Gene annotation
Transcriptome id Sobic.006G277100.1
Synonym Sb06g033810
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt A0A1B6PPB2
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G25270 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os04g59120.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a010506 , Zm00025a010513
Brachypodium PNT62206 , KQJ85436
Barley HORVU2Hr1G124740.4 , HORVU2Hr1G124740.2 , HORVU2Hr1G124740.3 , HORVU2Hr1G124740.1 , HORVU7Hr1G019700.4 , HORVU7Hr1G019700.5 , HORVU7Hr1G019700.6 , HORVU7Hr1G019700.7 , HORVU7Hr1G019700.1 , HORVU7Hr1G019700.2 , HORVU7Hr1G019700.3 , HORVU7Hr1G019700.8
Wheat TraesCS4B02G086600 , TraesCS7D02G082900 , TraesCS2B02G611600 , TraesCS4A02G386700 , TraesCS2D02G586500 , TraesCS7A02G087800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G155400 expressed protein -
2 Sobic.008G116600 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed -
3 Sobic.008G118300 expressed protein -
4 Sobic.005G092301 - -
5 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
6 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
8 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
9 Sobic.001G418600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
10 Sobic.010G106601 - K09422: transcription factor MYB, plant
11 Sobic.002G037600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G318700 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
13 Sobic.006G215950 - -
14 Sobic.006G208200 GHMP kinases ATP-binding protein, putative, expressed K18677: galacturonokinase
15 Sobic.009G023700 ABC transporter, membrane-spanning/permease subunit, putative, expressed K02069: putative ABC transport system permease protein
16 Sobic.003G062101 - -
17 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
18 Sobic.003G363400 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
19 Sobic.004G033200 expressed protein -
20 Sobic.004G058600 aldehyde dehydrogenase, putative, expressed K17761: succinate-semialdehyde dehydrogenase, mitochondrial


Gene co-expression network
sample Sobic006G277100 Sobic006G277100 Sobic004G155400 Sobic004G155400 Sobic006G277100--Sobic004G155400 Sobic008G116600 Sobic008G116600 Sobic006G277100--Sobic008G116600 Sobic008G118300 Sobic008G118300 Sobic006G277100--Sobic008G118300 Sobic005G092301 Sobic005G092301 Sobic006G277100--Sobic005G092301 Sobic001G294600 Sobic001G294600 Sobic006G277100--Sobic001G294600 Sobic004G155300 Sobic004G155300 Sobic006G277100--Sobic004G155300 Sobic004G353500 Sobic004G353500 Sobic006G277100--Sobic004G353500 Sobic004G066500 Sobic004G066500 Sobic006G277100--Sobic004G066500 Sobic001G418600 Sobic001G418600 Sobic006G277100--Sobic001G418600 Sobic004G155400--Sobic006G277100 Sobic002G037600 Sobic002G037600 Sobic004G155400--Sobic002G037600 Sobic004G155400--Sobic008G118300 Sobic006G208200 Sobic006G208200 Sobic004G155400--Sobic006G208200 Sobic008G017700 Sobic008G017700 Sobic004G155400--Sobic008G017700 Sobic004G155400--Sobic005G092301 Sobic004G155400--Sobic004G353500 Sobic003G294900 Sobic003G294900 Sobic004G155400--Sobic003G294900 Sobic004G215200 Sobic004G215200 Sobic004G155400--Sobic004G215200 Sobic004G033200 Sobic004G033200 Sobic008G116600--Sobic004G033200 Sobic006G212900 Sobic006G212900 Sobic008G116600--Sobic006G212900 Sobic002G332200 Sobic002G332200 Sobic008G116600--Sobic002G332200 Sobic002G385300 Sobic002G385300 Sobic008G116600--Sobic002G385300 Sobic009G195700 Sobic009G195700 Sobic008G116600--Sobic009G195700 Sobic004G058600 Sobic004G058600 Sobic008G116600--Sobic004G058600 Sobic008G116600--Sobic004G066500 Sobic003G126800 Sobic003G126800 Sobic008G116600--Sobic003G126800 Sobic003G200600 Sobic003G200600 Sobic008G116600--Sobic003G200600 Sobic001G286100 Sobic001G286100 Sobic008G118300--Sobic001G286100 Sobic002G304400 Sobic002G304400 