Gene annotation
Transcriptome id Sobic.006G216400.1
Synonym SbSAUR45;small auxin up RNA, Sb06g028640, SbSAUR45, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
OsSAUR21 - Auxin-responsive SAUR gene family member, expressed
UniProt C5YG27
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF38
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G79130 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os04g52670.1 : OsSAUR21 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a057039
Brachypodium -
Barley HORVU2Hr1G098310.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G216400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G344600 BAG domain containing protein, expressed -
2 Sobic.006G211200 expressed protein -
3 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
4 Sobic.001G084900 expressed protein -
5 Sobic.004G333500 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
6 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
7 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
8 Sobic.004G196400 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1
9 Sobic.001G111000 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
10 Sobic.005G092800 expressed protein -
11 Sobic.009G159200 guanylyl cyclase, putative, expressed -
12 Sobic.001G014000 P21-Rho-binding domain containing protein, putative, expressed -
13 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
14 Sobic.009G117000 expressed protein -
15 Sobic.006G147000 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
16 Sobic.004G069200 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
17 Sobic.004G026400 expressed protein -
18 Sobic.009G055100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G070800 expressed protein -
20 Sobic.002G034800 - -


Gene co-expression network
sample Sobic006G216400 Sobic006G216400 Sobic003G344600 Sobic003G344600 Sobic006G216400--Sobic003G344600 Sobic006G211200 Sobic006G211200 Sobic006G216400--Sobic006G211200 Sobic006G052400 Sobic006G052400 Sobic006G216400--Sobic006G052400 Sobic001G084900 Sobic001G084900 Sobic006G216400--Sobic001G084900 Sobic004G333500 Sobic004G333500 Sobic006G216400--Sobic004G333500 Sobic006G149200 Sobic006G149200 Sobic006G216400--Sobic006G149200 Sobic009G165500 Sobic009G165500 Sobic006G216400--Sobic009G165500 Sobic004G196400 Sobic004G196400 Sobic006G216400--Sobic004G196400 Sobic001G111000 Sobic001G111000 Sobic006G216400--Sobic001G111000 Sobic003G249800 Sobic003G249800 Sobic003G344600--Sobic003G249800 Sobic001G009500 Sobic001G009500 Sobic003G344600--Sobic001G009500 Sobic003G429000 Sobic003G429000 Sobic003G344600--Sobic003G429000 Sobic009G180000 Sobic009G180000 Sobic003G344600--Sobic009G180000 Sobic001G054900 Sobic001G054900 Sobic003G344600--Sobic001G054900 Sobic002G282400 Sobic002G282400 Sobic003G344600--Sobic002G282400 Sobic002G335300 Sobic002G335300 Sobic003G344600--Sobic002G335300 Sobic002G330000 Sobic002G330000 Sobic003G344600--Sobic002G330000 Sobic010G237000 Sobic010G237000 Sobic003G344600--Sobic010G237000 Sobic006G147000 Sobic006G147000 Sobic006G211200--Sobic006G147000 Sobic003G321700 Sobic003G321700 Sobic006G211200--Sobic003G321700 Sobic007G190800 Sobic007G190800 Sobic006G211200--Sobic007G190800 Sobic007G019000 Sobic007G019000 Sobic006G211200--Sobic007G019000 Sobic004G322200 Sobic004G322200 Sobic006G211200--Sobic004G322200 Sobic010G259900 Sobic010G259900 Sobic006G211200--Sobic010G259900 Sobic007G212600 Sobic007G212600 Sobic006G211200--Sobic007G212600 Sobic001G016400 Sobic001G016400 Sobic006G211200--Sobic001G016400 Sobic003G322400 Sobic003G322400 Sobic006G211200--Sobic003G322400 Sobic008G058300 Sobic008G058300 Sobic006G052400--Sobic008G058300 Sobic001G058900 