Gene annotation
Transcriptome id Sobic.006G263200.3,Sobic.006G263200.1,Sobic.006G263200.2,Sobic.006G263200.4
Synonym
Functional annotation expressed protein
UniProt A0A1B6PP31 , A0A1B6PP08 , A0A1B6PP15 , A0A1B6PP03
Pfam PF12579
Panther DB PTHR14000 PTHR14000:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60670 : Protein of unknown function (DUF3755)
RAP-DB (Rice) LOC_Os04g57700.1,LOC_Os04g57700.2,LOC_Os04g57700.3 : expressed protein
MaizeGDB (Corn) Zm00025a009347 , Zm00025a057359
Brachypodium -
Barley HORVU2Hr1G120580.2 , HORVU2Hr1G120580.4 , HORVU2Hr1G120580.1 , HORVU2Hr1G120580.3
Wheat TraesCS2A02G550900 , TraesCS2A02G550900 , TraesCS2A02G550900 , TraesCS2A02G550900 , TraesCS2A02G550900 , TraesCS2B02G581700 , TraesCS2B02G581700 , TraesCS2B02G581700 , TraesCS2D02G552000 , TraesCS2D02G552000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G255700 plant-specific domain TIGR01589 family protein, putative, expressed -
2 Sobic.008G147300 calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
3 Sobic.001G067200 expressed protein -
4 Sobic.002G233900 AGAP005770-PA, putative, expressed -
5 Sobic.006G262400 phytosulfokine receptor precursor, putative, expressed -
6 Sobic.001G203400 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
7 Sobic.002G409600 protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.002G161800 Myb-like DNA-binding domain containing protein, putative, expressed -
9 Sobic.006G274600 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
10 Sobic.002G355000 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@WRKY87, expressed -
11 Sobic.003G181800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
13 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
14 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
15 Sobic.003G101500 dnaJ domain containing protein, expressed -
16 Sobic.008G029500 expressed protein -
17 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
18 Sobic.003G308200 expressed protein -
19 Sobic.004G039200 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
20 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22


Gene co-expression network
sample Sobic006G263200 Sobic006G263200 Sobic010G255700 Sobic010G255700 Sobic006G263200--Sobic010G255700 Sobic008G147300 Sobic008G147300 Sobic006G263200--Sobic008G147300 Sobic001G067200 Sobic001G067200 Sobic006G263200--Sobic001G067200 Sobic002G233900 Sobic002G233900 Sobic006G263200--Sobic002G233900 Sobic006G262400 Sobic006G262400 Sobic006G263200--Sobic006G262400 Sobic001G203400 Sobic001G203400 Sobic006G263200--Sobic001G203400 Sobic002G409600 Sobic002G409600 Sobic006G263200--Sobic002G409600 Sobic002G161800 Sobic002G161800 Sobic006G263200--Sobic002G161800 Sobic006G274600 Sobic006G274600 Sobic006G263200--Sobic006G274600 Sobic006G105400 Sobic006G105400 Sobic010G255700--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic010G255700--Sobic001G318432 Sobic006G048600 Sobic006G048600 Sobic010G255700--Sobic006G048600 Sobic009G228100 Sobic009G228100 Sobic010G255700--Sobic009G228100 Sobic010G255700--Sobic006G274600 Sobic004G258700 Sobic004G258700 Sobic010G255700--Sobic004G258700 Sobic006G048500 Sobic006G048500 Sobic010G255700--Sobic006G048500 Sobic005G144400 Sobic005G144400 Sobic010G255700--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic010G255700--Sobic003G148000 Sobic001G102700 Sobic001G102700 Sobic008G147300--Sobic001G102700 Sobic008G002000 Sobic008G002000 Sobic008G147300--Sobic008G002000 Sobic006G165000 Sobic006G165000 Sobic008G147300--Sobic006G165000 Sobic001G427300 Sobic001G427300 Sobic008G147300--Sobic001G427300 Sobic003G220200 Sobic003G220200 Sobic008G147300--Sobic003G220200 Sobic001G486300 Sobic001G486300 Sobic008G147300--Sobic001G486300 Sobic001G205200 Sobic001G205200 Sobic008G147300--Sobic001G205200 Sobic003G084900 Sobic003G084900 