Gene annotation
Transcriptome id Sobic.006G211000.1
Synonym Sb06g028160
Functional annotation transferase family protein, putative, expressed
UniProt C5YFN3
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT3G23840 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os04g52164.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a054872 , Zm00025a009832
Brachypodium KQJ84513
Barley HORVU2Hr1G099710.2 , HORVU2Hr1G099590.1 , HORVU2Hr1G099710.1 , HORVU2Hr1G099550.1 , HORVU2Hr1G099550.2
Wheat TraesCSU02G199300 , TraesCS2B02G446300 , TraesCS4A02G304000 , TraesCSU02G166000 , TraesCS2D02G424100 , TraesCS2A02G426000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G211000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G034500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.008G137901 - -
3 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
4 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
5 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.010G196400 expressed protein -
7 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
8 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.001G266200 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.001G221400 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
12 Sobic.010G164500 meiosis 5, putative, expressed -
13 Sobic.009G210900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
14 Sobic.003G421800 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.006G037300 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.006G003951 - -
17 Sobic.003G108000 expressed protein -
18 Sobic.001G036600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
19 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.002G363200 saccharopine dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic006G211000 Sobic006G211000 Sobic009G034500 Sobic009G034500 Sobic006G211000--Sobic009G034500 Sobic008G137901 Sobic008G137901 Sobic006G211000--Sobic008G137901 Sobic001G510200 Sobic001G510200 Sobic006G211000--Sobic001G510200 Sobic009G151000 Sobic009G151000 Sobic006G211000--Sobic009G151000 Sobic006G166800 Sobic006G166800 Sobic006G211000--Sobic006G166800 Sobic010G196400 Sobic010G196400 Sobic006G211000--Sobic010G196400 Sobic007G027200 Sobic007G027200 Sobic006G211000--Sobic007G027200 Sobic009G162800 Sobic009G162800 Sobic006G211000--Sobic009G162800 Sobic001G266200 Sobic001G266200 Sobic006G211000--Sobic001G266200 Sobic006G037300 Sobic006G037300 Sobic009G034500--Sobic006G037300 Sobic002G201000 Sobic002G201000 Sobic009G034500--Sobic002G201000 Sobic006G139300 Sobic006G139300 Sobic009G034500--Sobic006G139300 Sobic001G050300 Sobic001G050300 Sobic009G034500--Sobic001G050300 Sobic009G034500--Sobic006G211000 Sobic003G020300 Sobic003G020300 Sobic009G034500--Sobic003G020300 Sobic008G005600 Sobic008G005600 Sobic009G034500--Sobic008G005600 Sobic003G420201 Sobic003G420201 Sobic009G034500--Sobic003G420201 Sobic001G482300 Sobic001G482300 Sobic009G034500--Sobic001G482300 Sobic002G363200 Sobic002G363200 Sobic008G137901--Sobic002G363200 Sobic010G005900 Sobic010G005900 Sobic008G137901--Sobic010G005900 Sobic008G137901--Sobic001G510200 Sobic001G538000 Sobic001G538000 Sobic008G137901--Sobic001G538000 Sobic010G124600 Sobic010G124600 Sobic008G137901--Sobic010G124600 Sobic002G267100 Sobic002G267100 Sobic008G137901--Sobic002G267100 Sobic001G221400 Sobic001G221400 Sobic008G137901--Sobic001G221400 Sobic007G095000 Sobic007G095000 Sobic008G137901--Sobic007G095000 Sobic003G205700 Sobic003G205700 Sobic008G137901--Sobic003G205700 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic002G394700 Sobic002G394700 Sobic001G510200--Sobic002G394700 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic002G039400 Sobic002G039400 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200 Sobic001G275600 Sobic001G275600 Sobic009G151000--Sobic001G275600 Sobic008G173200 Sobic008G173200 Sobic009G151000--Sobic008G173200 Sobic003G153400 Sobic003G153400 Sobic009G151000--Sobic003G153400 Sobic009G151000--Sobic010G196400 Sobic003G108000 Sobic003G108000 Sobic009G151000--Sobic003G108000 Sobic001G307300 Sobic001G307300 Sobic009G151000--Sobic001G307300 Sobic006G001000 Sobic006G001000 Sobic009G151000--Sobic006G001000 Sobic001G336800 Sobic001G336800 Sobic009G151000--Sobic001G336800 Sobic009G070600 Sobic009G070600 Sobic009G151000--Sobic009G070600 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic003G352800 Sobic003G352800 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic009G241600 Sobic009G241600 Sobic006G166800--Sobic009G241600 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic010G196400--Sobic001G275600 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic010G199700 Sobic010G199700 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G162800--Sobic009G241600 Sobic001G266200--Sobic001G510200 Sobic010G231600 Sobic010G231600 Sobic001G266200--Sobic010G231600 Sobic001G266200--Sobic006G166800 Sobic001G266200--Sobic007G027200 Sobic001G266200--Sobic001G538000 Sobic001G266200--Sobic009G162800 Sobic010G200900 Sobic010G200900 Sobic001G266200--Sobic010G200900 Sobic001G266200--Sobic002G039400 Sobic001G266200--Sobic010G124600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.