Sobic001G058900 Sobic006G052400--Sobic001G058900 Sobic009G050200 Sobic009G050200 Sobic006G052400--Sobic009G050200 Sobic001G096100 Sobic001G096100 Sobic006G052400--Sobic001G096100 Sobic006G115000 Sobic006G115000 Sobic006G052400--Sobic006G115000 Sobic001G225700 Sobic001G225700 Sobic006G052400--Sobic001G225700 Sobic003G442400 Sobic003G442400 Sobic006G052400--Sobic003G442400 Sobic003G018600 Sobic003G018600 Sobic006G052400--Sobic003G018600 Sobic009G117000 Sobic009G117000 Sobic006G052400--Sobic009G117000 Sobic010G106200 Sobic010G106200 Sobic001G084900--Sobic010G106200 Sobic001G084900--Sobic006G147000 Sobic001G084900--Sobic009G180000 Sobic010G153100 Sobic010G153100 Sobic001G084900--Sobic010G153100 Sobic002G190900 Sobic002G190900 Sobic001G084900--Sobic002G190900 Sobic003G155400 Sobic003G155400 Sobic001G084900--Sobic003G155400 Sobic003G072300 Sobic003G072300 Sobic001G084900--Sobic003G072300 Sobic002G081600 Sobic002G081600 Sobic001G084900--Sobic002G081600 Sobic002G187500 Sobic002G187500 Sobic001G084900--Sobic002G187500 Sobic004G333500--Sobic009G180000 Sobic004G333500--Sobic001G084900 Sobic003G215700 Sobic003G215700 Sobic004G333500--Sobic003G215700 Sobic007G018300 Sobic007G018300 Sobic004G333500--Sobic007G018300 Sobic006G083500 Sobic006G083500 Sobic004G333500--Sobic006G083500 Sobic001G483100 Sobic001G483100 Sobic004G333500--Sobic001G483100 Sobic001G533500 Sobic001G533500 Sobic004G333500--Sobic001G533500 Sobic001G537200 Sobic001G537200 Sobic004G333500--Sobic001G537200 Sobic010G204500 Sobic010G204500 Sobic004G333500--Sobic010G204500 Sobic006G149200--Sobic006G115000 Sobic002G286900 Sobic002G286900 Sobic006G149200--Sobic002G286900 Sobic006G149200--Sobic003G018600 Sobic003G073900 Sobic003G073900 Sobic006G149200--Sobic003G073900 Sobic004G217450 Sobic004G217450 Sobic006G149200--Sobic004G217450 Sobic003G150000 Sobic003G150000 Sobic006G149200--Sobic003G150000 Sobic006G231700 Sobic006G231700 Sobic006G149200--Sobic006G231700 Sobic005G110800 Sobic005G110800 Sobic006G149200--Sobic005G110800 Sobic006G159600 Sobic006G159600 Sobic006G149200--Sobic006G159600 Sobic003G084300 Sobic003G084300 Sobic009G165500--Sobic003G084300 Sobic001G505000 Sobic001G505000 Sobic009G165500--Sobic001G505000 Sobic009G165500--Sobic006G149200 Sobic010G238800 Sobic010G238800 Sobic009G165500--Sobic010G238800 Sobic010G054200 Sobic010G054200 Sobic009G165500--Sobic010G054200 Sobic001G429000 Sobic001G429000 Sobic009G165500--Sobic001G429000 Sobic008G135000 Sobic008G135000 Sobic009G165500--Sobic008G135000 Sobic001G412500 Sobic001G412500 Sobic009G165500--Sobic001G412500 Sobic006G201500 Sobic006G201500 Sobic009G165500--Sobic006G201500 Sobic004G196400--Sobic006G147000 Sobic004G196400--Sobic001G533500 Sobic004G196400--Sobic006G211200 Sobic004G196400--Sobic007G019000 Sobic007G178600 Sobic007G178600 Sobic004G196400--Sobic007G178600 Sobic004G196400--Sobic001G537200 Sobic004G252100 Sobic004G252100 Sobic004G196400--Sobic004G252100 Sobic004G196400--Sobic007G190800 Sobic004G196400--Sobic002G286900 Sobic006G057200 Sobic006G057200 Sobic001G111000--Sobic006G057200 Sobic003G016100 Sobic003G016100 Sobic001G111000--Sobic003G016100 Sobic004G042000 Sobic004G042000 Sobic001G111000--Sobic004G042000 Sobic001G361600 Sobic001G361600 Sobic001G111000--Sobic001G361600 Sobic003G219800 Sobic003G219800 Sobic001G111000--Sobic003G219800 Sobic005G142300 Sobic005G142300 Sobic001G111000--Sobic005G142300 Sobic003G264600 Sobic003G264600 Sobic001G111000--Sobic003G264600 Sobic003G160700 Sobic003G160700 Sobic001G111000--Sobic003G160700 Sobic003G078200 Sobic003G078200 Sobic001G111000--Sobic003G078200
Octagon: transcription factors


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