Sobic008G147300--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic008G147300--Sobic010G028800 Sobic001G067200--Sobic001G427300 Sobic001G297500 Sobic001G297500 Sobic001G067200--Sobic001G297500 Sobic010G223700 Sobic010G223700 Sobic001G067200--Sobic010G223700 Sobic001G067200--Sobic003G220200 Sobic001G067200--Sobic010G255700 Sobic004G164400 Sobic004G164400 Sobic001G067200--Sobic004G164400 Sobic001G067200--Sobic001G486300 Sobic007G145200 Sobic007G145200 Sobic001G067200--Sobic007G145200 Sobic001G067200--Sobic006G105400 Sobic003G153000 Sobic003G153000 Sobic002G233900--Sobic003G153000 Sobic008G047700 Sobic008G047700 Sobic002G233900--Sobic008G047700 Sobic009G260500 Sobic009G260500 Sobic002G233900--Sobic009G260500 Sobic003G023400 Sobic003G023400 Sobic002G233900--Sobic003G023400 Sobic002G402600 Sobic002G402600 Sobic002G233900--Sobic002G402600 Sobic010G145800 Sobic010G145800 Sobic002G233900--Sobic010G145800 Sobic003G173950 Sobic003G173950 Sobic002G233900--Sobic003G173950 Sobic003G101500 Sobic003G101500 Sobic002G233900--Sobic003G101500 Sobic010G096000 Sobic010G096000 Sobic002G233900--Sobic010G096000 Sobic006G262400--Sobic003G101500 Sobic001G076400 Sobic001G076400 Sobic006G262400--Sobic001G076400 Sobic006G262400--Sobic002G233900 Sobic001G332500 Sobic001G332500 Sobic006G262400--Sobic001G332500 Sobic002G167800 Sobic002G167800 Sobic006G262400--Sobic002G167800 Sobic010G016900 Sobic010G016900 Sobic006G262400--Sobic010G016900 Sobic006G262400--Sobic006G263200 Sobic001G501800 Sobic001G501800 Sobic006G262400--Sobic001G501800 Sobic002G355000 Sobic002G355000 Sobic006G262400--Sobic002G355000 Sobic005G187300 Sobic005G187300 Sobic001G203400--Sobic005G187300 Sobic001G085600 Sobic001G085600 Sobic001G203400--Sobic001G085600 Sobic004G023100 Sobic004G023100 Sobic001G203400--Sobic004G023100 Sobic010G094900 Sobic010G094900 Sobic001G203400--Sobic010G094900 Sobic001G261545 Sobic001G261545 Sobic001G203400--Sobic001G261545 Sobic003G196300 Sobic003G196300 Sobic001G203400--Sobic003G196300 Sobic006G219600 Sobic006G219600 Sobic001G203400--Sobic006G219600 Sobic005G059800 Sobic005G059800 Sobic001G203400--Sobic005G059800 Sobic010G032900 Sobic010G032900 Sobic001G203400--Sobic010G032900 Sobic002G409600--Sobic001G486300 Sobic005G023900 Sobic005G023900 Sobic002G409600--Sobic005G023900 Sobic009G134500 Sobic009G134500 Sobic002G409600--Sobic009G134500 Sobic006G246900 Sobic006G246900 Sobic002G409600--Sobic006G246900 Sobic001G420200 Sobic001G420200 Sobic002G409600--Sobic001G420200 Sobic007G011400 Sobic007G011400 Sobic002G409600--Sobic007G011400 Sobic003G268300 Sobic003G268300 Sobic002G409600--Sobic003G268300 Sobic001G413500 Sobic001G413500 Sobic002G409600--Sobic001G413500 Sobic003G200200 Sobic003G200200 Sobic002G409600--Sobic003G200200 Sobic001G392300 Sobic001G392300 Sobic002G161800--Sobic001G392300 Sobic001G080700 Sobic001G080700 Sobic002G161800--Sobic001G080700 Sobic008G179700 Sobic008G179700 Sobic002G161800--Sobic008G179700 Sobic010G251000 Sobic010G251000 Sobic002G161800--Sobic010G251000 Sobic001G281600 Sobic001G281600 Sobic002G161800--Sobic001G281600 Sobic006G008600 Sobic006G008600 Sobic002G161800--Sobic006G008600 Sobic002G054300 Sobic002G054300 Sobic002G161800--Sobic002G054300 Sobic008G047800 Sobic008G047800 Sobic002G161800--Sobic008G047800 Sobic002G161800--Sobic001G332500 Sobic008G067600 Sobic008G067600 Sobic006G274600--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic006G274600--Sobic009G065100 Sobic006G274600--Sobic004G164400 Sobic006G274600--Sobic010G255700 Sobic004G039200 Sobic004G039200 Sobic006G274600--Sobic004G039200 Sobic004G084300 Sobic004G084300 Sobic006G274600--Sobic004G084300 Sobic007G161000 Sobic007G161000 Sobic006G274600--Sobic007G161000 Sobic006G274600--Sobic006G105400 Sobic002G320500 Sobic002G320500 Sobic006G274600--Sobic002G320500
Octagon: transcription factors


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