Gene annotation
Transcriptome id Sobic.007G045500.1
Synonym Sb07g003750, ATPS3, PS3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter, major facilitator family, putative, expressed
UniProt C5YH00
Pfam PF07690
Panther DB PTHR11662 PTHR11662:SF302
NCBI CDD KOG2533; Permease of the major facilitator superfamily
KEGG Orthology K13783; MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G47420 : phosphate starvation-induced gene 3
RAP-DB (Rice) LOC_Os08g06010.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a055165 , Zm00025a030093
Brachypodium KQJ95342
Barley HORVU7Hr1G071290.1 , HORVU7Hr1G071290.2 , HORVU7Hr1G071290.4 , HORVU7Hr1G071290.5 , HORVU7Hr1G071290.3
Wheat TraesCS7B02G201500 , TraesCS7B02G201500 , TraesCS7B02G201500 , TraesCS7A02G300800 , TraesCS7A02G300800 , TraesCS7D02G296500
Populus -


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cDNA sequences
Sobic.007G045500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G227900 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.009G069500 histidine-containing phosphotransfer protein 4, putative, expressed K14490: histidine-containing phosphotransfer peotein
3 Sobic.001G083701 - -
4 Sobic.004G130600 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
5 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G157300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
8 Sobic.002G324700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
9 Sobic.001G184300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
10 Sobic.003G192400 resistance-related receptor-like kinase, putative, expressed -
11 Sobic.004G227600 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
12 Sobic.001G374400 Heavy metal transport/detoxification superfamily protein(PubMedID : 26465154)@heavy metal-associated domain containing protein, expressed -
13 Sobic.003G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G347520 - -
15 Sobic.003G050800 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed K15283: solute carrier family 35, member E1
16 Sobic.009G041400 rp1, putative, expressed -
17 Sobic.001G531600 expressed protein -
18 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
19 Sobic.004G086150 - -
20 Sobic.010G254300 Myb-like DNA-binding domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G045500 Sobic007G045500 Sobic010G227900 Sobic010G227900 Sobic007G045500--Sobic010G227900 Sobic009G069500 Sobic009G069500 Sobic007G045500--Sobic009G069500 Sobic001G083701 Sobic001G083701 Sobic007G045500--Sobic001G083701 Sobic004G130600 Sobic004G130600 Sobic007G045500--Sobic004G130600 Sobic001G540300 Sobic001G540300 Sobic007G045500--Sobic001G540300 Sobic010G157300 Sobic010G157300 Sobic007G045500--Sobic010G157300 Sobic001G298400 Sobic001G298400 Sobic007G045500--Sobic001G298400 Sobic002G324700 Sobic002G324700 Sobic007G045500--Sobic002G324700 Sobic001G184300 Sobic001G184300 Sobic007G045500--Sobic001G184300 Sobic010G227900--Sobic001G540300 Sobic010G104800 Sobic010G104800 Sobic010G227900--Sobic010G104800 Sobic001G073300 Sobic001G073300 Sobic010G227900--Sobic001G073300 Sobic009G048900 Sobic009G048900 Sobic010G227900--Sobic009G048900 Sobic009G256100 Sobic009G256100 Sobic010G227900--Sobic009G256100 Sobic002G390100 Sobic002G390100 Sobic010G227900--Sobic002G390100 Sobic004G215800 Sobic004G215800 Sobic010G227900--Sobic004G215800 Sobic004G112100 Sobic004G112100 Sobic010G227900--Sobic004G112100 Sobic006G153400 Sobic006G153400 Sobic010G227900--Sobic006G153400 Sobic001G093500 Sobic001G093500 Sobic009G069500--Sobic001G093500 Sobic005G039600 Sobic005G039600 Sobic009G069500--Sobic005G039600 Sobic006G162200 Sobic006G162200 Sobic009G069500--Sobic006G162200 Sobic001G000800 Sobic001G000800 Sobic009G069500--Sobic001G000800 Sobic005G013800 Sobic005G013800 Sobic009G069500--Sobic005G013800 Sobic003G235500 