Gene annotation
Transcriptome id Sobic.006G234300.1
Synonym Sb06g030180
Functional annotation expressed protein
UniProt A0A1B6PNH7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g54590.1 : expressed protein
MaizeGDB (Corn) Zm00025a009605
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G234300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G015100 expressed protein -
2 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
3 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
4 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
5 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
6 Sobic.003G129200 argonaute, putative, expressed -
7 Sobic.001G459300 - -
8 Sobic.003G300000 expressed protein -
9 Sobic.002G239101 - -
10 Sobic.005G070101 - -
11 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
12 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
13 Sobic.005G070700 - -
14 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
15 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.001G274300 GASR1 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative -
17 Sobic.006G134700 endoglucanase, putative, expressed -
18 Sobic.002G078900 agenet domain containing protein, expressed -
19 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
20 Sobic.001G235200 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic006G234300 Sobic006G234300 Sobic006G015100 Sobic006G015100 Sobic006G234300--Sobic006G015100 Sobic003G092300 Sobic003G092300 Sobic006G234300--Sobic003G092300 Sobic001G106500 Sobic001G106500 Sobic006G234300--Sobic001G106500 Sobic001G459400 Sobic001G459400 Sobic006G234300--Sobic001G459400 Sobic010G183800 Sobic010G183800 Sobic006G234300--Sobic010G183800 Sobic003G129200 Sobic003G129200 Sobic006G234300--Sobic003G129200 Sobic001G459300 Sobic001G459300 Sobic006G234300--Sobic001G459300 Sobic003G300000 Sobic003G300000 Sobic006G234300--Sobic003G300000 Sobic002G239101 Sobic002G239101 Sobic006G234300--Sobic002G239101 Sobic006G015100--Sobic001G459400 Sobic006G112300 Sobic006G112300 Sobic006G015100--Sobic006G112300 Sobic006G015100--Sobic003G092300 Sobic006G015100--Sobic010G183800 Sobic001G274300 Sobic001G274300 Sobic006G015100--Sobic001G274300 Sobic006G015100--Sobic001G459300 Sobic006G015100--Sobic003G300000 Sobic006G015100--Sobic001G106500 Sobic009G075500 Sobic009G075500 Sobic006G015100--Sobic009G075500 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G092300--Sobic003G300000 Sobic010G048600 Sobic010G048600 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic001G158100 Sobic001G158100 Sobic003G092300--Sobic001G158100 Sobic005G070700 Sobic005G070700 Sobic003G092300--Sobic005G070700 Sobic001G106500--Sobic001G459300 Sobic001G106500--Sobic010G048600 Sobic001G106500--Sobic003G092300 Sobic001G456000 Sobic001G456000 Sobic001G106500--Sobic001G456000 Sobic001G106500--Sobic005G070700 Sobic003G046400 Sobic003G046400 Sobic001G106500--Sobic003G046400 Sobic002G078900 Sobic002G078900 Sobic001G106500--Sobic002G078900 Sobic001G106500--Sobic001G459400 Sobic001G106500--Sobic010G183800 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic009G063700 Sobic009G063700 Sobic001G459400--Sobic009G063700 Sobic001G459400--Sobic006G015100 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic010G183800--Sobic009G063700 Sobic001G071600 Sobic001G071600 Sobic010G183800--Sobic001G071600 Sobic010G183800--Sobic001G158100 Sobic010G183800--Sobic001G106500 Sobic003G374100 Sobic003G374100 Sobic003G129200--Sobic003G374100 Sobic004G234600 Sobic004G234600 Sobic003G129200--Sobic004G234600 Sobic008G137700 Sobic008G137700 Sobic003G129200--Sobic008G137700 Sobic001G137800 Sobic001G137800 Sobic003G129200--Sobic001G137800 Sobic003G088600 Sobic003G088600 Sobic003G129200--Sobic003G088600 Sobic002G053350 Sobic002G053350 Sobic003G129200--Sobic002G053350 Sobic003G129200--Sobic002G239101 Sobic003G295100 Sobic003G295100 Sobic003G129200--Sobic003G295100 Sobic001G235200 Sobic001G235200 Sobic003G129200--Sobic001G235200 Sobic001G459300--Sobic005G070700 Sobic001G459300--Sobic010G048600 Sobic001G459300--Sobic001G459400 Sobic001G459300--Sobic001G106500 Sobic001G459300--Sobic001G274300 Sobic001G459300--Sobic001G456000 Sobic001G459300--Sobic003G092300 Sobic001G459300--Sobic002G078900 Sobic001G459300--Sobic010G183800 Sobic003G300000--Sobic010G183800 Sobic003G300000--Sobic001G459400 Sobic003G300000--Sobic003G092300 Sobic003G300000--Sobic002G078900 Sobic003G300000--Sobic009G063700 Sobic003G300000--Sobic009G075500 Sobic006G271600 Sobic006G271600 Sobic003G300000--Sobic006G271600 Sobic004G281000 Sobic004G281000 Sobic003G300000--Sobic004G281000 Sobic001G419500 Sobic001G419500 Sobic003G300000--Sobic001G419500 Sobic002G159000 Sobic002G159000 Sobic002G239101--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic002G239101--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic002G239101--Sobic005G070101 Sobic006G134700 Sobic006G134700 Sobic002G239101--Sobic006G134700 Sobic006G213900 Sobic006G213900 Sobic002G239101--Sobic006G213900 Sobic002G239101--Sobic001G235200 Sobic002G239101--Sobic001G459400 Sobic002G239101--Sobic009G075500 Sobic002G239101--Sobic009G063700
Octagon: transcription factors


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