Sobic008G118300--Sobic002G304400 Sobic008G118300--Sobic004G353500 Sobic008G118300--Sobic008G017700 Sobic004G160800 Sobic004G160800 Sobic008G118300--Sobic004G160800 Sobic010G002800 Sobic010G002800 Sobic008G118300--Sobic010G002800 Sobic003G418400 Sobic003G418400 Sobic008G118300--Sobic003G418400 Sobic008G118300--Sobic002G037600 Sobic006G271000 Sobic006G271000 Sobic008G118300--Sobic006G271000 Sobic003G275400 Sobic003G275400 Sobic005G092301--Sobic003G275400 Sobic008G191700 Sobic008G191700 Sobic005G092301--Sobic008G191700 Sobic010G211200 Sobic010G211200 Sobic005G092301--Sobic010G211200 Sobic008G141900 Sobic008G141900 Sobic005G092301--Sobic008G141900 Sobic004G222150 Sobic004G222150 Sobic005G092301--Sobic004G222150 Sobic002G064800 Sobic002G064800 Sobic005G092301--Sobic002G064800 Sobic009G241900 Sobic009G241900 Sobic005G092301--Sobic009G241900 Sobic005G212201 Sobic005G212201 Sobic005G092301--Sobic005G212201 Sobic009G168200 Sobic009G168200 Sobic005G092301--Sobic009G168200 Sobic003G358200 Sobic003G358200 Sobic001G294600--Sobic003G358200 Sobic003G252900 Sobic003G252900 Sobic001G294600--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G294600--Sobic008G058700 Sobic006G107400 Sobic006G107400 Sobic001G294600--Sobic006G107400 Sobic005G084900 Sobic005G084900 Sobic001G294600--Sobic005G084900 Sobic001G067000 Sobic001G067000 Sobic001G294600--Sobic001G067000 Sobic001G168500 Sobic001G168500 Sobic001G294600--Sobic001G168500 Sobic001G379000 Sobic001G379000 Sobic001G294600--Sobic001G379000 Sobic006G164000 Sobic006G164000 Sobic001G294600--Sobic006G164000 Sobic003G304500 Sobic003G304500 Sobic004G155300--Sobic003G304500 Sobic009G025100 Sobic009G025100 Sobic004G155300--Sobic009G025100 Sobic004G028800 Sobic004G028800 Sobic004G155300--Sobic004G028800 Sobic004G318400 Sobic004G318400 Sobic004G155300--Sobic004G318400 Sobic004G274500 Sobic004G274500 Sobic004G155300--Sobic004G274500 Sobic006G244500 Sobic006G244500 Sobic004G155300--Sobic006G244500 Sobic001G170500 Sobic001G170500 Sobic004G155300--Sobic001G170500 Sobic004G196800 Sobic004G196800 Sobic004G155300--Sobic004G196800 Sobic007G018000 Sobic007G018000 Sobic004G155300--Sobic007G018000 Sobic004G353500--Sobic003G294900 Sobic004G353500--Sobic008G118300 Sobic005G044300 Sobic005G044300 Sobic004G353500--Sobic005G044300 Sobic007G012900 Sobic007G012900 Sobic004G353500--Sobic007G012900 Sobic004G353500--Sobic004G160800 Sobic004G353500--Sobic001G286100 Sobic004G353500--Sobic002G037600 Sobic001G203800 Sobic001G203800 Sobic004G353500--Sobic001G203800 Sobic002G186500 Sobic002G186500 Sobic004G353500--Sobic002G186500 Sobic008G191850 Sobic008G191850 Sobic004G066500--Sobic008G191850 Sobic007G053100 Sobic007G053100 Sobic004G066500--Sobic007G053100 Sobic004G066500--Sobic004G033200 Sobic003G427300 Sobic003G427300 Sobic004G066500--Sobic003G427300 Sobic010G024600 Sobic010G024600 Sobic004G066500--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic004G066500--Sobic003G098300 Sobic002G266300 Sobic002G266300 Sobic004G066500--Sobic002G266300 Sobic001G044300 Sobic001G044300 Sobic004G066500--Sobic001G044300 Sobic001G508200 Sobic001G508200 Sobic004G066500--Sobic001G508200 Sobic004G083600 Sobic004G083600 Sobic001G418600--Sobic004G083600 Sobic002G185300 Sobic002G185300 Sobic001G418600--Sobic002G185300 Sobic003G281600 Sobic003G281600 Sobic001G418600--Sobic003G281600 Sobic001G206300 Sobic001G206300 Sobic001G418600--Sobic001G206300 Sobic003G039400 Sobic003G039400 Sobic001G418600--Sobic003G039400 Sobic003G409800 Sobic003G409800 Sobic001G418600--Sobic003G409800 Sobic003G331700 Sobic003G331700 Sobic001G418600--Sobic003G331700 Sobic007G180300 Sobic007G180300 Sobic001G418600--Sobic007G180300 Sobic005G061033 Sobic005G061033 Sobic001G418600--Sobic005G061033
Octagon: transcription factors


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