Gene annotation
Transcriptome id Sobic.006G181400.2
Synonym Polyphenol oxidase (PPO) 2, Sb06PPO2, Sb06g025580, Sb06PPO2;Polyphenol oxidase (PPO) 2
Functional annotation Polyphenol oxidas (PubMedID : 28818380)
"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Up-reguralion under drought (PubMedID : 24916767)
polyphenol oxidase, putative, expressed
UniProt A0A1Z5RF73
Pfam PF12142 PF00264 PF12143
Panther DB PTHR11474 PTHR11474:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004097; catechol oxidase activity GO:0016491oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g53300.1 : polyphenol oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a056786 , Zm00025a057062
Brachypodium KQK10142
Barley HORVU2Hr1G103000.6 , HORVU2Hr1G103000.7 , HORVU2Hr1G103000.4 , HORVU2Hr1G103000.5 , HORVU2Hr1G103000.2 , HORVU2Hr1G103000.3 , HORVU2Hr1G103000.1 , HORVU3Hr1G077790.1 , HORVU2Hr1G103000.8 , HORVU2Hr1G103000.9 , HORVU0Hr1G007090.1 , HORVU2Hr1G102950.1 , HORVU2Hr1G103040.2 , HORVU2Hr1G103040.3 , HORVU2Hr1G103040.1 , HORVU2Hr1G103040.4 , HORVU2Hr1G103040.5 , HORVU5Hr1G041740.2 , HORVU5Hr1G041740.1
Wheat TraesCS2B02G491100 , TraesCS2D02G468200 , TraesCS2A02G468200 , TraesCS2A02G468500 , TraesCS2B02G491400 , TraesCS2B02G491000 , TraesCS2D02G468600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G167900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
2 Sobic.010G197700 cytochrome P450, putative, expressed -
3 Sobic.007G064250 - -
4 Sobic.001G278600 - -
5 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.003G121900 - -
7 Sobic.006G106700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
8 Sobic.003G266700 expressed protein -
9 Sobic.008G065400 - -
10 Sobic.008G142000 expressed protein -
11 Sobic.008G052500 receptor-like kinase, putative, expressed -
12 Sobic.003G060300 endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
13 Sobic.010G229000 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
14 Sobic.004G200866 - -
15 Sobic.005G051300 - -
16 Sobic.004G204400 OsFBX309 - F-box domain containing protein, expressed -
17 Sobic.005G094200 resistance protein, putative, expressed -
18 Sobic.010G101700 - -
19 Sobic.006G152400 OsWAK111 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.004G132100 ATP binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G181400 Sobic006G181400 Sobic006G167900 Sobic006G167900 Sobic006G181400--Sobic006G167900 Sobic010G197700 Sobic010G197700 Sobic006G181400--Sobic010G197700 Sobic007G064250 Sobic007G064250 Sobic006G181400--Sobic007G064250 Sobic001G278600 Sobic001G278600 Sobic006G181400--Sobic001G278600 Sobic003G374500 Sobic003G374500 Sobic006G181400--Sobic003G374500 Sobic003G121900 Sobic003G121900 Sobic006G181400--Sobic003G121900 Sobic006G106700 Sobic006G106700 Sobic006G181400--Sobic006G106700 Sobic003G266700 Sobic003G266700 Sobic006G181400--Sobic003G266700 Sobic008G065400 Sobic008G065400 Sobic006G181400--Sobic008G065400 Sobic006G167900--Sobic006G181400 Sobic006G167900--Sobic010G197700 Sobic006G167900--Sobic001G278600 Sobic008G052500 Sobic008G052500 Sobic006G167900--Sobic008G052500 Sobic006G167900--Sobic003G374500 Sobic006G167900--Sobic007G064250 Sobic003G137900 Sobic003G137900 Sobic006G167900--Sobic003G137900 Sobic006G167900--Sobic008G065400 Sobic006G167900--Sobic006G106700 Sobic010G197700--Sobic001G278600 Sobic010G197700--Sobic008G065400 Sobic010G197700--Sobic008G052500 Sobic010G054500 