Gene annotation
Transcriptome id Sobic.009G023700.1
Synonym Sb09g002000, ALS3
Functional annotation ABC transporter, membrane-spanning/permease subunit, putative, expressed
UniProt C5YZ12
Pfam PF03649
Panther DB PTHR30028 PTHR30028:SF0
NCBI CDD -
KEGG Orthology K02069; putative ABC transport system permease protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37330 : aluminum sensitive 3
RAP-DB (Rice) LOC_Os05g02750.1 : ABC transporter, membrane-spanning/permease subunit, putative, expressed
MaizeGDB (Corn) Zm00025a038215
Brachypodium KQK07796
Barley -
Wheat TraesCS1A02G051800 , TraesCS1D02G053800 , TraesCS1B02G068600
Populus -


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cDNA sequences
Sobic.009G023700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
3 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
4 Sobic.002G385300 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.001G120400 phospholipase A2, putative, expressed K01047: PLA2G, secretory phospholipase A2
6 Sobic.001G385900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@stress responsive protein, putative, expressed -
7 Sobic.009G028100 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
8 Sobic.003G039200 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
9 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
10 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.001G285300 expressed protein -
12 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
13 Sobic.002G091000 - -
14 Sobic.002G238500 AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
16 Sobic.004G033200 expressed protein -
17 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
18 Sobic.006G277100 auxin-induced protein 5NG4, putative, expressed -
19 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
20 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase


