Gene annotation
Transcriptome id Sobic.007G020100.1
Synonym ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, Sb07g001740, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5YMD9
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g31480.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027043 , Zm00025a040297 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a040298 , Zm00025a040299 , Zm00025a055602 , Zm00025a040300 , Zm00025a053441
Brachypodium KQJ96857 , KQK23578
Barley HORVU5Hr1G106500.5 , HORVU5Hr1G121370.2 , HORVU5Hr1G121370.1 , HORVU4Hr1G072440.1 , HORVU4Hr1G072580.3 , HORVU7Hr1G092600.3 , HORVU4Hr1G072410.1 , HORVU4Hr1G072580.4 , HORVU5Hr1G106500.6 , HORVU5Hr1G106500.4 , HORVU5Hr1G106500.2 , HORVU5Hr1G106500.1 , HORVU5Hr1G119860.1 , HORVU5Hr1G119860.2 , HORVU4Hr1G072400.1 , HORVU4Hr1G072580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU4Hr1G072580.1 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7
Wheat TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS4A02G339200 , TraesCS4D02G270500 , TraesCS5B02G528500 , TraesCS4B02G271100 , TraesCS4B02G271300 , TraesCS5A02G443400 , TraesCS4D02G271800 , TraesCS4B02G272700 , TraesCS4B02G272800 , TraesCS5D02G527700 , TraesCS1B02G156700 , TraesCS5B02G528400 , TraesCS4D02G271900 , TraesCS5B02G548500 , TraesCS4A02G034300 , TraesCS5B02G448000 , TraesCS5D02G450900 , TraesCS1A02G406900 , TraesCS4D02G271700 , TraesCS5D02G535500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4A02G032600 , TraesCS4D02G270400 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS4A02G345000 , TraesCS3A02G165600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G019900 expansin precursor, putative, expressed -
2 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
3 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.001G237800 expansin precursor, putative, expressed -
5 Sobic.006G119000 X8 domain containing protein, expressed -
6 Sobic.009G210400 heavy metal-associated domain containing protein, expressed -
7 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
8 Sobic.001G314600 expansin precursor, putative, expressed -
9 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
10 Sobic.005G127400 expressed protein -
11 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
12 Sobic.006G100501 - -
13 Sobic.003G349400 expressed protein -
14 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
15 Sobic.004G110200 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.007G085500 glycosyl hydrolases family 16, putative, expressed -
17 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.010G234500 O-methyltransferase, putative, expressed -
19 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.002G068000 expressed protein -


Gene co-expression network
sample Sobic007G020100 Sobic007G020100 Sobic007G019900 Sobic007G019900 Sobic007G020100--Sobic007G019900 Sobic010G162800 Sobic010G162800 Sobic007G020100--Sobic010G162800 Sobic002G003700 Sobic002G003700 Sobic007G020100--Sobic002G003700 Sobic001G237800 Sobic001G237800 Sobic007G020100--Sobic001G237800 Sobic006G119000 Sobic006G119000 Sobic007G020100--Sobic006G119000 Sobic009G210400 Sobic009G210400 Sobic007G020100--Sobic009G210400 Sobic009G035900 Sobic009G035900 Sobic007G020100--Sobic009G035900 Sobic001G314600 Sobic001G314600 Sobic007G020100--Sobic001G314600 Sobic003G132400 Sobic003G132400 Sobic007G020100--Sobic003G132400 Sobic006G135500 Sobic006G135500 Sobic007G019900--Sobic006G135500 Sobic008G145900 Sobic008G145900 Sobic007G019900--Sobic008G145900 Sobic001G238100 Sobic001G238100 Sobic007G019900--Sobic001G238100 Sobic010G139100 Sobic010G139100 Sobic007G019900--Sobic010G139100 