 Sobic.008G052500 receptor-like kinase, putative, expressed -
5 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.007G064250 - -
7 Sobic.003G137900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.008G065400 - -
9 Sobic.006G106700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
10 Sobic.010G101700 - -
11 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
12 Sobic.006G208100 maintain optimal Na+/K+ (PubmedID : 24325391)@Up-reguralion under drought(PubMedID : 24916767)@OsHKT1@4 - Na+ transporter, expressed -
13 Sobic.001G210250 - -
14 Sobic.010G253500 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
15 Sobic.001G164100 cytochrome P450, putative, expressed -
16 Sobic.003G266700 expressed protein -
17 Sobic.003G000600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY1, expressed -
18 Sobic.006G057733 - -
19 Sobic.005G051300 - -
20 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic006G167900 Sobic006G167900 Sobic006G181400 Sobic006G181400 Sobic006G167900--Sobic006G181400 Sobic010G197700 Sobic010G197700 Sobic006G167900--Sobic010G197700 Sobic001G278600 Sobic001G278600 Sobic006G167900--Sobic001G278600 Sobic008G052500 Sobic008G052500 Sobic006G167900--Sobic008G052500 Sobic003G374500 Sobic003G374500 Sobic006G167900--Sobic003G374500 Sobic007G064250 Sobic007G064250 Sobic006G167900--Sobic007G064250 Sobic003G137900 Sobic003G137900 Sobic006G167900--Sobic003G137900 Sobic008G065400 Sobic008G065400 Sobic006G167900--Sobic008G065400 Sobic006G106700 Sobic006G106700 Sobic006G167900--Sobic006G106700 Sobic006G181400--Sobic006G167900 Sobic006G181400--Sobic010G197700 Sobic006G181400--Sobic007G064250 Sobic006G181400--Sobic001G278600 Sobic006G181400--Sobic003G374500 Sobic003G121900 Sobic003G121900 Sobic006G181400--Sobic003G121900 Sobic006G181400--Sobic006G106700 Sobic003G266700 Sobic003G266700 Sobic006G181400--Sobic003G266700 Sobic006G181400--Sobic008G065400 Sobic010G197700--Sobic001G278600 Sobic010G197700--Sobic008G065400 Sobic010G197700--Sobic008G052500 Sobic010G054500 Sobic010G054500 Sobic010G197700--Sobic010G054500 Sobic001G140200 Sobic001G140200 Sobic010G197700--Sobic001G140200 Sobic010G197700--Sobic003G374500 Sobic010G197700--Sobic007G064250 Sobic010G197700--Sobic003G266700 Sobic008G065800 Sobic008G065800 Sobic010G197700--Sobic008G065800 Sobic001G278600--Sobic008G065400 Sobic010G101700 Sobic010G101700 Sobic001G278600--Sobic010G101700 Sobic001G278600--Sobic003G266700 Sobic001G278600--Sobic003G374500 Sobic003G366850 Sobic003G366850 Sobic001G278600--Sobic003G366850 Sobic009G159300 Sobic009G159300 Sobic001G278600--Sobic009G159300 Sobic004G121000 Sobic004G121000 Sobic001G278600--Sobic004G121000 Sobic003G351150 Sobic003G351150 Sobic001G278600--Sobic003G351150 Sobic002G171400 Sobic002G171400 Sobic001G278600--Sobic002G171400 Sobic008G052500--Sobic010G054500 Sobic008G052500--Sobic001G140200 Sobic002G325600 Sobic002G325600 Sobic008G052500--Sobic002G325600 Sobic005G016900 Sobic005G016900 Sobic008G052500--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic008G052500--Sobic007G143100 Sobic001G509400 Sobic001G509400 Sobic008G052500--Sobic001G509400 Sobic007G169600 Sobic007G169600 Sobic008G052500--Sobic007G169600 Sobic001G075101 Sobic001G075101 Sobic008G052500--Sobic001G075101 Sobic007G143200 Sobic007G143200 Sobic008G052500--Sobic007G143200 Sobic003G374500--Sobic008G065400 Sobic003G374500--Sobic001G278600 Sobic003G374500--Sobic003G366850 Sobic007G037301 Sobic007G037301 Sobic003G374500--Sobic007G037301 Sobic005G079700 Sobic005G079700 Sobic003G374500--Sobic005G079700 Sobic003G374500--Sobic001G140200 Sobic001G262900 Sobic001G262900 Sobic003G374500--Sobic001G262900 Sobic003G374500--Sobic003G266700 Sobic002G431200 Sobic002G431200 Sobic003G374500--Sobic002G431200 Sobic007G064250--Sobic008G065400 Sobic008G106400 Sobic008G106400 Sobic007G064250--Sobic008G106400 Sobic007G064250--Sobic008G052500 Sobic007G064250--Sobic003G266700 Sobic007G064250--Sobic010G101700 Sobic006G152400 Sobic006G152400 Sobic007G064250--Sobic006G152400 Sobic007G064250--Sobic001G278600 Sobic007G005000 Sobic007G005000 Sobic007G064250--Sobic007G005000 Sobic001G184500 Sobic001G184500 Sobic007G064250--Sobic001G184500 Sobic003G397400 Sobic003G397400 Sobic003G137900--Sobic003G397400 Sobic007G073750 Sobic007G073750 Sobic003G137900--Sobic007G073750 Sobic003G137900--Sobic005G016900 Sobic009G097300 Sobic009G097300 Sobic003G137900--Sobic009G097300 Sobic003G137900--Sobic008G052500 Sobic003G137900--Sobic002G325600 Sobic003G137900--Sobic007G143100 Sobic003G137900--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic003G137900--Sobic009G076700 Sobic008G065400--Sobic001G278600 Sobic008G065400--Sobic002G431200 Sobic008G065400--Sobic003G366850 Sobic008G065400--Sobic003G374500 Sobic008G065400--Sobic005G079700 Sobic008G065400--Sobic003G266700 Sobic008G065400--Sobic008G106400 Sobic008G065400--Sobic002G171400 Sobic003G429500 Sobic003G429500 Sobic008G065400--Sobic003G429500 Sobic006G106700--Sobic010G197700 Sobic004G267300 Sobic004G267300 Sobic006G106700--Sobic004G267300 Sobic006G106700--Sobic003G121900 Sobic006G106700--Sobic001G278600 Sobic006G106700--Sobic006G167900 Sobic006G106700--Sobic006G181400 Sobic005G051300 Sobic005G051300 Sobic006G106700--Sobic005G051300 Sobic007G080900 Sobic007G080900 Sobic006G106700--Sobic007G080900 Sobic002G281700 Sobic002G281700 Sobic006G106700--Sobic002G281700
Octagon: transcription factors


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