Sobic003G235500 Sobic009G069500--Sobic003G235500 Sobic006G101600 Sobic006G101600 Sobic009G069500--Sobic006G101600 Sobic002G328800 Sobic002G328800 Sobic009G069500--Sobic002G328800 Sobic004G353700 Sobic004G353700 Sobic009G069500--Sobic004G353700 Sobic001G083701--Sobic010G157300 Sobic009G137300 Sobic009G137300 Sobic001G083701--Sobic009G137300 Sobic010G218200 Sobic010G218200 Sobic001G083701--Sobic010G218200 Sobic001G536901 Sobic001G536901 Sobic001G083701--Sobic001G536901 Sobic002G025600 Sobic002G025600 Sobic001G083701--Sobic002G025600 Sobic006G093100 Sobic006G093100 Sobic001G083701--Sobic006G093100 Sobic009G242100 Sobic009G242100 Sobic001G083701--Sobic009G242100 Sobic002G232200 Sobic002G232200 Sobic001G083701--Sobic002G232200 Sobic001G083701--Sobic002G390100 Sobic004G130600--Sobic010G104800 Sobic004G130600--Sobic001G073300 Sobic001G043000 Sobic001G043000 Sobic004G130600--Sobic001G043000 Sobic001G244600 Sobic001G244600 Sobic004G130600--Sobic001G244600 Sobic004G130600--Sobic009G256100 Sobic004G130600--Sobic002G390100 Sobic004G323800 Sobic004G323800 Sobic004G130600--Sobic004G323800 Sobic006G161500 Sobic006G161500 Sobic004G130600--Sobic006G161500 Sobic003G355200 Sobic003G355200 Sobic004G130600--Sobic003G355200 Sobic001G540300--Sobic009G048900 Sobic008G140200 Sobic008G140200 Sobic001G540300--Sobic008G140200 Sobic001G540300--Sobic004G112100 Sobic001G540300--Sobic010G104800 Sobic001G446100 Sobic001G446100 Sobic001G540300--Sobic001G446100 Sobic001G540300--Sobic009G256100 Sobic001G540300--Sobic001G073300 Sobic001G540300--Sobic004G215800 Sobic010G039500 Sobic010G039500 Sobic001G540300--Sobic010G039500 Sobic002G408100 Sobic002G408100 Sobic010G157300--Sobic002G408100 Sobic010G157300--Sobic009G242100 Sobic002G049600 Sobic002G049600 Sobic010G157300--Sobic002G049600 Sobic003G426700 Sobic003G426700 Sobic010G157300--Sobic003G426700 Sobic003G342100 Sobic003G342100 Sobic010G157300--Sobic003G342100 Sobic010G157300--Sobic002G390100 Sobic010G157300--Sobic001G540300 Sobic002G237900 Sobic002G237900 Sobic010G157300--Sobic002G237900 Sobic003G036200 Sobic003G036200 Sobic010G157300--Sobic003G036200 Sobic001G298400--Sobic010G104800 Sobic001G298400--Sobic001G073300 Sobic001G331500 Sobic001G331500 Sobic001G298400--Sobic001G331500 Sobic001G298400--Sobic009G256100 Sobic003G314000 Sobic003G314000 Sobic001G298400--Sobic003G314000 Sobic002G119100 Sobic002G119100 Sobic001G298400--Sobic002G119100 Sobic004G165500 Sobic004G165500 Sobic001G298400--Sobic004G165500 Sobic001G298400--Sobic010G218200 Sobic002G404800 Sobic002G404800 Sobic001G298400--Sobic002G404800 Sobic001G374400 Sobic001G374400 Sobic002G324700--Sobic001G374400 Sobic008G047100 Sobic008G047100 Sobic002G324700--Sobic008G047100 Sobic004G186800 Sobic004G186800 Sobic002G324700--Sobic004G186800 Sobic003G139700 Sobic003G139700 Sobic002G324700--Sobic003G139700 Sobic004G111200 Sobic004G111200 Sobic002G324700--Sobic004G111200 Sobic001G087800 Sobic001G087800 Sobic002G324700--Sobic001G087800 Sobic009G152800 Sobic009G152800 Sobic002G324700--Sobic009G152800 Sobic001G176700 Sobic001G176700 Sobic002G324700--Sobic001G176700 Sobic003G064901 Sobic003G064901 Sobic002G324700--Sobic003G064901 Sobic009G041400 Sobic009G041400 Sobic001G184300--Sobic009G041400 Sobic004G107500 Sobic004G107500 Sobic001G184300--Sobic004G107500 Sobic003G137200 Sobic003G137200 Sobic001G184300--Sobic003G137200 Sobic003G133700 Sobic003G133700 Sobic001G184300--Sobic003G133700 Sobic004G227600 Sobic004G227600 Sobic001G184300--Sobic004G227600 Sobic006G074500 Sobic006G074500 Sobic001G184300--Sobic006G074500 Sobic001G184300--Sobic006G101600 Sobic003G050800 Sobic003G050800 Sobic001G184300--Sobic003G050800 Sobic010G261500 Sobic010G261500 Sobic001G184300--Sobic010G261500
Octagon: transcription factors


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