Sobic010G054500 Sobic010G197700--Sobic010G054500 Sobic001G140200 Sobic001G140200 Sobic010G197700--Sobic001G140200 Sobic010G197700--Sobic003G374500 Sobic010G197700--Sobic007G064250 Sobic010G197700--Sobic003G266700 Sobic008G065800 Sobic008G065800 Sobic010G197700--Sobic008G065800 Sobic007G064250--Sobic008G065400 Sobic008G106400 Sobic008G106400 Sobic007G064250--Sobic008G106400 Sobic007G064250--Sobic008G052500 Sobic007G064250--Sobic003G266700 Sobic010G101700 Sobic010G101700 Sobic007G064250--Sobic010G101700 Sobic006G152400 Sobic006G152400 Sobic007G064250--Sobic006G152400 Sobic007G064250--Sobic001G278600 Sobic007G005000 Sobic007G005000 Sobic007G064250--Sobic007G005000 Sobic001G184500 Sobic001G184500 Sobic007G064250--Sobic001G184500 Sobic001G278600--Sobic008G065400 Sobic001G278600--Sobic010G101700 Sobic001G278600--Sobic003G266700 Sobic001G278600--Sobic003G374500 Sobic003G366850 Sobic003G366850 Sobic001G278600--Sobic003G366850 Sobic009G159300 Sobic009G159300 Sobic001G278600--Sobic009G159300 Sobic004G121000 Sobic004G121000 Sobic001G278600--Sobic004G121000 Sobic003G351150 Sobic003G351150 Sobic001G278600--Sobic003G351150 Sobic002G171400 Sobic002G171400 Sobic001G278600--Sobic002G171400 Sobic003G374500--Sobic008G065400 Sobic003G374500--Sobic001G278600 Sobic003G374500--Sobic003G366850 Sobic007G037301 Sobic007G037301 Sobic003G374500--Sobic007G037301 Sobic005G079700 Sobic005G079700 Sobic003G374500--Sobic005G079700 Sobic003G374500--Sobic001G140200 Sobic001G262900 Sobic001G262900 Sobic003G374500--Sobic001G262900 Sobic003G374500--Sobic003G266700 Sobic002G431200 Sobic002G431200 Sobic003G374500--Sobic002G431200 Sobic005G139800 Sobic005G139800 Sobic003G121900--Sobic005G139800 Sobic007G132600 Sobic007G132600 Sobic003G121900--Sobic007G132600 Sobic008G142000 Sobic008G142000 Sobic003G121900--Sobic008G142000 Sobic001G287301 Sobic001G287301 Sobic003G121900--Sobic001G287301 Sobic006G068400 Sobic006G068400 Sobic003G121900--Sobic006G068400 Sobic003G121900--Sobic001G278600 Sobic009G209800 Sobic009G209800 Sobic003G121900--Sobic009G209800 Sobic008G025900 Sobic008G025900 Sobic003G121900--Sobic008G025900 Sobic001G128800 Sobic001G128800 Sobic003G121900--Sobic001G128800 Sobic006G106700--Sobic010G197700 Sobic004G267300 Sobic004G267300 Sobic006G106700--Sobic004G267300 Sobic006G106700--Sobic003G121900 Sobic006G106700--Sobic001G278600 Sobic006G106700--Sobic006G167900 Sobic006G106700--Sobic006G181400 Sobic005G051300 Sobic005G051300 Sobic006G106700--Sobic005G051300 Sobic007G080900 Sobic007G080900 Sobic006G106700--Sobic007G080900 Sobic002G281700 Sobic002G281700 Sobic006G106700--Sobic002G281700 Sobic003G266700--Sobic008G065400 Sobic003G266700--Sobic001G278600 Sobic003G266700--Sobic004G121000 Sobic003G311200 Sobic003G311200 Sobic003G266700--Sobic003G311200 Sobic003G266700--Sobic003G366850 Sobic003G429500 Sobic003G429500 Sobic003G266700--Sobic003G429500 Sobic008G045600 Sobic008G045600 Sobic003G266700--Sobic008G045600 Sobic003G266700--Sobic010G101700 Sobic004G317600 Sobic004G317600 Sobic003G266700--Sobic004G317600 Sobic008G065400--Sobic001G278600 Sobic008G065400--Sobic002G431200 Sobic008G065400--Sobic003G366850 Sobic008G065400--Sobic003G374500 Sobic008G065400--Sobic005G079700 Sobic008G065400--Sobic003G266700 Sobic008G065400--Sobic008G106400 Sobic008G065400--Sobic002G171400 Sobic008G065400--Sobic003G429500
Octagon: transcription factors


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