Sobic002G392100 Sobic002G392100 Sobic007G019900--Sobic002G392100 Sobic005G216700 Sobic005G216700 Sobic007G019900--Sobic005G216700 Sobic002G068000 Sobic002G068000 Sobic007G019900--Sobic002G068000 Sobic009G032900 Sobic009G032900 Sobic007G019900--Sobic009G032900 Sobic002G334000 Sobic002G334000 Sobic007G019900--Sobic002G334000 Sobic010G162800--Sobic001G237800 Sobic001G238000 Sobic001G238000 Sobic010G162800--Sobic001G238000 Sobic003G064800 Sobic003G064800 Sobic010G162800--Sobic003G064800 Sobic001G238200 Sobic001G238200 Sobic010G162800--Sobic001G238200 Sobic010G234500 Sobic010G234500 Sobic010G162800--Sobic010G234500 Sobic009G219200 Sobic009G219200 Sobic010G162800--Sobic009G219200 Sobic005G127400 Sobic005G127400 Sobic010G162800--Sobic005G127400 Sobic003G349400 Sobic003G349400 Sobic010G162800--Sobic003G349400 Sobic004G306900 Sobic004G306900 Sobic010G162800--Sobic004G306900 Sobic006G150100 Sobic006G150100 Sobic002G003700--Sobic006G150100 Sobic004G110700 Sobic004G110700 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic006G170600 Sobic006G170600 Sobic002G003700--Sobic006G170600 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic001G237800--Sobic009G219200 Sobic001G237800--Sobic010G162800 Sobic003G140700 Sobic003G140700 Sobic001G237800--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G237800--Sobic002G255000 Sobic001G237800--Sobic005G127400 Sobic001G237800--Sobic001G238000 Sobic001G237800--Sobic003G064800 Sobic001G237800--Sobic001G238200 Sobic001G237800--Sobic009G035900 Sobic006G030200 Sobic006G030200 Sobic006G119000--Sobic006G030200 Sobic001G295000 Sobic001G295000 Sobic006G119000--Sobic001G295000 Sobic003G307400 Sobic003G307400 Sobic006G119000--Sobic003G307400 Sobic003G121000 Sobic003G121000 Sobic006G119000--Sobic003G121000 Sobic001G314000 Sobic001G314000 Sobic006G119000--Sobic001G314000 Sobic003G236600 Sobic003G236600 Sobic006G119000--Sobic003G236600 Sobic001G245800 Sobic001G245800 Sobic006G119000--Sobic001G245800 Sobic001G514300 Sobic001G514300 Sobic006G119000--Sobic001G514300 Sobic008G135300 Sobic008G135300 Sobic006G119000--Sobic008G135300 Sobic009G210400--Sobic007G020100 Sobic009G210400--Sobic006G030200 Sobic009G210400--Sobic001G314000 Sobic003G246300 Sobic003G246300 Sobic009G210400--Sobic003G246300 Sobic004G323000 Sobic004G323000 Sobic009G210400--Sobic004G323000 Sobic009G210400--Sobic006G119000 Sobic005G231300 Sobic005G231300 Sobic009G210400--Sobic005G231300 Sobic010G176800 Sobic010G176800 Sobic009G210400--Sobic010G176800 Sobic009G210400--Sobic006G135500 Sobic009G035900--Sobic001G237800 Sobic009G035900--Sobic005G127400 Sobic009G035900--Sobic006G150100 Sobic009G035900--Sobic003G349400 Sobic009G035900--Sobic003G132400 Sobic009G035900--Sobic006G170600 Sobic008G121900 Sobic008G121900 Sobic009G035900--Sobic008G121900 Sobic009G035900--Sobic002G003700 Sobic009G035900--Sobic010G162800 Sobic003G059000 Sobic003G059000 Sobic001G314600--Sobic003G059000 Sobic010G006200 Sobic010G006200 Sobic001G314600--Sobic010G006200 Sobic001G314600--Sobic003G132400 Sobic001G314600--Sobic002G122400 Sobic001G314600--Sobic002G003700 Sobic001G314600--Sobic006G150100 Sobic001G314600--Sobic009G035900 Sobic001G314600--Sobic003G349400 Sobic001G314600--Sobic007G019900 Sobic001G318300 Sobic001G318300 Sobic003G132400--Sobic001G318300 Sobic003G132400--Sobic002G003700 Sobic002G329200 Sobic002G329200 Sobic003G132400--Sobic002G329200 Sobic003G132400--Sobic006G150100 Sobic003G132400--Sobic005G127400 Sobic003G132400--Sobic009G035900 Sobic003G132400--Sobic003G059000 Sobic003G132400--Sobic003G349400 Sobic003G132400--Sobic006G170600
Octagon: transcription factors


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