Gene co-expression network
sample Sobic009G023700 Sobic009G023700 Sobic003G084200 Sobic003G084200 Sobic009G023700--Sobic003G084200 Sobic003G126800 Sobic003G126800 Sobic009G023700--Sobic003G126800 Sobic003G252900 Sobic003G252900 Sobic009G023700--Sobic003G252900 Sobic002G385300 Sobic002G385300 Sobic009G023700--Sobic002G385300 Sobic001G120400 Sobic001G120400 Sobic009G023700--Sobic001G120400 Sobic001G385900 Sobic001G385900 Sobic009G023700--Sobic001G385900 Sobic009G028100 Sobic009G028100 Sobic009G023700--Sobic009G028100 Sobic003G039200 Sobic003G039200 Sobic009G023700--Sobic003G039200 Sobic001G205800 Sobic001G205800 Sobic009G023700--Sobic001G205800 Sobic001G104500 Sobic001G104500 Sobic003G084200--Sobic001G104500 Sobic007G050800 Sobic007G050800 Sobic003G084200--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic003G084200--Sobic006G275500 Sobic005G157300 Sobic005G157300 Sobic003G084200--Sobic005G157300 Sobic002G168000 Sobic002G168000 Sobic003G084200--Sobic002G168000 Sobic007G187700 Sobic007G187700 Sobic003G084200--Sobic007G187700 Sobic003G244000 Sobic003G244000 Sobic003G084200--Sobic003G244000 Sobic009G002200 Sobic009G002200 Sobic003G084200--Sobic009G002200 Sobic001G456400 Sobic001G456400 Sobic003G084200--Sobic001G456400 Sobic008G058700 Sobic008G058700 Sobic003G126800--Sobic008G058700 Sobic003G126800--Sobic003G252900 Sobic010G088300 Sobic010G088300 Sobic003G126800--Sobic010G088300 Sobic003G031200 Sobic003G031200 Sobic003G126800--Sobic003G031200 Sobic009G070200 Sobic009G070200 Sobic003G126800--Sobic009G070200 Sobic004G297300 Sobic004G297300 Sobic003G126800--Sobic004G297300 Sobic003G358300 Sobic003G358300 Sobic003G126800--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic003G126800--Sobic001G066700 Sobic003G126800--Sobic003G039200 Sobic003G252900--Sobic008G058700 Sobic003G312400 Sobic003G312400 Sobic003G252900--Sobic003G312400 Sobic003G252900--Sobic003G126800 Sobic003G319000 Sobic003G319000 Sobic003G252900--Sobic003G319000 Sobic003G410400 Sobic003G410400 Sobic003G252900--Sobic003G410400 Sobic001G294600 Sobic001G294600 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic003G252900--Sobic010G088300 Sobic002G390400 Sobic002G390400 Sobic002G385300--Sobic002G390400 Sobic002G252900 Sobic002G252900 Sobic002G385300--Sobic002G252900 Sobic008G111700 Sobic008G111700 Sobic002G385300--Sobic008G111700 Sobic008G116600 Sobic008G116600 Sobic002G385300--Sobic008G116600 Sobic001G498400 Sobic001G498400 Sobic002G385300--Sobic001G498400 Sobic009G030400 Sobic009G030400 Sobic002G385300--Sobic009G030400 Sobic006G261100 Sobic006G261100 Sobic002G385300--Sobic006G261100 Sobic001G135500 Sobic001G135500 Sobic002G385300--Sobic001G135500 Sobic002G062500 Sobic002G062500 Sobic002G385300--Sobic002G062500 Sobic006G263400 Sobic006G263400 Sobic001G120400--Sobic006G263400 Sobic010G079100 Sobic010G079100 Sobic001G120400--Sobic010G079100 Sobic001G507000 Sobic001G507000 Sobic001G120400--Sobic001G507000 Sobic010G177100 Sobic010G177100 Sobic001G120400--Sobic010G177100 Sobic005G068800 Sobic005G068800 Sobic001G120400--Sobic005G068800 Sobic001G120400--Sobic003G084200 Sobic009G109300 Sobic009G109300 Sobic001G120400--Sobic009G109300 Sobic001G468500 Sobic001G468500 Sobic001G120400--Sobic001G468500 Sobic006G120600 Sobic006G120600 Sobic001G120400--Sobic006G120600 Sobic001G385900--Sobic001G205800 Sobic008G170500 Sobic008G170500 Sobic001G385900--Sobic008G170500 Sobic010G164400 Sobic010G164400 Sobic001G385900--Sobic010G164400 Sobic002G374650 Sobic002G374650 Sobic001G385900--Sobic002G374650 Sobic010G221800 Sobic010G221800 Sobic001G385900--Sobic010G221800 Sobic004G108100 Sobic004G108100 Sobic001G385900--Sobic004G108100 Sobic003G300900 Sobic003G300900 Sobic001G385900--Sobic003G300900 Sobic002G389100 Sobic002G389100 Sobic001G385900--Sobic002G389100 Sobic002G416500 Sobic002G416500 Sobic001G385900--Sobic002G416500 Sobic002G367200 Sobic002G367200 Sobic009G028100--Sobic002G367200 Sobic003G147500 Sobic003G147500 Sobic009G028100--Sobic003G147500 Sobic009G012600 Sobic009G012600 Sobic009G028100--Sobic009G012600 Sobic001G460100 Sobic001G460100 Sobic009G028100--Sobic001G460100 Sobic002G238500 Sobic002G238500 Sobic009G028100--Sobic002G238500 Sobic003G122800 Sobic003G122800 Sobic009G028100--Sobic003G122800 Sobic009G028100--Sobic007G050800 Sobic004G291200 Sobic004G291200 Sobic009G028100--Sobic004G291200 Sobic002G158500 Sobic002G158500 Sobic009G028100--Sobic002G158500 Sobic002G044000 Sobic002G044000 Sobic003G039200--Sobic002G044000 Sobic001G285300 Sobic001G285300 Sobic003G039200--Sobic001G285300 Sobic003G043400 Sobic003G043400 Sobic003G039200--Sobic003G043400 Sobic001G506000 Sobic001G506000 Sobic003G039200--Sobic001G506000 Sobic001G532100 Sobic001G532100 Sobic003G039200--Sobic001G532100 Sobic009G201800 Sobic009G201800 Sobic003G039200--Sobic009G201800 Sobic007G152400 Sobic007G152400 Sobic003G039200--Sobic007G152400 Sobic003G039200--Sobic008G058700 Sobic006G094600 Sobic006G094600 Sobic003G039200--Sobic006G094600 Sobic001G205800--Sobic008G170500 Sobic001G205800--Sobic001G385900 Sobic008G034300 Sobic008G034300 Sobic001G205800--Sobic008G034300 Sobic006G245500 Sobic006G245500 Sobic001G205800--Sobic006G245500 Sobic001G205800--Sobic010G221800 Sobic001G205800--Sobic010G164400 Sobic003G128700 Sobic003G128700 Sobic001G205800--Sobic003G128700 Sobic003G386800 Sobic003G386800 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900
Octagon: transcription factors


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